RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 TACC3Q9Y6A5 838 aa18.75■□□□□ 0.59
CDPF1-205ENST00000474256 A0A1W2PPC1 479 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 DNM1LO00429 736 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 ZBED4O75132 1171 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 BMP3P12645 472 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 NUCB1Q02818 461 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 LRRC26Q2I0M4 334 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 PPP4R3BQ5MIZ7 849 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 PRAMEF19Q5SWL8 479 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 PLEKHM2Q8IWE5 1019 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 KIFC2Q96AC6 838 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 GDF15Q99988 308 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 OSBPL3Q9H4L5 887 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 IL17RBQ9NRM6 502 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 ZMYND8Q9ULU4 1186 aaPredicted RBP18.74■□□□□ 0.59
CDPF1-205ENST00000474256 TRIOBPQ9H2D6 2365 aa18.74■□□□□ 0.59
CDPF1-205ENST00000474256 TSPY2A6NKD2 308 aa18.73■□□□□ 0.59
CDPF1-205ENST00000474256 ORC4O43929 436 aa18.73■□□□□ 0.59
CDPF1-205ENST00000474256 FGAP02671 866 aa18.73■□□□□ 0.59
CDPF1-205ENST00000474256 NMIQ13287 307 aaPredicted RBP18.73■□□□□ 0.59
CDPF1-205ENST00000474256 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.73■□□□□ 0.59
CDPF1-205ENST00000474256 GMCL1Q96IK5 515 aa18.73■□□□□ 0.59
CDPF1-205ENST00000474256 TINF2Q9BSI4 451 aa18.73■□□□□ 0.59
CDPF1-205ENST00000474256 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
CDPF1-205ENST00000474256 TRIM6-TRIM34B2RNG4 842 aa18.72■□□□□ 0.59
CDPF1-205ENST00000474256 HSPD1P10809 573 aaKnown RBP18.72■□□□□ 0.59
CDPF1-205ENST00000474256 BMP8BP34820 402 aa18.72■□□□□ 0.59
CDPF1-205ENST00000474256 NOVP48745 357 aa18.72■□□□□ 0.59
CDPF1-205ENST00000474256 OAZ1P54368 228 aa18.72■□□□□ 0.59
CDPF1-205ENST00000474256 ZNF589Q86UQ0 364 aaPredicted RBP18.72■□□□□ 0.59
CDPF1-205ENST00000474256 CPXCR1Q8N123 301 aa18.72■□□□□ 0.59
CDPF1-205ENST00000474256 ARRDC4Q8NCT1 418 aa18.72■□□□□ 0.59
CDPF1-205ENST00000474256 SENP6Q9GZR1 1112 aaPredicted RBP18.72■□□□□ 0.59
CDPF1-205ENST00000474256 RAVER2Q9HCJ3 691 aaKnown RBP18.72■□□□□ 0.59
CDPF1-205ENST00000474256 STX8Q9UNK0 236 aa18.72■□□□□ 0.59
CDPF1-205ENST00000474256 ZMYM6O95789 1325 aa18.72■□□□□ 0.59
CDPF1-205ENST00000474256 DNAJC25-GNG10A0A024R161 153 aa18.71■□□□□ 0.59
CDPF1-205ENST00000474256 TMEM232C9JQI7 657 aa18.71■□□□□ 0.59
CDPF1-205ENST00000474256 NMT2O60551 498 aa18.71■□□□□ 0.59
CDPF1-205ENST00000474256 FDX1P10109 184 aa18.71■□□□□ 0.59
CDPF1-205ENST00000474256 SYN1P17600 705 aa18.71■□□□□ 0.59
CDPF1-205ENST00000474256 SLC1A4P43007 532 aa18.71■□□□□ 0.59
CDPF1-205ENST00000474256 GJC2Q5T442 439 aaPredicted RBP18.71■□□□□ 0.59
CDPF1-205ENST00000474256 ANO1Q5XXA6 986 aa18.71■□□□□ 0.59
CDPF1-205ENST00000474256 RILPL2Q969X0 211 aa18.71■□□□□ 0.59
CDPF1-205ENST00000474256 CTDP1Q9Y5B0 961 aaPredicted RBP18.71■□□□□ 0.59
CDPF1-205ENST00000474256 COL11A1P12107 1806 aaPredicted RBP18.7■□□□□ 0.58
CDPF1-205ENST00000474256 RANBP6O60518 1105 aaKnown RBP18.7■□□□□ 0.58
CDPF1-205ENST00000474256 PLA2G6O60733 806 aa18.7■□□□□ 0.58
CDPF1-205ENST00000474256 SDSP20132 328 aa18.7■□□□□ 0.58
CDPF1-205ENST00000474256 MCCP23508 829 aa18.7■□□□□ 0.58
CDPF1-205ENST00000474256 STAT2P52630 851 aa18.7■□□□□ 0.58
CDPF1-205ENST00000474256 FAM160B2Q86V87 743 aa18.7■□□□□ 0.58
CDPF1-205ENST00000474256 MSL3Q8N5Y2 521 aaKnown RBP18.7■□□□□ 0.58
CDPF1-205ENST00000474256 CHST13Q8NET6 341 aa18.7■□□□□ 0.58
CDPF1-205ENST00000474256 CHURC1Q8WUH1 139 aa18.7■□□□□ 0.58
CDPF1-205ENST00000474256 STAG1Q8WVM7 1258 aa18.7■□□□□ 0.58
CDPF1-205ENST00000474256 CCDC171Q6TFL3 1326 aa18.7■□□□□ 0.58
CDPF1-205ENST00000474256 ZNF865P0CJ78 1059 aaPredicted RBP18.69■□□□□ 0.58
CDPF1-205ENST00000474256 TAL1P17542 331 aaPredicted RBP18.69■□□□□ 0.58
CDPF1-205ENST00000474256 MAMDC4Q6UXC1 1216 aa18.69■□□□□ 0.58
CDPF1-205ENST00000474256 DDX11Q96FC9 970 aa18.69■□□□□ 0.58
CDPF1-205ENST00000474256 FBXO40Q9UH90 709 aa18.69■□□□□ 0.58
CDPF1-205ENST00000474256 MAGEA10P43363 369 aaPredicted RBP18.68■□□□□ 0.58
CDPF1-205ENST00000474256 SLC4A3P48751 1232 aa18.68■□□□□ 0.58
CDPF1-205ENST00000474256 LRRC41Q15345 812 aa18.68■□□□□ 0.58
CDPF1-205ENST00000474256 RCSD1Q6JBY9 416 aa18.68■□□□□ 0.58
CDPF1-205ENST00000474256 ZNF467Q7Z7K2 595 aaPredicted RBP18.68■□□□□ 0.58
CDPF1-205ENST00000474256 TCP11L1Q9NUJ3 509 aa18.68■□□□□ 0.58
CDPF1-205ENST00000474256 CNPY2Q9Y2B0 182 aa18.68■□□□□ 0.58
CDPF1-205ENST00000474256 SUPT16HQ9Y5B9 1047 aaKnown RBP18.68■□□□□ 0.58
CDPF1-205ENST00000474256 ZNF536O15090 1300 aa18.68■□□□□ 0.58
CDPF1-205ENST00000474256 SYNGAP1Q96PV0 1343 aa18.68■□□□□ 0.58
CDPF1-205ENST00000474256 FRMPD3Q5JV73 1810 aa18.67■□□□□ 0.58
CDPF1-205ENST00000474256 KBTBD13C9JR72 458 aa18.67■□□□□ 0.58
CDPF1-205ENST00000474256 SNAI1O95863 264 aaPredicted RBP18.67■□□□□ 0.58
CDPF1-205ENST00000474256 RARBP10826 455 aa18.67■□□□□ 0.58
CDPF1-205ENST00000474256 ATN1P54259 1190 aaPredicted RBP18.67■□□□□ 0.58
CDPF1-205ENST00000474256 KCTD1Q719H9 257 aa18.67■□□□□ 0.58
CDPF1-205ENST00000474256 ANKRD35Q8N283 1001 aa18.67■□□□□ 0.58
CDPF1-205ENST00000474256 MYH4Q9Y623 1939 aa18.66■□□□□ 0.58
CDPF1-205ENST00000474256 PCP11498 1178 aaKnown RBP18.66■□□□□ 0.58
CDPF1-205ENST00000474256 AKR1A1P14550 325 aa18.66■□□□□ 0.58
CDPF1-205ENST00000474256 MFAP1P55081 439 aaKnown RBP18.66■□□□□ 0.58
CDPF1-205ENST00000474256 SLC39A5Q6ZMH5 540 aa18.66■□□□□ 0.58
CDPF1-205ENST00000474256 RASGRP2Q7LDG7 609 aa18.66■□□□□ 0.58
CDPF1-205ENST00000474256 CHMP4CQ96CF2 233 aa18.66■□□□□ 0.58
CDPF1-205ENST00000474256 FGD4Q96M96 766 aa18.66■□□□□ 0.58
CDPF1-205ENST00000474256 XPNPEP3Q9NQH7 507 aa18.66■□□□□ 0.58
CDPF1-205ENST00000474256 TOMM22Q9NS69 142 aa18.66■□□□□ 0.58
CDPF1-205ENST00000474256 ISY1Q9ULR0 285 aaKnown RBP18.66■□□□□ 0.58
CDPF1-205ENST00000474256 SZT2Q5T011 3432 aa18.65■□□□□ 0.58
CDPF1-205ENST00000474256 RTP1P59025 263 aa18.65■□□□□ 0.58
CDPF1-205ENST00000474256 HAND2P61296 217 aa18.65■□□□□ 0.58
CDPF1-205ENST00000474256 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
CDPF1-205ENST00000474256 SNX17Q15036 470 aa18.65■□□□□ 0.58
CDPF1-205ENST00000474256 RRP12Q5JTH9 1297 aaKnown RBP18.65■□□□□ 0.58
CDPF1-205ENST00000474256 AKNAD1Q5T1N1 836 aa18.65■□□□□ 0.58
CDPF1-205ENST00000474256 DCAF4Q8WV16 495 aa18.65■□□□□ 0.58
CDPF1-205ENST00000474256 AGBL1Q96MI9 1066 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms