RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 PPP4R3BQ5MIZ7 849 aa17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 MRFAP1L1Q96HT8 127 aa17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 ZNF646O15015 1829 aaPredicted RBP17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 SMCO2A6NFE2 343 aa17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 SNHG28P0DPA3 235 aa17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 SMARCE1Q969G3 411 aa17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 GPCPD1Q9NPB8 672 aa17.5■□□□□ 0.39
RPUSD3-215ENST00000475470 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 SLURP2P0DP57 97 aa17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 INF2Q27J81 1249 aa17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 ARL6IP4Q66PJ3 421 aaKnown RBP17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 TDRD3Q9H7E2 651 aaKnown RBP17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 DNAJC18Q9H819 358 aa17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 A0A087X0B3 334 aa17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 PRR29P0C7W0 189 aa17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 CFAP100Q494V2 611 aa17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 CCDC186Q7Z3E2 898 aa17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 GRAMD1CQ8IYS0 662 aa17.49■□□□□ 0.39
RPUSD3-215ENST00000475470 IKBKBO14920 756 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 SLFN14P0C7P3 912 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 PTGS1P23219 599 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 CERKLQ49MI3 558 aaPredicted RBP17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 MAN1B1Q9UKM7 699 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 FAM196BA6NMK8 535 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 DPEP1P16444 411 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 ZNF543Q08ER8 600 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 NT5DC1Q5TFE4 455 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 SH3BP5LQ7L8J4 393 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 KRT25Q7Z3Z0 450 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 C4orf32Q8N8J7 132 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 NRBP1Q9UHY1 535 aa17.48■□□□□ 0.39
RPUSD3-215ENST00000475470 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 SARSP49591 514 aaKnown RBP17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 NCAPHQ15003 741 aa17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 IL17AQ16552 155 aa17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 PSMD1Q99460 953 aa17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 SMC2O95347 1197 aa17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 LONP1P36776 959 aaKnown RBP17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 CCDC96Q2M329 555 aa17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 GPATCH4Q5T3I0 446 aaKnown RBP17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 LARGE2Q8N3Y3 721 aa17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 PRMT6Q96LA8 375 aaPredicted RBP17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 KCNF1Q9H3M0 494 aa17.47■□□□□ 0.39
RPUSD3-215ENST00000475470 AFMP43652 599 aa17.46■□□□□ 0.39
RPUSD3-215ENST00000475470 MYL5Q02045 173 aa17.46■□□□□ 0.39
RPUSD3-215ENST00000475470 NONOQ15233 471 aaKnown RBP eCLIP17.46■□□□□ 0.39
RPUSD3-215ENST00000475470 TRIML1Q8N9V2 468 aa17.46■□□□□ 0.39
RPUSD3-215ENST00000475470 PAGE5Q96GU1 130 aa17.46■□□□□ 0.39
RPUSD3-215ENST00000475470 PYM1Q9BRP8 204 aaKnown RBP17.46■□□□□ 0.39
RPUSD3-215ENST00000475470 ESYT2A0FGR8 921 aa17.46■□□□□ 0.38
RPUSD3-215ENST00000475470 ENTPD3O75355 529 aa17.46■□□□□ 0.38
RPUSD3-215ENST00000475470 BMP6P22004 513 aa17.46■□□□□ 0.38
RPUSD3-215ENST00000475470 DTHD1Q6ZMT9 781 aa17.46■□□□□ 0.38
RPUSD3-215ENST00000475470 IQUBQ8NA54 791 aa17.46■□□□□ 0.38
RPUSD3-215ENST00000475470 KANSL2Q9H9L4 492 aa17.46■□□□□ 0.38
RPUSD3-215ENST00000475470 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.38
RPUSD3-215ENST00000475470 DACH1Q9UI36 760 aa17.46■□□□□ 0.38
RPUSD3-215ENST00000475470 GREB1LQ9C091 1923 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 MYH4Q9Y623 1939 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 SIPA1L1O43166 1804 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 RAD17O75943 681 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 KCNA3P22001 575 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 TXLNAP40222 546 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 MORC3Q14149 939 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 TATDN1Q6P1N9 297 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 ADGRF4Q8IZF3 695 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 REXO1Q8N1G1 1221 aaKnown RBP17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 MLKLQ8NB16 471 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 COA7Q96BR5 231 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 LAD1O00515 517 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 RAD21O60216 631 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 OFD1O75665 1012 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 EEF2P13639 858 aaKnown RBP17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 LMOD1P29536 600 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 TTBK2Q6IQ55 1244 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 SH3RF1Q7Z6J0 888 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 SPATA20Q8TB22 786 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 JMJD4Q9H9V9 463 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 TMOD2Q9NZR1 351 aa17.45■□□□□ 0.38
RPUSD3-215ENST00000475470 PNMA6FA0A0J9YX94 578 aa17.44■□□□□ 0.38
RPUSD3-215ENST00000475470 LETM2Q2VYF4 491 aa17.44■□□□□ 0.38
RPUSD3-215ENST00000475470 KCTD1Q719H9 257 aa17.44■□□□□ 0.38
RPUSD3-215ENST00000475470 NYAP2Q9P242 653 aa17.44■□□□□ 0.38
RPUSD3-215ENST00000475470 BIN2Q9UBW5 565 aaPredicted RBP17.44■□□□□ 0.38
RPUSD3-215ENST00000475470 PSMD14O00487 310 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 SLC16A2P36021 539 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 ADCY7P51828 1080 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 JAKMIP3Q5VZ66 844 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 TMEM60Q9H2L4 133 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 IFNKQ9P0W0 207 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 HDAC9Q9UKV0 1011 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 CCNT1O60563 726 aaKnown RBP17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 VIL1P09327 827 aaKnown RBP17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 ABCB5Q2M3G0 1257 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 SHROOM1Q2M3G4 852 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms