RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SLC6A17Q9H1V8 727 aa7.74□□□□□ -1.17
LTN1-204ENST00000475344 CWC22Q9HCG8 908 aaKnown RBP7.74□□□□□ -1.17
LTN1-204ENST00000475344 PMS1P54277 932 aaKnown RBP7.73□□□□□ -1.17
LTN1-204ENST00000475344 JAG1P78504 1218 aa7.73□□□□□ -1.17
LTN1-204ENST00000475344 NR0B2Q15466 257 aa7.73□□□□□ -1.17
LTN1-204ENST00000475344 NOL9Q5SY16 702 aaKnown RBP7.73□□□□□ -1.17
LTN1-204ENST00000475344 ZNF605Q86T29 641 aa7.73□□□□□ -1.17
LTN1-204ENST00000475344 DBX1A6NMT0 343 aa7.72□□□□□ -1.17
LTN1-204ENST00000475344 NFIBO00712 420 aa7.72□□□□□ -1.17
LTN1-204ENST00000475344 CTSKP43235 329 aa7.72□□□□□ -1.17
LTN1-204ENST00000475344 EIF6P56537 245 aaKnown RBP7.72□□□□□ -1.17
LTN1-204ENST00000475344 TAB3Q8N5C8 712 aaPredicted RBP7.72□□□□□ -1.17
LTN1-204ENST00000475344 BRF1Q92994 677 aa7.72□□□□□ -1.17
LTN1-204ENST00000475344 INTS4Q96HW7 963 aaKnown RBP7.72□□□□□ -1.17
LTN1-204ENST00000475344 ZNF281Q9Y2X9 895 aa7.72□□□□□ -1.17
LTN1-204ENST00000475344 TMEM253P0C7T8 217 aa7.71□□□□□ -1.18
LTN1-204ENST00000475344 COL9A2Q14055 689 aaPredicted RBP7.71□□□□□ -1.18
LTN1-204ENST00000475344 AXDND1Q5T1B0 1012 aaPredicted RBP7.71□□□□□ -1.18
LTN1-204ENST00000475344 CWF19L1Q69YN2 538 aaKnown RBP7.71□□□□□ -1.18
LTN1-204ENST00000475344 RBBP8NLQ8NC74 664 aaPredicted RBP7.71□□□□□ -1.18
LTN1-204ENST00000475344 CPLX3Q8WVH0 158 aa7.71□□□□□ -1.18
LTN1-204ENST00000475344 HHIPL1Q96JK4 782 aa7.71□□□□□ -1.18
LTN1-204ENST00000475344 SPATA32Q96LK8 384 aa7.71□□□□□ -1.18
LTN1-204ENST00000475344 YBX2Q9Y2T7 364 aaKnown RBP7.71□□□□□ -1.18
LTN1-204ENST00000475344 SHOXO15266 292 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 C1QTNF9P0C862 333 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 BMP8BP34820 402 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 KIR2DL1P43626 348 aaPredicted RBP7.7□□□□□ -1.18
LTN1-204ENST00000475344 KIR2DL2P43627 348 aaPredicted RBP7.7□□□□□ -1.18
LTN1-204ENST00000475344 NASPP49321 788 aaPredicted RBP7.7□□□□□ -1.18
LTN1-204ENST00000475344 RTP1P59025 263 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 PPP2R5EQ16537 467 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 ADGRF1Q5T601 910 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 TMEM132EQ6IEE7 984 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 SMARCC1Q92922 1105 aaPredicted RBP7.7□□□□□ -1.18
LTN1-204ENST00000475344 KCNN1Q92952 543 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 FCRL2Q96LA5 508 aaPredicted RBP7.7□□□□□ -1.18
LTN1-204ENST00000475344 SRRTQ9BXP5 876 aaKnown RBP7.7□□□□□ -1.18
LTN1-204ENST00000475344 ACBD3Q9H3P7 528 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 AP5S1Q9NUS5 200 aa7.7□□□□□ -1.18
LTN1-204ENST00000475344 GPR55Q9Y2T6 319 aaPredicted RBP7.7□□□□□ -1.18
LTN1-204ENST00000475344 NRDCO43847 1150 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 TSPAN15O95858 294 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 EFEMP2O95967 443 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 GSNP06396 782 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 VAV1P15498 845 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 SOX9P48436 509 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 SNX17Q15036 470 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 ANKLE2Q86XL3 938 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 IRF2BP1Q8IU81 584 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 NAT16Q8N8M0 369 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 BHLHE22Q8NFJ8 381 aaPredicted RBP7.69□□□□□ -1.18
LTN1-204ENST00000475344 CCSER2Q9H7U1 834 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 GP6Q9HCN6 339 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 PCDHB10Q9UN67 800 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 INPP5FQ9Y2H2 1132 aa7.69□□□□□ -1.18
LTN1-204ENST00000475344 CCDC9Q9Y3X0 531 aaKnown RBP7.69□□□□□ -1.18
LTN1-204ENST00000475344 NOTOA8MTQ0 251 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 H0Y8X5 98 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 ZNF205O95201 554 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 GSTM1P09488 218 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 CD247P20963 164 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 GNPTABQ3T906 1256 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 ATG14Q6ZNE5 492 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 RASGRP4Q8TDF6 673 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 SHISA4Q96DD7 197 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 SLC26A8Q96RN1 970 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 NOL6Q9H6R4 1146 aaKnown RBP7.68□□□□□ -1.18
LTN1-204ENST00000475344 ERVK13-1Q9NX77 482 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 PRR13Q9NZ81 148 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 ZNF214Q9UL59 606 aaPredicted RBP7.68□□□□□ -1.18
LTN1-204ENST00000475344 ZNF451Q9Y4E5 1061 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 LTBP3Q9NS15 1303 aa7.68□□□□□ -1.18
LTN1-204ENST00000475344 TCAF2A6NFQ2 919 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 ETV2O00321 342 aaPredicted RBP7.67□□□□□ -1.18
LTN1-204ENST00000475344 ITGA4P13612 1032 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 ENDOUP21128 410 aaKnown RBP7.67□□□□□ -1.18
LTN1-204ENST00000475344 SDHBP21912 280 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 ZNF445P59923 1031 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 PPP2R5DQ14738 602 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 KIR3DS1Q14943 382 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 NLRX1Q86UT6 975 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 FIBCD1Q8N539 461 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 ADCY4Q8NFM4 1077 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 PLCD4Q9BRC7 762 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 TGIF2Q9GZN2 237 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 TNFRSF10DQ9UBN6 386 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 TAF6LQ9Y6J9 622 aa7.67□□□□□ -1.18
LTN1-204ENST00000475344 OR14I1A6ND48 311 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 FADS2P1A8MWK0 482 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 NPIPB6E9PJ23 425 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 KRT1P04264 644 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 GJA8P48165 433 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 GIPRP48546 466 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 ZDHHC15Q96MV8 337 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 TOX2Q96NM4 488 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 KRTAP9-9Q9BYP9 154 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 KRTAP9-4Q9BYQ2 154 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 MCOLN1Q9GZU1 580 aa7.66□□□□□ -1.18
LTN1-204ENST00000475344 SLC12A7Q9Y666 1083 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms