RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 RTP1P59025 263 aa14.21□□□□□ -0.13
SMPD4-217ENST00000473720 PRPF38AQ8NAV1 312 aaKnown RBP14.21□□□□□ -0.13
SMPD4-217ENST00000473720 FERMT2Q96AC1 680 aa14.21□□□□□ -0.13
SMPD4-217ENST00000473720 DDX11Q96FC9 970 aa14.21□□□□□ -0.13
SMPD4-217ENST00000473720 INCENPQ9NQS7 918 aa14.21□□□□□ -0.13
SMPD4-217ENST00000473720 MTMR4Q9NYA4 1195 aa14.21□□□□□ -0.13
SMPD4-217ENST00000473720 RIPK3Q9Y572 518 aa14.21□□□□□ -0.13
SMPD4-217ENST00000473720 RANBP2P49792 3224 aaKnown RBP14.21□□□□□ -0.13
SMPD4-217ENST00000473720 LCTP09848 1927 aa14.21□□□□□ -0.14
SMPD4-217ENST00000473720 TSPY2A6NKD2 308 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 IGHA2P01877 340 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 TAL1P17542 331 aaPredicted RBP14.2□□□□□ -0.14
SMPD4-217ENST00000473720 BMP8BP34820 402 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 SLFN13Q68D06 897 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 B4GALNT3Q6L9W6 998 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 LENG1Q96BZ8 264 aaPredicted RBP14.2□□□□□ -0.14
SMPD4-217ENST00000473720 TEX13BQ9BXU2 312 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 PRDM5Q9NQX1 630 aaPredicted RBP14.2□□□□□ -0.14
SMPD4-217ENST00000473720 TOMM22Q9NS69 142 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 HOMER2Q9NSB8 354 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 PRKAG2Q9UGJ0 569 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 LAMA4Q16363 1823 aa14.2□□□□□ -0.14
SMPD4-217ENST00000473720 SALL3Q9BXA9 1300 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 TRIM6-TRIM34B2RNG4 842 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 COPB2P35606 906 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 ADCYAP1R1P41586 468 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 PDE1AP54750 535 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 LRRC41Q15345 812 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 ZNF792Q3KQV3 632 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 VPS53Q5VIR6 699 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 TDHQ8IZJ6 230 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 RILPL2Q969X0 211 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 EVI5LQ96CN4 794 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 LBHD1Q9BQE6 289 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-217ENST00000473720 TINF2Q9BSI4 451 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 LNPKQ9C0E8 428 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 XPNPEP3Q9NQH7 507 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 FEM1BQ9UK73 627 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 STX8Q9UNK0 236 aa14.19□□□□□ -0.14
SMPD4-217ENST00000473720 TMEM232C9JQI7 657 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 RANBP6O60518 1105 aaKnown RBP14.18□□□□□ -0.14
SMPD4-217ENST00000473720 NMT2O60551 498 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 PGK1P00558 417 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 RARBP10826 455 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 BMP3P12645 472 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 RRP12Q5JTH9 1297 aaKnown RBP14.18□□□□□ -0.14
SMPD4-217ENST00000473720 SLC39A5Q6ZMH5 540 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 ANKRD35Q8N283 1001 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 MKL1Q969V6 931 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 FAM227BQ96M60 508 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 ZHX1Q9UKY1 873 aaPredicted RBP14.18□□□□□ -0.14
SMPD4-217ENST00000473720 CNPY2Q9Y2B0 182 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 PLIN4Q96Q06 1357 aa14.18□□□□□ -0.14
SMPD4-217ENST00000473720 FOXP2O15409 715 aa14.17□□□□□ -0.14
SMPD4-217ENST00000473720 MCCP23508 829 aa14.17□□□□□ -0.14
SMPD4-217ENST00000473720 SLC1A4P43007 532 aa14.17□□□□□ -0.14
SMPD4-217ENST00000473720 SNAP25P60880 206 aa14.17□□□□□ -0.14
SMPD4-217ENST00000473720 TRIM60Q495X7 471 aa14.17□□□□□ -0.14
SMPD4-217ENST00000473720 KCTD1Q719H9 257 aa14.17□□□□□ -0.14
SMPD4-217ENST00000473720 RASGRP2Q7LDG7 609 aa14.17□□□□□ -0.14
SMPD4-217ENST00000473720 DIS3Q9Y2L1 958 aaKnown RBP14.17□□□□□ -0.14
SMPD4-217ENST00000473720 LRRC37A2A6NM11 1700 aa14.16□□□□□ -0.14
SMPD4-217ENST00000473720 A0A0D9SFI3 127 aa14.16□□□□□ -0.14
SMPD4-217ENST00000473720 AKR1A1P14550 325 aa14.16□□□□□ -0.14
SMPD4-217ENST00000473720 STAT2P52630 851 aa14.16□□□□□ -0.14
SMPD4-217ENST00000473720 HDAC1Q13547 482 aaPredicted RBP14.16□□□□□ -0.14
SMPD4-217ENST00000473720 CCDC174Q6PII3 467 aa14.16□□□□□ -0.14
SMPD4-217ENST00000473720 Q7L0L9 218 aa14.16□□□□□ -0.14
SMPD4-217ENST00000473720 GMCL1P1Q8NEA9 526 aa14.16□□□□□ -0.14
SMPD4-217ENST00000473720 SLC38A10Q9HBR0 1119 aa14.16□□□□□ -0.14
SMPD4-217ENST00000473720 TACC3Q9Y6A5 838 aa14.16□□□□□ -0.14
SMPD4-217ENST00000473720 ZNF865P0CJ78 1059 aaPredicted RBP14.15□□□□□ -0.14
SMPD4-217ENST00000473720 HAND2P61296 217 aa14.15□□□□□ -0.14
SMPD4-217ENST00000473720 NMIQ13287 307 aaPredicted RBP14.15□□□□□ -0.14
SMPD4-217ENST00000473720 CCDC96Q2M329 555 aa14.15□□□□□ -0.14
SMPD4-217ENST00000473720 MCMDC2Q4G0Z9 681 aa14.15□□□□□ -0.14
SMPD4-217ENST00000473720 RNF180Q86T96 592 aa14.15□□□□□ -0.14
SMPD4-217ENST00000473720 CHURC1Q8WUH1 139 aa14.15□□□□□ -0.14
SMPD4-217ENST00000473720 AGBL1Q96MI9 1066 aa14.15□□□□□ -0.14
SMPD4-217ENST00000473720 IL17RBQ9NRM6 502 aa14.15□□□□□ -0.14
SMPD4-217ENST00000473720 HELLSQ9NRZ9 838 aa14.15□□□□□ -0.14
SMPD4-217ENST00000473720 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMPD4-217ENST00000473720 SNAI1O95863 264 aaPredicted RBP14.14□□□□□ -0.15
SMPD4-217ENST00000473720 ALAS1P13196 640 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 CNTN2Q02246 1040 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 FAM160B2Q86V87 743 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 DEFB123Q8N688 67 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 STAG1Q8WVM7 1258 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 RWDD1Q9H446 243 aaPredicted RBP14.14□□□□□ -0.15
SMPD4-217ENST00000473720 FBXO40Q9UH90 709 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 NRBP1Q9UHY1 535 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 FAM184BQ9ULE4 1060 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 LAMA3Q16787 3333 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 SYNGAP1Q96PV0 1343 aa14.14□□□□□ -0.15
SMPD4-217ENST00000473720 MYH7BA7E2Y1 1941 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 DNAJC25-GNG10A0A024R161 153 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 A0A1W2PQ45 241 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-217ENST00000473720 A0A1W2PQY0 241 aa14.13□□□□□ -0.15
SMPD4-217ENST00000473720 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms