RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 UACAQ9BZF9 1416 aa5.9□□□□□ -1.47
GPNMB-210ENST00000478451 ADGBQ8N7X0 1667 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 ITSN2Q9NZM3 1697 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 DNAJC25-GNG10A0A024R161 153 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 CCER2I3L3R5 266 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 TNFRSF10CO14798 259 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 NME1P15531 152 aaKnown RBP5.89□□□□□ -1.47
GPNMB-210ENST00000478451 TCF3P15923 654 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 CCNFP41002 786 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 HDLBPQ00341 1268 aaKnown RBP5.89□□□□□ -1.47
GPNMB-210ENST00000478451 EGR3Q06889 387 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 RAD51AP2Q09MP3 1159 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 KCNMB1Q16558 191 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 RALGPS1Q5JS13 557 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 METTL16Q86W50 562 aaKnown RBP5.89□□□□□ -1.47
GPNMB-210ENST00000478451 ZNF654Q8IZM8 581 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 TOX2Q96NM4 488 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 TMEM59LQ9UK28 342 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 PCDHA11Q9Y5I1 949 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 MYOM3Q5VTT5 1437 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 AKNAQ7Z591 1439 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 GRIN2BQ13224 1484 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 UGGT2Q9NYU1 1516 aa5.89□□□□□ -1.47
GPNMB-210ENST00000478451 NESP48681 1621 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 CLEC3AO75596 197 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 IMPDH2P12268 514 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 NMIQ13287 307 aaPredicted RBP5.88□□□□□ -1.47
GPNMB-210ENST00000478451 CLEC16AQ2KHT3 1053 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 NBPF12Q5TAG4 269 aaPredicted RBP5.88□□□□□ -1.47
GPNMB-210ENST00000478451 FYB2Q5VWT5 728 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 TTC6Q86TZ1 520 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 KIRREL1Q96J84 757 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 FERD3LQ96RJ6 166 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 ASCC2Q9H1I8 757 aaPredicted RBP5.88□□□□□ -1.47
GPNMB-210ENST00000478451 PDS5BQ9NTI5 1447 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 RAD54L2Q9Y4B4 1467 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 IQGAP2Q13576 1575 aa5.88□□□□□ -1.47
GPNMB-210ENST00000478451 ANP32CO43423 234 aa5.87□□□□□ -1.47
GPNMB-210ENST00000478451 PAK2Q13177 524 aa5.87□□□□□ -1.47
GPNMB-210ENST00000478451 NBPF9Q3BBW0 867 aa5.87□□□□□ -1.47
GPNMB-210ENST00000478451 ZNF512BQ96KM6 892 aaPredicted RBP5.87□□□□□ -1.47
GPNMB-210ENST00000478451 SLC6A18Q96N87 628 aa5.87□□□□□ -1.47
GPNMB-210ENST00000478451 HDAC8Q9BY41 377 aa5.87□□□□□ -1.47
GPNMB-210ENST00000478451 TCOF1Q13428 1488 aaKnown RBP5.87□□□□□ -1.47
GPNMB-210ENST00000478451 GAPVD1Q14C86 1478 aa5.87□□□□□ -1.47
GPNMB-210ENST00000478451 NCOA2Q15596 1464 aa5.87□□□□□ -1.47
GPNMB-210ENST00000478451 ARHGEF11O15085 1522 aa5.87□□□□□ -1.47
GPNMB-210ENST00000478451 TARBP1Q13395 1621 aaKnown RBP5.87□□□□□ -1.47
GPNMB-210ENST00000478451 ADAMTS12P58397 1594 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 URB2Q14146 1524 aaKnown RBP5.86□□□□□ -1.47
GPNMB-210ENST00000478451 GLI1P08151 1106 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 RAC2P15153 192 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 HK2P52789 917 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 TTLL10Q6ZVT0 673 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 TMC3Q7Z5M5 1100 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 NT5DC4Q86YG4 428 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 TMEM192Q8IY95 271 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 ZSCAN18Q8TBC5 510 aaPredicted RBP5.86□□□□□ -1.47
GPNMB-210ENST00000478451 ENOX1Q8TC92 643 aaKnown RBP5.86□□□□□ -1.47
GPNMB-210ENST00000478451 SYTL5Q8TDW5 730 aaPredicted RBP5.86□□□□□ -1.47
GPNMB-210ENST00000478451 SLC9A7Q96T83 725 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 MKRN2Q9H000 416 aaKnown RBP5.86□□□□□ -1.47
GPNMB-210ENST00000478451 ADAMTS10Q9H324 1103 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 PPT2Q9UMR5 302 aa5.86□□□□□ -1.47
GPNMB-210ENST00000478451 ZNF503-AS2A6NEH8 195 aa5.85□□□□□ -1.47
GPNMB-210ENST00000478451 FAM86C2PA6NEL3 165 aa5.85□□□□□ -1.47
GPNMB-210ENST00000478451 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.85□□□□□ -1.47
GPNMB-210ENST00000478451 ACRP10323 421 aa5.85□□□□□ -1.47
GPNMB-210ENST00000478451 TEKQ02763 1124 aa5.85□□□□□ -1.47
GPNMB-210ENST00000478451 SNW1Q13573 536 aaKnown RBP5.85□□□□□ -1.47
GPNMB-210ENST00000478451 TMEM67Q5HYA8 995 aa5.85□□□□□ -1.47
GPNMB-210ENST00000478451 FBXW10Q5XX13 1052 aa5.85□□□□□ -1.47
GPNMB-210ENST00000478451 TAB3Q8N5C8 712 aaPredicted RBP5.85□□□□□ -1.47
GPNMB-210ENST00000478451 FAM84AQ96KN4 292 aa5.85□□□□□ -1.47
GPNMB-210ENST00000478451 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.85□□□□□ -1.47
GPNMB-210ENST00000478451 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.85□□□□□ -1.47
GPNMB-210ENST00000478451 DNMT1P26358 1616 aaKnown RBP5.85□□□□□ -1.47
GPNMB-210ENST00000478451 MIA2Q96PC5 1412 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 HPXP02790 462 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 ZGLP1P0C6A0 271 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 ERVFC1P60507 584 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 COL9A2Q14055 689 aaPredicted RBP5.84□□□□□ -1.47
GPNMB-210ENST00000478451 INTS3Q68E01 1043 aaKnown RBP5.84□□□□□ -1.47
GPNMB-210ENST00000478451 DAGLBQ8NCG7 672 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 ABHD4Q8TB40 342 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 DHX38Q92620 1227 aaKnown RBP5.84□□□□□ -1.47
GPNMB-210ENST00000478451 SYTL4Q96C24 671 aaPredicted RBP5.84□□□□□ -1.47
GPNMB-210ENST00000478451 GPRASP2Q96D09 838 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 LIN37Q96GY3 246 aaPredicted RBP5.84□□□□□ -1.47
GPNMB-210ENST00000478451 SPATA32Q96LK8 384 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 TM9SF2Q99805 663 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 PRDM14Q9GZV8 571 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 GINM1Q9NU53 330 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 CROCC2H7BZ55 1655 aa5.84□□□□□ -1.47
GPNMB-210ENST00000478451 WDR62O43379 1518 aa5.84□□□□□ -1.48
GPNMB-210ENST00000478451 NAIPQ13075 1403 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 LRRC10BA6NIK2 292 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 SIGLEC6O43699 453 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 PRAMEF1O95521 474 aa5.83□□□□□ -1.48
GPNMB-210ENST00000478451 CFPP27918 469 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms