RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 TRMT1Q9NXH9 659 aaKnown RBP15.24■□□□□ 0.03
HDAC7-221ENST00000477203 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
HDAC7-221ENST00000477203 GAKO14976 1311 aa15.24■□□□□ 0.03
HDAC7-221ENST00000477203 SLX4Q8IY92 1834 aa15.24■□□□□ 0.03
HDAC7-221ENST00000477203 DDTLA6NHG4 134 aaPredicted RBP15.23■□□□□ 0.03
HDAC7-221ENST00000477203 IL17AQ16552 155 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 TMEM60Q9H2L4 133 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 STK32BQ9NY57 414 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 MAN1B1Q9UKM7 699 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
HDAC7-221ENST00000477203 LAMB1P07942 1786 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 KARSQ15046 597 aaKnown RBP15.23■□□□□ 0.03
HDAC7-221ENST00000477203 C16orf45Q96MC5 204 aaPredicted RBP15.23■□□□□ 0.03
HDAC7-221ENST00000477203 CDK5RAP2Q96SN8 1893 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 SMCO2A6NFE2 343 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 ERICH4A6NGS2 130 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 TNFRSF25Q93038 417 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 GJA10Q969M2 543 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 EEF2KMTQ96G04 330 aa15.23■□□□□ 0.03
HDAC7-221ENST00000477203 ZNF277Q9NRM2 450 aaPredicted RBP15.23■□□□□ 0.03
HDAC7-221ENST00000477203 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
HDAC7-221ENST00000477203 CFAP100Q494V2 611 aa15.22■□□□□ 0.03
HDAC7-221ENST00000477203 PALM3A6NDB9 673 aaPredicted RBP15.22■□□□□ 0.03
HDAC7-221ENST00000477203 FMR1Q06787 632 aaKnown RBP eCLIP15.22■□□□□ 0.03
HDAC7-221ENST00000477203 ZNF592Q92610 1267 aa15.22■□□□□ 0.03
HDAC7-221ENST00000477203 NUP88Q99567 741 aaPredicted RBP15.22■□□□□ 0.03
HDAC7-221ENST00000477203 TRIM34Q9BYJ4 488 aa15.22■□□□□ 0.03
HDAC7-221ENST00000477203 PCDHA4Q9UN74 947 aa15.22■□□□□ 0.03
HDAC7-221ENST00000477203 TCP10L2B9ZVM9 353 aa15.21■□□□□ 0.03
HDAC7-221ENST00000477203 STXBP3O00186 592 aa15.21■□□□□ 0.03
HDAC7-221ENST00000477203 TOP1P11387 765 aaKnown RBP15.21■□□□□ 0.03
HDAC7-221ENST00000477203 OSBPL5Q9H0X9 879 aaPredicted RBP15.21■□□□□ 0.03
HDAC7-221ENST00000477203 MTMR4Q9NYA4 1195 aa15.21■□□□□ 0.03
HDAC7-221ENST00000477203 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.21■□□□□ 0.03
HDAC7-221ENST00000477203 PCDHA6Q9UN73 950 aa15.21■□□□□ 0.03
HDAC7-221ENST00000477203 PCDHA8Q9Y5H6 950 aa15.21■□□□□ 0.03
HDAC7-221ENST00000477203 SCN9AQ15858 1988 aa15.21■□□□□ 0.03
HDAC7-221ENST00000477203 TMEM232C9JQI7 657 aa15.21■□□□□ 0.03
HDAC7-221ENST00000477203 IKQ13123 557 aaPredicted RBP15.21■□□□□ 0.03
HDAC7-221ENST00000477203 NCAPHQ15003 741 aa15.21■□□□□ 0.03
HDAC7-221ENST00000477203 ACTN4O43707 911 aaKnown RBP15.21■□□□□ 0.02
HDAC7-221ENST00000477203 CCNT1O60563 726 aaKnown RBP15.21■□□□□ 0.02
HDAC7-221ENST00000477203 ZBTB7AO95365 584 aa15.21■□□□□ 0.02
HDAC7-221ENST00000477203 UBE2SQ16763 222 aa15.21■□□□□ 0.02
HDAC7-221ENST00000477203 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.02
HDAC7-221ENST00000477203 FLAD1Q8NFF5 587 aa15.21■□□□□ 0.02
HDAC7-221ENST00000477203 RRP36Q96EU6 259 aaKnown RBP15.21■□□□□ 0.02
HDAC7-221ENST00000477203 PDHBP11177 359 aa15.2■□□□□ 0.02
HDAC7-221ENST00000477203 SHMT1P34896 483 aa15.2■□□□□ 0.02
HDAC7-221ENST00000477203 IRX5P78411 483 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-221ENST00000477203 FANCCQ00597 558 aa15.2■□□□□ 0.02
HDAC7-221ENST00000477203 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
HDAC7-221ENST00000477203 FAM163AQ96GL9 167 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-221ENST00000477203 MAST2Q6P0Q8 1798 aa15.2■□□□□ 0.02
HDAC7-221ENST00000477203 COL11A2P13942 1736 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-221ENST00000477203 DDX60LQ5H9U9 1706 aaKnown RBP15.2■□□□□ 0.02
HDAC7-221ENST00000477203 GNAQP50148 359 aa15.2■□□□□ 0.02
HDAC7-221ENST00000477203 PCNTO95613 3336 aa15.2■□□□□ 0.02
HDAC7-221ENST00000477203 HLA-DOAP06340 250 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 CALML3P27482 149 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 TMC4Q7Z404 712 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 KIAA1524Q8TCG1 905 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 PAGE5Q96GU1 130 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 PRMT6Q96LA8 375 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-221ENST00000477203 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 SAMSN1Q9NSI8 373 aaKnown RBP15.19■□□□□ 0.02
HDAC7-221ENST00000477203 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 TUBE1Q9UJT0 475 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-221ENST00000477203 CAVIN2O95810 425 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 UBASH3AP57075 661 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 MDM2Q00987 491 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-221ENST00000477203 DNAJC18Q9H819 358 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 NFE2L3Q9Y4A8 694 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 USP27XA6NNY8 438 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 USP17L10C9JJH3 530 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 TNNI2P48788 182 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 TPM4P67936 248 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 MYL5Q02045 173 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 SEPT2Q15019 361 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 ZYXQ15942 572 aaKnown RBP15.19■□□□□ 0.02
HDAC7-221ENST00000477203 DACT2Q5SW24 774 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 PODNQ7Z5L7 613 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 VEZTQ9HBM0 779 aa15.19■□□□□ 0.02
HDAC7-221ENST00000477203 HOOK1Q9UJC3 728 aaKnown RBP15.19■□□□□ 0.02
HDAC7-221ENST00000477203 ROBO3Q96MS0 1386 aa15.18■□□□□ 0.02
HDAC7-221ENST00000477203 YDJCA8MPS7 323 aa15.18■□□□□ 0.02
HDAC7-221ENST00000477203 SKILP12757 684 aa15.18■□□□□ 0.02
HDAC7-221ENST00000477203 ATP2C1P98194 919 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-221ENST00000477203 CUL4BQ13620 913 aa15.18■□□□□ 0.02
HDAC7-221ENST00000477203 ZFP91Q96JP5 570 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-221ENST00000477203 RBM26Q5T8P6 1007 aaKnown RBP15.18■□□□□ 0.02
HDAC7-221ENST00000477203 CDAN1Q8IWY9 1227 aa15.18■□□□□ 0.02
HDAC7-221ENST00000477203 HSD3B7Q9H2F3 369 aa15.18■□□□□ 0.02
HDAC7-221ENST00000477203 FAM198AQ9UFP1 575 aa15.18■□□□□ 0.02
HDAC7-221ENST00000477203 TECP42680 631 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 CCDC84Q86UT8 332 aaPredicted RBP15.17■□□□□ 0.02
HDAC7-221ENST00000477203 LARGE2Q8N3Y3 721 aa15.17■□□□□ 0.02
HDAC7-221ENST00000477203 TBCKQ8TEA7 893 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms