RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 TRMT2BQ96GJ1 504 aaKnown RBP6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 ZFYVE28Q9HCC9 887 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 GPR108Q9NPR9 543 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 NDFIP2Q9NV92 336 aa6.73□□□□□ -1.33
SPTLC3-205ENST00000476791 ARPC4-TTLL3A0A0A6YYG9 625 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 TMEM127O75204 238 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 REC8O95072 547 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 RFC5P40937 340 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 SARSP49591 514 aaKnown RBP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 PEX5P50542 639 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 MNAT1P51948 309 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 RRP1P56182 461 aaKnown RBP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 ZBTB17Q13105 803 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 LAMB3Q13751 1172 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 BTG3Q14201 252 aaPredicted RBP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 BBS9Q3SYG4 887 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 ALFQ53S48 1182 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 ZNF804AQ7Z570 1209 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 CKAP2LQ8IYA6 745 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 EPSTI1Q96J88 318 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 ZMAT2Q96NC0 199 aaKnown RBP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 SELENOOQ9BVL4 669 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 AAASQ9NRG9 546 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 SIRT5Q9NXA8 310 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 LUC7L2Q9Y383 392 aaKnown RBP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 NMT2O60551 498 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 KPNA6O60684 536 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 ALDH1L1O75891 902 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 RTN3O95197 1032 aaPredicted RBP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 TCF7P36402 384 aaPredicted RBP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 STAT3P40763 770 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 C6orf118Q5T5N4 469 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 NUGGCQ68CJ6 796 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 HIBCHQ6NVY1 386 aaPredicted RBP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 SEPT14Q6ZU15 432 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 GRAMD2AQ8IUY3 354 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 SLC44A2Q8IWA5 706 aaPredicted RBP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 ARL8AQ96BM9 186 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 KRT82Q9NSB4 513 aa6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.72□□□□□ -1.33
SPTLC3-205ENST00000476791 KIF3BO15066 747 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 RTN2O75298 545 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 ERLIN1O75477 346 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 VIMP08670 466 aaKnown RBP6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 ATF3P18847 181 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 LMOD1P29536 600 aaPredicted RBP6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 TTF1Q15361 905 aaPredicted RBP6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 NR6A1Q15406 480 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 SH2D4BQ5SQS7 431 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 MMS22LQ6ZRQ5 1243 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 FAM47EQ6ZV65 393 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 IQCA1Q86XH1 822 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 DZIP1LQ8IYY4 767 aaKnown RBP6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 TRIML2Q8N7C3 387 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 NKAIN3Q8N8D7 197 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 SMYD1Q8NB12 490 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 HPS1Q92902 700 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 MAELQ96JY0 434 aaKnown RBP6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 NACAP1Q9BZK3 213 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 PPP1R12CQ9BZL4 782 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 SLKQ9H2G2 1235 aaPredicted RBP6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 DBNDD1Q9H9R9 158 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 KIF9Q9HAQ2 790 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 GRPEL1Q9HAV7 217 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 HERC5Q9UII4 1024 aaKnown RBP6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 SPG7Q9UQ90 795 aa6.71□□□□□ -1.33
SPTLC3-205ENST00000476791 SCAMP3O14828 347 aaKnown RBP6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 NCAM2O15394 837 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 MBD4O95243 580 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 ALOX15P16050 662 aaPredicted RBP6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 CD9P21926 228 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 VARSP26640 1264 aaKnown RBP6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 CD83Q01151 205 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 IMMTQ16891 758 aaKnown RBP6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 CPXCR1Q8N123 301 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 FAM81AQ8TBF8 368 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 TIFAQ96CG3 184 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 SPATA17Q96L03 361 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 NLRP3Q96P20 1036 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 TACO1Q9BSH4 297 aaKnown RBP6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 VCX3BQ9H321 246 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 TMX2Q9Y320 296 aa6.71□□□□□ -1.34
SPTLC3-205ENST00000476791 GOLGA6L10A0A0M3HER8 536 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 M0R2C6 588 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 ENPP3O14638 875 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 LARGE1O95461 756 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 AVPP01185 164 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 WEE1P30291 646 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 S100A5P33763 92 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 NOS2P35228 1153 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 PPM1FP49593 454 aaPredicted RBP6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 GBE1Q04446 702 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 DDX10Q13206 875 aaKnown RBP6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 LAMC2Q13753 1193 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 DGLUCYQ7Z3D6 616 aa6.7□□□□□ -1.34
SPTLC3-205ENST00000476791 ERC1Q8IUD2 1116 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms