RNA–Protein interactions for RNA: ENST00000477002.1

CNTNAP3-209, Transcript of contactin associated protein like 3, humanhuman

TSL 5

Gene CNTNAP3, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-209ENST00000477002 CNGA1P29973 690 aa21.41■■□□□ 1.02
CNTNAP3-209ENST00000477002 IL17RBQ9NRM6 502 aa21.41■■□□□ 1.02
CNTNAP3-209ENST00000477002 STX8Q9UNK0 236 aa21.41■■□□□ 1.02
CNTNAP3-209ENST00000477002 CTDP1Q9Y5B0 961 aaPredicted RBP21.41■■□□□ 1.02
CNTNAP3-209ENST00000477002 ALPK3Q96L96 1907 aa21.4■■□□□ 1.02
CNTNAP3-209ENST00000477002 CYBAP13498 195 aa21.4■■□□□ 1.02
CNTNAP3-209ENST00000477002 HABP4Q5JVS0 413 aaKnown RBP21.4■■□□□ 1.02
CNTNAP3-209ENST00000477002 SNRNP48Q6IEG0 339 aaKnown RBP21.4■■□□□ 1.02
CNTNAP3-209ENST00000477002 KIFC2Q96AC6 838 aa21.4■■□□□ 1.02
CNTNAP3-209ENST00000477002 GMCL1Q96IK5 515 aa21.4■■□□□ 1.02
CNTNAP3-209ENST00000477002 MAML3Q96JK9 1138 aa21.4■■□□□ 1.02
CNTNAP3-209ENST00000477002 DDX20Q9UHI6 824 aaKnown RBP21.4■■□□□ 1.02
CNTNAP3-209ENST00000477002 TACC3Q9Y6A5 838 aa21.4■■□□□ 1.02
CNTNAP3-209ENST00000477002 PLXNA1Q9UIW2 1896 aa21.39■■□□□ 1.02
CNTNAP3-209ENST00000477002 HIP1O00291 1037 aa21.39■■□□□ 1.01
CNTNAP3-209ENST00000477002 TRPV1Q8NER1 839 aa21.39■■□□□ 1.01
CNTNAP3-209ENST00000477002 SLC38A10Q9HBR0 1119 aa21.39■■□□□ 1.01
CNTNAP3-209ENST00000477002 TOMM22Q9NS69 142 aa21.39■■□□□ 1.01
CNTNAP3-209ENST00000477002 DIAPH3Q9NSV4 1193 aa21.39■■□□□ 1.01
CNTNAP3-209ENST00000477002 COLQQ9Y215 455 aaPredicted RBP21.39■■□□□ 1.01
CNTNAP3-209ENST00000477002 DIS3Q9Y2L1 958 aaKnown RBP21.39■■□□□ 1.01
CNTNAP3-209ENST00000477002 NMT2O60551 498 aa21.38■■□□□ 1.01
CNTNAP3-209ENST00000477002 PGK2P07205 417 aa21.38■■□□□ 1.01
CNTNAP3-209ENST00000477002 FDX1P10109 184 aa21.38■■□□□ 1.01
CNTNAP3-209ENST00000477002 SLC1A4P43007 532 aa21.38■■□□□ 1.01
CNTNAP3-209ENST00000477002 TMEM232C9JQI7 657 aa21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 PCP11498 1178 aaKnown RBP21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 MCCP23508 829 aa21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 NOVP48745 357 aa21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 STAT2P52630 851 aa21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 OAZ1P54368 228 aa21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 CWC27Q6UX04 472 aaKnown RBP21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 FAM160B2Q86V87 743 aa21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 CPXCR1Q8N123 301 aa21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 CHURC1Q8WUH1 139 aa21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 ISY1Q9ULR0 285 aaKnown RBP21.37■■□□□ 1.01
CNTNAP3-209ENST00000477002 COL6A1P12109 1028 aa21.36■■□□□ 1.01
CNTNAP3-209ENST00000477002 ZNF792Q3KQV3 632 aa21.36■■□□□ 1.01
CNTNAP3-209ENST00000477002 RRP12Q5JTH9 1297 aaKnown RBP21.36■■□□□ 1.01
CNTNAP3-209ENST00000477002 STAG1Q8WVM7 1258 aa21.36■■□□□ 1.01
CNTNAP3-209ENST00000477002 RAVER2Q9HCJ3 691 aaKnown RBP21.36■■□□□ 1.01
CNTNAP3-209ENST00000477002 TCP11L1Q9NUJ3 509 aa21.36■■□□□ 1.01
CNTNAP3-209ENST00000477002 NRBP1Q9UHY1 535 aa21.36■■□□□ 1.01
CNTNAP3-209ENST00000477002 RIPK3Q9Y572 518 aa21.36■■□□□ 1.01
CNTNAP3-209ENST00000477002 PFASO15067 1338 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 SEPT4O43236 478 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 PLA2G6O60733 806 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 SLC4A3P48751 1232 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 HAND2P61296 217 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 IKQ13123 557 aaPredicted RBP21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 AKNAD1Q5T1N1 836 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 RCSD1Q6JBY9 416 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 CHRDL2Q6WN34 429 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 MFSD6Q6ZSS7 791 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 DDX11Q96FC9 970 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 RNF41Q9H4P4 317 aaPredicted RBP21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 FBXO40Q9UH90 709 aa21.35■■□□□ 1.01
CNTNAP3-209ENST00000477002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.34■■□□□ 1.01
CNTNAP3-209ENST00000477002 CHST13Q8NET6 341 aa21.34■■□□□ 1.01
CNTNAP3-209ENST00000477002 TINF2Q9BSI4 451 aa21.34■■□□□ 1.01
CNTNAP3-209ENST00000477002 ZNF213O14771 459 aa21.33■■□□□ 1.01
CNTNAP3-209ENST00000477002 TOP1P11387 765 aaKnown RBP21.33■■□□□ 1.01
CNTNAP3-209ENST00000477002 PDE4AP27815 886 aa21.33■■□□□ 1.01
CNTNAP3-209ENST00000477002 PRAMEF19Q5SWL8 479 aa21.33■■□□□ 1.01
CNTNAP3-209ENST00000477002 KCTD1Q719H9 257 aa21.33■■□□□ 1.01
CNTNAP3-209ENST00000477002 C7orf61Q8IZ16 206 aa21.33■■□□□ 1.01
CNTNAP3-209ENST00000477002 MSL3Q8N5Y2 521 aaKnown RBP21.33■■□□□ 1.01
CNTNAP3-209ENST00000477002 ARRDC4Q8NCT1 418 aa21.33■■□□□ 1.01
CNTNAP3-209ENST00000477002 CHMP4CQ96CF2 233 aa21.33■■□□□ 1.01
CNTNAP3-209ENST00000477002 LAMA4Q16363 1823 aa21.32■■□□□ 1
CNTNAP3-209ENST00000477002 DNAJC25-GNG10A0A024R161 153 aa21.32■■□□□ 1
CNTNAP3-209ENST00000477002 DNM1LO00429 736 aa21.32■■□□□ 1
CNTNAP3-209ENST00000477002 NT5C2P49902 561 aa21.32■■□□□ 1
CNTNAP3-209ENST00000477002 TTC22Q5TAA0 569 aa21.32■■□□□ 1
CNTNAP3-209ENST00000477002 TBC1D10CQ8IV04 446 aa21.32■■□□□ 1
CNTNAP3-209ENST00000477002 DCAF4Q8WV16 495 aa21.32■■□□□ 1
CNTNAP3-209ENST00000477002 ANKRD35Q8N283 1001 aa21.31■■□□□ 1
CNTNAP3-209ENST00000477002 ESR2Q92731 530 aa21.31■■□□□ 1
CNTNAP3-209ENST00000477002 TTC14Q96N46 770 aa21.31■■□□□ 1
CNTNAP3-209ENST00000477002 TMEM47Q9BQJ4 181 aa21.31■■□□□ 1
CNTNAP3-209ENST00000477002 DSCC1Q9BVC3 393 aa21.31■■□□□ 1
CNTNAP3-209ENST00000477002 MTMR7Q9Y216 660 aa21.31■■□□□ 1
CNTNAP3-209ENST00000477002 SMCHD1A6NHR9 2005 aa21.3■■□□□ 1
CNTNAP3-209ENST00000477002 CCDC96Q2M329 555 aa21.3■■□□□ 1
CNTNAP3-209ENST00000477002 ZNF467Q7Z7K2 595 aaPredicted RBP21.3■■□□□ 1
CNTNAP3-209ENST00000477002 SENP6Q9GZR1 1112 aaPredicted RBP21.3■■□□□ 1
CNTNAP3-209ENST00000477002 RBM27Q9P2N5 1060 aaKnown RBP21.3■■□□□ 1
CNTNAP3-209ENST00000477002 CTNNA3Q9UI47 895 aa21.3■■□□□ 1
CNTNAP3-209ENST00000477002 PRR12Q9ULL5 1215 aa21.3■■□□□ 1
CNTNAP3-209ENST00000477002 CNPY2Q9Y2B0 182 aa21.3■■□□□ 1
CNTNAP3-209ENST00000477002 ZNF536O15090 1300 aa21.29■■□□□ 1
CNTNAP3-209ENST00000477002 SYNGAP1Q96PV0 1343 aa21.29■■□□□ 1
CNTNAP3-209ENST00000477002 GSPT1P15170 499 aaKnown RBP21.29■■□□□ 1
CNTNAP3-209ENST00000477002 TKFCQ3LXA3 575 aa21.29■■□□□ 1
CNTNAP3-209ENST00000477002 GJC2Q5T442 439 aaPredicted RBP21.29■■□□□ 1
CNTNAP3-209ENST00000477002 ANO1Q5XXA6 986 aa21.29■■□□□ 1
CNTNAP3-209ENST00000477002 MAMDC4Q6UXC1 1216 aa21.29■■□□□ 1
CNTNAP3-209ENST00000477002 AGBL1Q96MI9 1066 aa21.29■■□□□ 1
CNTNAP3-209ENST00000477002 PRO3102Q9H379 93 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms