RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 RARBP10826 455 aa17.91■□□□□ 0.46
VARS-223ENST00000474643 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
VARS-223ENST00000474643 GJC2Q5T442 439 aaPredicted RBP17.91■□□□□ 0.46
VARS-223ENST00000474643 CCDC129Q6ZRS4 1044 aa17.91■□□□□ 0.46
VARS-223ENST00000474643 UBE2OQ9C0C9 1292 aaKnown RBP17.91■□□□□ 0.46
VARS-223ENST00000474643 MTMR4Q9NYA4 1195 aa17.91■□□□□ 0.46
VARS-223ENST00000474643 STX8Q9UNK0 236 aa17.91■□□□□ 0.46
VARS-223ENST00000474643 COL6A1P12109 1028 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 LRRC26Q2I0M4 334 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 PRAMEF19Q5SWL8 479 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 SLFN13Q68D06 897 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 TRPV1Q8NER1 839 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 CHMP4CQ96CF2 233 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 HELLSQ9NRZ9 838 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 DIAPH3Q9NSV4 1193 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 ZNF214Q9UL59 606 aaPredicted RBP17.9■□□□□ 0.46
VARS-223ENST00000474643 SYNPO2Q9UMS6 1093 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 ADAMTS5Q9UNA0 930 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 RLFQ13129 1914 aa17.9■□□□□ 0.46
VARS-223ENST00000474643 COL11A1P12107 1806 aaPredicted RBP17.89■□□□□ 0.45
VARS-223ENST00000474643 RANBP6O60518 1105 aaKnown RBP17.89■□□□□ 0.45
VARS-223ENST00000474643 BMP3P12645 472 aa17.89■□□□□ 0.45
VARS-223ENST00000474643 MAGEA10P43363 369 aaPredicted RBP17.89■□□□□ 0.45
VARS-223ENST00000474643 ANKRD35Q8N283 1001 aa17.89■□□□□ 0.45
VARS-223ENST00000474643 NEDD1Q8NHV4 660 aa17.89■□□□□ 0.45
VARS-223ENST00000474643 TINF2Q9BSI4 451 aa17.89■□□□□ 0.45
VARS-223ENST00000474643 MTMR7Q9Y216 660 aa17.89■□□□□ 0.45
VARS-223ENST00000474643 ATP11BQ9Y2G3 1177 aa17.89■□□□□ 0.45
VARS-223ENST00000474643 ALPK3Q96L96 1907 aa17.89■□□□□ 0.45
VARS-223ENST00000474643 FRMPD3Q5JV73 1810 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 MYH4Q9Y623 1939 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 HIP1O00291 1037 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 SDSP20132 328 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 SLC1A4P43007 532 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 STAT2P52630 851 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 CTDSPL2Q05D32 466 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 NMIQ13287 307 aaPredicted RBP17.88■□□□□ 0.45
VARS-223ENST00000474643 MCMDC2Q4G0Z9 681 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 RRP12Q5JTH9 1297 aaKnown RBP17.88■□□□□ 0.45
VARS-223ENST00000474643 TTC22Q5TAA0 569 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 RNF180Q86T96 592 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 TICAM2Q86XR7 235 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 GMCL1P1Q8NEA9 526 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 FAM227BQ96M60 508 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 RAVER2Q9HCJ3 691 aaKnown RBP17.88■□□□□ 0.45
VARS-223ENST00000474643 XPNPEP3Q9NQH7 507 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 PRDM5Q9NQX1 630 aaPredicted RBP17.88■□□□□ 0.45
VARS-223ENST00000474643 HOMER2Q9NSB8 354 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 FBXO40Q9UH90 709 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 NRBP1Q9UHY1 535 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 PARP14Q460N5 1801 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 PLIN4Q96Q06 1357 aa17.88■□□□□ 0.45
VARS-223ENST00000474643 GREB1LQ9C091 1923 aaPredicted RBP17.88■□□□□ 0.45
VARS-223ENST00000474643 IGKV6D-41A0A0C4DH26 115 aa17.87■□□□□ 0.45
VARS-223ENST00000474643 TMEM232C9JQI7 657 aa17.87■□□□□ 0.45
VARS-223ENST00000474643 MDM2Q00987 491 aaPredicted RBP17.87■□□□□ 0.45
VARS-223ENST00000474643 CHURC1Q8WUH1 139 aa17.87■□□□□ 0.45
VARS-223ENST00000474643 MKL1Q969V6 931 aa17.87■□□□□ 0.45
VARS-223ENST00000474643 PRO3102Q9H379 93 aa17.87■□□□□ 0.45
VARS-223ENST00000474643 DIS3Q9Y2L1 958 aaKnown RBP17.87■□□□□ 0.45
VARS-223ENST00000474643 A0A0D9SFI3 127 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 FDX1P10109 184 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 BMP8BP34820 402 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 MFAP1P55081 439 aaKnown RBP17.86■□□□□ 0.45
VARS-223ENST00000474643 RTP1P59025 263 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 CCDC96Q2M329 555 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 ZNF792Q3KQV3 632 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 FAM160B2Q86V87 743 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 TDHQ8IZJ6 230 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 REPS2Q8NFH8 660 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 FERMT2Q96AC1 680 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 GDF15Q99988 308 aa17.86■□□□□ 0.45
VARS-223ENST00000474643 ZHX1Q9UKY1 873 aaPredicted RBP17.86■□□□□ 0.45
VARS-223ENST00000474643 AKR1A1P14550 325 aa17.85■□□□□ 0.45
VARS-223ENST00000474643 ADCYAP1R1P41586 468 aa17.85■□□□□ 0.45
VARS-223ENST00000474643 CWC27Q6UX04 472 aaKnown RBP17.85■□□□□ 0.45
VARS-223ENST00000474643 CHST13Q8NET6 341 aa17.85■□□□□ 0.45
VARS-223ENST00000474643 SLC38A10Q9HBR0 1119 aa17.85■□□□□ 0.45
VARS-223ENST00000474643 ATP2A1O14983 1001 aa17.84■□□□□ 0.45
VARS-223ENST00000474643 GSPT1P15170 499 aaKnown RBP17.84■□□□□ 0.45
VARS-223ENST00000474643 MCCP23508 829 aa17.84■□□□□ 0.45
VARS-223ENST00000474643 OAZ1P54368 228 aa17.84■□□□□ 0.45
VARS-223ENST00000474643 LRRC41Q15345 812 aa17.84■□□□□ 0.45
VARS-223ENST00000474643 VPS53Q5VIR6 699 aa17.84■□□□□ 0.45
VARS-223ENST00000474643 MSL3Q8N5Y2 521 aaKnown RBP17.84■□□□□ 0.45
VARS-223ENST00000474643 SZT2Q5T011 3432 aa17.83■□□□□ 0.45
VARS-223ENST00000474643 CCDC171Q6TFL3 1326 aa17.83■□□□□ 0.44
VARS-223ENST00000474643 SLC39A5Q6ZMH5 540 aa17.83■□□□□ 0.44
VARS-223ENST00000474643 KCTD1Q719H9 257 aa17.83■□□□□ 0.44
VARS-223ENST00000474643 GMCL1Q96IK5 515 aa17.83■□□□□ 0.44
VARS-223ENST00000474643 ACAD9Q9H845 621 aa17.83■□□□□ 0.44
VARS-223ENST00000474643 SPC25Q9HBM1 224 aa17.83■□□□□ 0.44
VARS-223ENST00000474643 FAM184BQ9ULE4 1060 aa17.83■□□□□ 0.44
VARS-223ENST00000474643 RIPK3Q9Y572 518 aa17.83■□□□□ 0.44
VARS-223ENST00000474643 PLXNA1Q9UIW2 1896 aa17.82■□□□□ 0.44
VARS-223ENST00000474643 SYNGAP1Q96PV0 1343 aa17.82■□□□□ 0.44
VARS-223ENST00000474643 PGK1P00558 417 aa17.82■□□□□ 0.44
VARS-223ENST00000474643 IGHA2P01877 340 aa17.82■□□□□ 0.44
VARS-223ENST00000474643 CCDC174Q6PII3 467 aa17.82■□□□□ 0.44
VARS-223ENST00000474643 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms