RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 LGALS16A8MUM7 142 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 HSF2BPO75031 334 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 PARP1P09874 1014 aaKnown RBP20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 CSB-PGBD3P0DP91 1061 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 NAP1L1P55209 391 aaKnown RBP20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 CTDSPL2Q05D32 466 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 CCDC57Q2TAC2 916 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 NAA35Q5VZE5 725 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 EMBQ6PCB8 327 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 MTRQ99707 1265 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 SNX12Q9UMY4 172 aa20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 TRPM3Q9HCF6 1732 aaPredicted RBP20.81■□□□□ 0.92
ECHDC1-214ENST00000474289 A0A1W2PQC6 194 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 PES1O00541 588 aaKnown RBP20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 CHUKO15111 745 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 CYLC1P35663 651 aaPredicted RBP20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 YTHDF3Q7Z739 585 aaKnown RBP20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 ANKLE2Q86XL3 938 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 SPATA4Q8NEY3 305 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 GIMAP7Q8NHV1 300 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 ZKSCAN3Q9BRR0 538 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 CHD4Q14839 1912 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 KRT14P02533 472 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 LSP1P33241 339 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 ZNF572Q7Z3I7 529 aaPredicted RBP20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 ZNF507Q8TCN5 953 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 ZIM3Q96PE6 472 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 PAGR1Q9BTK6 254 aa20.8■□□□□ 0.92
ECHDC1-214ENST00000474289 IDH1O75874 414 aaKnown RBP20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 CYP27A1Q02318 531 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 ITIH3Q06033 890 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 NNTQ13423 1086 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 NEDD9Q14511 834 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 NHEJ1Q9H9Q4 299 aaPredicted RBP20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 AGPAT5Q9NUQ2 364 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 GDAQ9Y2T3 454 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 ZNF532Q9HCE3 1301 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 MYH6P13533 1939 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 TRIM49BA6NDI0 452 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 IPO7O95373 1038 aaKnown RBP20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 MATR3P43243 847 aaKnown RBP eCLIP20.79■□□□□ 0.928e-7■■■■■ 31.9
ECHDC1-214ENST00000474289 ZNF658Q5TYW1 1059 aaPredicted RBP20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 RNPC3Q96LT9 517 aaKnown RBP20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 EPN3Q9H201 632 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 PIH1D3Q9NQM4 214 aaKnown RBP20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.923e-7■■□□□ 13.1
ECHDC1-214ENST00000474289 STIM2Q9P246 746 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 MCM8Q9UJA3 840 aa20.79■□□□□ 0.92
ECHDC1-214ENST00000474289 RDXP35241 583 aaKnown RBP20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 PRCPP42785 496 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 GUCY1A3Q02108 690 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 UBE3CQ15386 1083 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 PDXDC2PQ6P474 469 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 MICALCLQ6ZW33 695 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 SMCR8Q8TEV9 937 aaPredicted RBP20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 CAVIN3Q969G5 261 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 VCPKMTQ9H867 229 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 EPB41L4AQ9HCS5 686 aaPredicted RBP20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 KLC4Q9NSK0 619 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 MYH10P35580 1976 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 HAUS3Q68CZ6 603 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 KDM7AQ6ZMT4 941 aa20.78■□□□□ 0.92
ECHDC1-214ENST00000474289 PDS5AQ29RF7 1337 aaKnown RBP20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 H7C1D1 291 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 KIF5AQ12840 1032 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 PREPLQ4J6C6 727 aaPredicted RBP20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 FKBP15Q5T1M5 1219 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 ZNF473Q8WTR7 871 aaKnown RBP20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 STRBPQ96SI9 672 aaKnown RBP20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 TTYH3Q9C0H2 523 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 CAPN6Q9Y6Q1 641 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 NUP188Q5SRE5 1749 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 GTPBP6O43824 516 aaPredicted RBP20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 ELF1P32519 619 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 SMTNP53814 917 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 WTAPQ15007 396 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 ZNF174Q15697 407 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 CCDC170Q8IYT3 715 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 FAM212AQ96EL1 285 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 SMARCAL1Q9NZC9 954 aa20.77■□□□□ 0.92
ECHDC1-214ENST00000474289 RASSF9O75901 435 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 PDE6AP16499 860 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 SCP2P22307 547 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 TDO2P48775 406 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 ACTN3Q08043 901 aaPredicted RBP20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 CHRNA2Q15822 529 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 RRP12Q5JTH9 1297 aaKnown RBP20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 RNF187Q5TA31 235 aaPredicted RBP20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 CCDC13Q8IYE1 715 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 TRIM58Q8NG06 486 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 NUP133Q8WUM0 1156 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 ZNF622Q969S3 477 aaKnown RBP eCLIP20.76■□□□□ 0.911e-7■□□□□ 9.8
ECHDC1-214ENST00000474289 VAV2P52735 878 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 PMS1P54277 932 aaKnown RBP20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 CCDC40Q4G0X9 1142 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 FANCBQ8NB91 859 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 NAPBQ9H115 298 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 LRWD1Q9UFC0 647 aa20.76■□□□□ 0.91
ECHDC1-214ENST00000474289 ZNF263O14978 683 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms