RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 AK8Q96MA6 479 aa9.57□□□□□ -0.88
USP30-206ENST00000479219 SAMSN1Q9NSI8 373 aaKnown RBP9.57□□□□□ -0.88
USP30-206ENST00000479219 BARHL2Q9NY43 387 aa9.57□□□□□ -0.88
USP30-206ENST00000479219 ADD3Q9UEY8 706 aaKnown RBP9.57□□□□□ -0.88
USP30-206ENST00000479219 PPP1R3GB7ZBB8 358 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 HOXA7P31268 230 aaPredicted RBP9.56□□□□□ -0.88
USP30-206ENST00000479219 STAT6P42226 847 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 ST5P78524 1137 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 PAK1Q13153 545 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 STIM1Q13586 685 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 TUBB2AQ13885 445 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 SH3RF3Q8TEJ3 882 aaPredicted RBP9.56□□□□□ -0.88
USP30-206ENST00000479219 TUBB2BQ9BVA1 445 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 ARGLU1Q9NWB6 273 aaPredicted RBP9.56□□□□□ -0.88
USP30-206ENST00000479219 LIMA1Q9UHB6 759 aaKnown RBP9.56□□□□□ -0.88
USP30-206ENST00000479219 LRRC37AA6NMS7 1700 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 LRRC10BA6NIK2 292 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 M0R2N6 131 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 CHRM1P11229 460 aaPredicted RBP9.56□□□□□ -0.88
USP30-206ENST00000479219 MYH8P13535 1937 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 PBX1P40424 430 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 TUBB4BP68371 445 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 KCNB1Q14721 858 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 CRY2Q49AN0 593 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 TRIM65Q6PJ69 517 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 KRT25Q7Z3Z0 450 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 TXNRD3Q86VQ6 643 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 MNS1Q8NEH6 495 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 CCDC47Q96A33 483 aaKnown RBP9.56□□□□□ -0.88
USP30-206ENST00000479219 FAM163AQ96GL9 167 aaPredicted RBP9.56□□□□□ -0.88
USP30-206ENST00000479219 CCSER1Q9C0I3 900 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 DISC1Q9NRI5 854 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 IL17RBQ9NRM6 502 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 MAD2L2Q9UI95 211 aa9.56□□□□□ -0.88
USP30-206ENST00000479219 BAZ2BQ9UIF8 2168 aaKnown RBP9.56□□□□□ -0.88
USP30-206ENST00000479219 GPR75-ASB3A0A0A6YYF3 556 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 PALM3A6NDB9 673 aaPredicted RBP9.55□□□□□ -0.88
USP30-206ENST00000479219 EFCAB8A8MWE9 144 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 RPN1P04843 607 aaKnown RBP9.55□□□□□ -0.88
USP30-206ENST00000479219 IL1R1P14778 569 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 GNA11P29992 359 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 WWC2Q6AWC2 1192 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 C16orf86Q6ZW13 317 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 APTXQ7Z2E3 356 aaKnown RBP9.55□□□□□ -0.88
USP30-206ENST00000479219 IGSF22Q8N9C0 903 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 RBM17Q96I25 401 aaKnown RBP9.55□□□□□ -0.88
USP30-206ENST00000479219 C10orf71Q711Q0 1435 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 KCNA4P22459 653 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 CASQ1P31415 396 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 KCNQ4P56696 695 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 NFIXQ14938 502 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 TEX35Q5T0J7 233 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 KLHL10Q6JEL2 608 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 C4orf32Q8N8J7 132 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 NOC3LQ8WTT2 800 aaKnown RBP9.55□□□□□ -0.88
USP30-206ENST00000479219 MED15Q96RN5 788 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 RTFDC1Q9BY42 306 aaPredicted RBP9.55□□□□□ -0.88
USP30-206ENST00000479219 ST7Q9NRC1 585 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 USP21Q9UK80 565 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 H7C1D1 291 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 BBOX1O75936 387 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 CD44P16070 742 aaKnown RBP9.55□□□□□ -0.88
USP30-206ENST00000479219 FECHP22830 423 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 RRAGBQ5VZM2 374 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 NEDD1Q8NHV4 660 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 UBXN4Q92575 508 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 ZMYND12Q9H0C1 365 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 C6orf50Q9HD87 102 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 SEC63Q9UGP8 760 aaKnown RBP9.55□□□□□ -0.88
USP30-206ENST00000479219 GGA1Q9UJY5 639 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 CTNND2Q9UQB3 1225 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 FHOD1Q9Y613 1164 aa9.55□□□□□ -0.88
USP30-206ENST00000479219 PLIN4Q96Q06 1357 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 VGLL3A8MV65 326 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 STXBP3O00186 592 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 WNT7AO00755 349 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 MFAP3LO75121 409 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 PARP1P09874 1014 aaKnown RBP9.54□□□□□ -0.88
USP30-206ENST00000479219 PNMA6AP0CW24 399 aaPredicted RBP9.54□□□□□ -0.88
USP30-206ENST00000479219 RASA1P20936 1047 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 UBA7P41226 1012 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 HEATR3Q7Z4Q2 680 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 TMTC1Q8IUR5 882 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 RASSF8Q8NHQ8 419 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 TGFBRAP1Q8WUH2 860 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 RRP36Q96EU6 259 aaKnown RBP9.54□□□□□ -0.88
USP30-206ENST00000479219 TMEM47Q9BQJ4 181 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 PCDHA6Q9UN73 950 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 SUGT1Q9Y2Z0 365 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 PCDHA8Q9Y5H6 950 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 ESYT2A0FGR8 921 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 EEF1GP26641 437 aaKnown RBP9.54□□□□□ -0.88
USP30-206ENST00000479219 BTDP43251 543 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 CLCN6P51797 869 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 ADKP55263 362 aaKnown RBP9.54□□□□□ -0.88
USP30-206ENST00000479219 ERCC6LQ2NKX8 1250 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 CD209Q9NNX6 404 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.54□□□□□ -0.88
USP30-206ENST00000479219 STX8Q9UNK0 236 aa9.54□□□□□ -0.88
USP30-206ENST00000479219 TTF2Q9UNY4 1162 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms