RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 XPNPEP3Q9NQH7 507 aa14.34□□□□□ -0.11
COL16A1-210ENST00000474000 PRDM5Q9NQX1 630 aaPredicted RBP14.34□□□□□ -0.11
COL16A1-210ENST00000474000 MTMR4Q9NYA4 1195 aa14.34□□□□□ -0.11
COL16A1-210ENST00000474000 ATP2A1O14983 1001 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 ZBED4O75132 1171 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 TTLL1O95922 423 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 ZNF865P0CJ78 1059 aaPredicted RBP14.33□□□□□ -0.12
COL16A1-210ENST00000474000 SLC4A3P48751 1232 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 SNX17Q15036 470 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 TRIM60Q495X7 471 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 C1orf53Q5VUE5 145 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 CPXCR1Q8N123 301 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 BADQ92934 168 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 KIFC2Q96AC6 838 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 DDX11Q96FC9 970 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 CDX2Q99626 313 aaPredicted RBP14.33□□□□□ -0.12
COL16A1-210ENST00000474000 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 CNPY2Q9Y2B0 182 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 VCANP13611 3396 aa14.33□□□□□ -0.12
COL16A1-210ENST00000474000 PGK1P00558 417 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 PDE4BQ07343 736 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 ZMYM1Q5SVZ6 1142 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 RNF180Q86T96 592 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 MSL3Q8N5Y2 521 aaKnown RBP14.32□□□□□ -0.12
COL16A1-210ENST00000474000 NEDD1Q8NHV4 660 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 FSD1Q9BTV5 496 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 RAVER2Q9HCJ3 691 aaKnown RBP14.32□□□□□ -0.12
COL16A1-210ENST00000474000 FEM1BQ9UK73 627 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 SYNPO2Q9UMS6 1093 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 PHF24Q9UPV7 400 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 CTDP1Q9Y5B0 961 aaPredicted RBP14.32□□□□□ -0.12
COL16A1-210ENST00000474000 EYSQ5T1H1 3165 aa14.32□□□□□ -0.12
COL16A1-210ENST00000474000 DNAJC25-GNG10A0A024R161 153 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 TRIM43BA6NCK2 446 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 SNAI1O95863 264 aaPredicted RBP14.31□□□□□ -0.12
COL16A1-210ENST00000474000 SLC3A2P08195 630 aaKnown RBP14.31□□□□□ -0.12
COL16A1-210ENST00000474000 TSPY3P0CV98 308 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 TSPY8P0CW00 308 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 AKR1A1P14550 325 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 TFAP4Q01664 338 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 PPARAQ07869 468 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 SLFN13Q68D06 897 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 LRRC47Q8N1G4 583 aaKnown RBP14.31□□□□□ -0.12
COL16A1-210ENST00000474000 GMCL1P1Q8NEA9 526 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 TRIM43Q96BQ3 446 aaPredicted RBP14.31□□□□□ -0.12
COL16A1-210ENST00000474000 NAPBQ9H115 298 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 SLC38A10Q9HBR0 1119 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 PDLIM7Q9NR12 457 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 RLFQ13129 1914 aa14.31□□□□□ -0.12
COL16A1-210ENST00000474000 A0A0G2JMZ2 1700 aa14.3□□□□□ -0.12
COL16A1-210ENST00000474000 BMP3P12645 472 aa14.3□□□□□ -0.12
COL16A1-210ENST00000474000 MX1P20591 662 aa14.3□□□□□ -0.12
COL16A1-210ENST00000474000 TLE2Q04725 743 aa14.3□□□□□ -0.12
COL16A1-210ENST00000474000 MAMDC4Q6UXC1 1216 aa14.3□□□□□ -0.12
COL16A1-210ENST00000474000 LENG1Q96BZ8 264 aaPredicted RBP14.3□□□□□ -0.12
COL16A1-210ENST00000474000 FAM184BQ9ULE4 1060 aa14.3□□□□□ -0.12
COL16A1-210ENST00000474000 ZNF236Q9UL36 1845 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 SPTBN5Q9NRC6 3674 aaKnown RBP14.29□□□□□ -0.12
COL16A1-210ENST00000474000 TMEM232C9JQI7 657 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 ITGB8P26012 769 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 OAZ1P54368 228 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 ANKRD45Q5TZF3 282 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 ZNF467Q7Z7K2 595 aaPredicted RBP14.29□□□□□ -0.12
COL16A1-210ENST00000474000 ANKRD35Q8N283 1001 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 CHST13Q8NET6 341 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 MYLIPQ8WY64 445 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 TTYH1Q9H313 450 aaPredicted RBP14.29□□□□□ -0.12
COL16A1-210ENST00000474000 INCENPQ9NQS7 918 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 FBXO40Q9UH90 709 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 TACC3Q9Y6A5 838 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 SYNGAP1Q96PV0 1343 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 LTBP2Q14767 1821 aa14.29□□□□□ -0.12
COL16A1-210ENST00000474000 CDH23Q9H251 3354 aa14.28□□□□□ -0.12
COL16A1-210ENST00000474000 A0A1W2PQ45 241 aaPredicted RBP14.28□□□□□ -0.12
COL16A1-210ENST00000474000 A0A1W2PQY0 241 aa14.28□□□□□ -0.12
COL16A1-210ENST00000474000 FOXP2O15409 715 aa14.28□□□□□ -0.12
COL16A1-210ENST00000474000 ADAMTS4O75173 837 aa14.28□□□□□ -0.12
COL16A1-210ENST00000474000 MCCP23508 829 aa14.28□□□□□ -0.12
COL16A1-210ENST00000474000 SMAD3P84022 425 aaKnown RBP14.28□□□□□ -0.12
COL16A1-210ENST00000474000 CCDC129Q6ZRS4 1044 aa14.28□□□□□ -0.12
COL16A1-210ENST00000474000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL16A1-210ENST00000474000 CHMP4CQ96CF2 233 aa14.28□□□□□ -0.12
COL16A1-210ENST00000474000 TSEN34Q9BSV6 310 aaKnown RBP14.28□□□□□ -0.12
COL16A1-210ENST00000474000 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
COL16A1-210ENST00000474000 BAZ2AQ9UIF9 1905 aaKnown RBP14.28□□□□□ -0.12
COL16A1-210ENST00000474000 ZHX1Q9UKY1 873 aaPredicted RBP14.28□□□□□ -0.12
COL16A1-210ENST00000474000 PLIN4Q96Q06 1357 aa14.27□□□□□ -0.12
COL16A1-210ENST00000474000 SALL3Q9BXA9 1300 aa14.27□□□□□ -0.12
COL16A1-210ENST00000474000 CLTBP09497 229 aa14.27□□□□□ -0.13
COL16A1-210ENST00000474000 FDX1P10109 184 aa14.27□□□□□ -0.13
COL16A1-210ENST00000474000 SLC1A4P43007 532 aa14.27□□□□□ -0.13
COL16A1-210ENST00000474000 STAT2P52630 851 aa14.27□□□□□ -0.13
COL16A1-210ENST00000474000 ACLYP53396 1101 aa14.27□□□□□ -0.13
COL16A1-210ENST00000474000 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
COL16A1-210ENST00000474000 CTDSPL2Q05D32 466 aa14.27□□□□□ -0.13
COL16A1-210ENST00000474000 ACVR2BQ13705 512 aa14.27□□□□□ -0.13
COL16A1-210ENST00000474000 KCNA10Q16322 511 aa14.27□□□□□ -0.13
COL16A1-210ENST00000474000 CCSAPQ6IQ19 270 aaPredicted RBP14.27□□□□□ -0.13
COL16A1-210ENST00000474000 KLHDC9Q8NEP7 349 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms