RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 F5H6K3 240 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 ERCC3P19447 782 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 TFAP4Q01664 338 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 KLRC3Q07444 240 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 FAM47AQ5JRC9 791 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 VPS53Q5VIR6 699 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 DPP9Q86TI2 863 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 NCAPG2Q86XI2 1143 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 CEP95Q96GE4 821 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 NUP88Q99567 741 aaPredicted RBP11.2□□□□□ -0.62
PDPN-204ENST00000475043 FBXO28Q9NVF7 368 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 PDE4DIPQ5VU43 2346 aa11.2□□□□□ -0.62
PDPN-204ENST00000475043 TSPY2A6NKD2 308 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 FOXP2O15409 715 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 STRNO43815 780 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 TTLL1O95922 423 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 CACNB2Q08289 660 aaPredicted RBP11.19□□□□□ -0.62
PDPN-204ENST00000475043 NMIQ13287 307 aaPredicted RBP11.19□□□□□ -0.62
PDPN-204ENST00000475043 GRB14Q14449 540 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 TMEM132BQ14DG7 1078 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 LRRC47Q8N1G4 583 aaKnown RBP11.19□□□□□ -0.62
PDPN-204ENST00000475043 SHCBP1Q8NEM2 672 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 HTATIP2Q9BUP3 242 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 CRISPLD2Q9H0B8 497 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 MROH8Q9H579 483 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 MTMR4Q9NYA4 1195 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
PDPN-204ENST00000475043 ZNF236Q9UL36 1845 aa11.19□□□□□ -0.62
PDPN-204ENST00000475043 ZNFX1Q9P2E3 1918 aaKnown RBP11.18□□□□□ -0.62
PDPN-204ENST00000475043 IGKV6D-41A0A0C4DH26 115 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 VWA5AO00534 786 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 NDUFB10O96000 172 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 CAPN2P17655 700 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 SDSP20132 328 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 ADORA2AP29274 412 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 CCND3P30281 292 aaPredicted RBP11.18□□□□□ -0.62
PDPN-204ENST00000475043 SLC4A3P48751 1232 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 MAP3K21Q5TCX8 1036 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 MFSD14CQ5VZR4 134 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 UBE2Q1Q7Z7E8 422 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 NPLOC4Q8TAT6 608 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 PAWRQ96IZ0 340 aaKnown RBP11.18□□□□□ -0.62
PDPN-204ENST00000475043 SLF1Q9BQI6 1058 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 OSBPL3Q9H4L5 887 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 INCENPQ9NQS7 918 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 FLRT1Q9NZU1 646 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 PPP1R9AQ9ULJ8 1098 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 STX8Q9UNK0 236 aa11.18□□□□□ -0.62
PDPN-204ENST00000475043 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
PDPN-204ENST00000475043 PLIN4Q96Q06 1357 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 CCDC171Q6TFL3 1326 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 FRMPD3Q5JV73 1810 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 RANBP6O60518 1105 aaKnown RBP11.17□□□□□ -0.62
PDPN-204ENST00000475043 SLC25A27O95847 323 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 FGAP02671 866 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 HOXC6P09630 235 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 HSPD1P10809 573 aaKnown RBP11.17□□□□□ -0.62
PDPN-204ENST00000475043 FCER1AP12319 257 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 CNGA1P29973 690 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 STAT3P40763 770 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 MFAP1P55081 439 aaKnown RBP11.17□□□□□ -0.62
PDPN-204ENST00000475043 RRP12Q5JTH9 1297 aaKnown RBP11.17□□□□□ -0.62
PDPN-204ENST00000475043 NECAB2Q7Z6G3 386 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 ZNF589Q86UQ0 364 aaPredicted RBP11.17□□□□□ -0.62
PDPN-204ENST00000475043 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 PRPF38AQ8NAV1 312 aaKnown RBP11.17□□□□□ -0.62
PDPN-204ENST00000475043 DIS3LQ8TF46 1054 aaKnown RBP11.17□□□□□ -0.62
PDPN-204ENST00000475043 MKL1Q969V6 931 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 KIFC2Q96AC6 838 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 DIAPH3Q9NSV4 1193 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 SLC5A4Q9NY91 659 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 ADAMTS5Q9UNA0 930 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
PDPN-204ENST00000475043 H0YGN5 161 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 COBLO75128 1261 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 BMP3P12645 472 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 CYP2C19P33261 490 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 HAND2P61296 217 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 IKQ13123 557 aaPredicted RBP11.16□□□□□ -0.62
PDPN-204ENST00000475043 ALX1Q15699 326 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 SLFN13Q68D06 897 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 CWC27Q6UX04 472 aaKnown RBP11.16□□□□□ -0.62
PDPN-204ENST00000475043 RIOX2Q8IUF8 465 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 CPXCR1Q8N123 301 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 ANKLE1Q8NAG6 615 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 GMCL1P1Q8NEA9 526 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 MMP19Q99542 508 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 ANAPC4Q9UJX5 808 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 ZNF214Q9UL59 606 aaPredicted RBP11.16□□□□□ -0.62
PDPN-204ENST00000475043 SYNPO2Q9UMS6 1093 aa11.16□□□□□ -0.62
PDPN-204ENST00000475043 MTMR7Q9Y216 660 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms