RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CAMTA2O94983 1202 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 TNIP1Q15025 636 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 CNNM4Q6P4Q7 775 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 CLEC4GQ6UXB4 293 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 TMTC3Q6ZXV5 915 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 CPXCR1Q8N123 301 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 STAG2Q8N3U4 1231 aa12.33□□□□□ -0.44
COL27A1-204ENST00000477421 GTPBP6O43824 516 aaPredicted RBP12.32□□□□□ -0.44
COL27A1-204ENST00000477421 TUBB4AP04350 444 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 CDC25BP30305 580 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 RRAGAQ7L523 313 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 TRIML1Q8N9V2 468 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 EHBP1Q8NDI1 1231 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 ACRBPQ8NEB7 543 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 OR8K1Q8NGG5 319 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 TBCKQ8TEA7 893 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 CYP4A11Q02928 519 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 CUL4BQ13620 913 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
COL27A1-204ENST00000477421 SARM1Q6SZW1 724 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 EPC1Q9H2F5 836 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 MROH7-TTC4A0A0A0MT08 1334 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 B4DLN1 442 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 TEX33O43247 280 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 APBA3O96018 575 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 VSTM4Q8IW00 320 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 IFT81Q8WYA0 676 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 SPTLC3Q9NUV7 552 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 PCDHA12Q9UN75 941 aa12.32□□□□□ -0.44
COL27A1-204ENST00000477421 SEC31AO94979 1220 aaKnown RBP12.31□□□□□ -0.44
COL27A1-204ENST00000477421 ALX1Q15699 326 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 ENOX1Q8TC92 643 aaKnown RBP12.31□□□□□ -0.44
COL27A1-204ENST00000477421 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 JAKMIP2Q96AA8 810 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 CCDC113Q9H0I3 377 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 RABEP2Q9H5N1 569 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 PSTPIP2Q9H939 334 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 POLD4Q9HCU8 107 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 TRIM49BA6NDI0 452 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 STX10O60499 249 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 RPS6KA4O75676 772 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 COPB1P53618 953 aaKnown RBP12.31□□□□□ -0.44
COL27A1-204ENST00000477421 ARMCX5Q6P1M9 558 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 RDH13Q8NBN7 331 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 ENGASEQ8NFI3 743 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 TEKT1Q969V4 418 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 PCDHA4Q9UN74 947 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 PSDA5PKW4 1024 aaPredicted RBP12.31□□□□□ -0.44
COL27A1-204ENST00000477421 FAM13AO94988 1023 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 PRR16Q569H4 304 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 CLEC10AQ8IUN9 316 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 CCDC65Q8IXS2 484 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
COL27A1-204ENST00000477421 NARFQ9UHQ1 456 aa12.31□□□□□ -0.44
COL27A1-204ENST00000477421 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 UBE2SQ16763 222 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 BRIP1Q9BX63 1249 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 LEMD3Q9Y2U8 911 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 ERCC5P28715 1186 aaPredicted RBP12.3□□□□□ -0.44
COL27A1-204ENST00000477421 CDK8P49336 464 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 SNAP25P60880 206 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 NCBP1Q09161 790 aaKnown RBP12.3□□□□□ -0.44
COL27A1-204ENST00000477421 NFIXQ14938 502 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 MAATS1Q7Z4T9 603 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 IRX2Q9BZI1 471 aaPredicted RBP12.3□□□□□ -0.44
COL27A1-204ENST00000477421 SEMA3EO15041 775 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 CAPN2P17655 700 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 MAGEA1P43355 309 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 CDR1P51861 262 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 PCDHA1Q9Y5I3 950 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
COL27A1-204ENST00000477421 UBXN2AP68543 259 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 SLC35F6Q8N357 371 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 NSUN4Q96CB9 384 aaKnown RBP12.29□□□□□ -0.44
COL27A1-204ENST00000477421 TUBGCP2Q9BSJ2 902 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 ERLIN2O94905 339 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 NTSR2O95665 410 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 LONP1P36776 959 aaKnown RBP12.29□□□□□ -0.44
COL27A1-204ENST00000477421 FMR1Q06787 632 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL27A1-204ENST00000477421 MTF1Q14872 753 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL27A1-204ENST00000477421 EPN1Q9Y6I3 576 aaPredicted RBP12.29□□□□□ -0.44
COL27A1-204ENST00000477421 ZMYND10O75800 440 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
COL27A1-204ENST00000477421 GDF11O95390 407 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 PLCG1P19174 1290 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 CKAP4Q07065 602 aaKnown RBP12.29□□□□□ -0.44
COL27A1-204ENST00000477421 TOGARAM2Q6ZUX3 1019 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 LINC00116Q8NCU8 138 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 CTNNBL1Q8WYA6 563 aaPredicted RBP12.29□□□□□ -0.44
COL27A1-204ENST00000477421 LZTS2Q9BRK4 669 aa12.29□□□□□ -0.44
COL27A1-204ENST00000477421 SERPINB13Q9UIV8 391 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms