RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 KCTD1Q719H9 257 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
C1orf56-203ENST00000473308 NPLOC4Q8TAT6 608 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 DCAF4Q8WV16 495 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 MAP4K1Q92918 833 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 KIFC2Q96AC6 838 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 SHISA4Q96DD7 197 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 TTC14Q96N46 770 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 ZKSCAN3Q9BRR0 538 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 SLC38A10Q9HBR0 1119 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 PAK6Q9NQU5 681 aaPredicted RBP10.79□□□□□ -0.68
C1orf56-203ENST00000473308 FLRT1Q9NZU1 646 aa10.79□□□□□ -0.68
C1orf56-203ENST00000473308 ZNFX1Q9P2E3 1918 aaKnown RBP10.78□□□□□ -0.68
C1orf56-203ENST00000473308 COBLO75128 1261 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 IGHA2P01877 340 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 CENPBP07199 599 aaPredicted RBP10.78□□□□□ -0.68
C1orf56-203ENST00000473308 CYP21A2P08686 494 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 GJA8P48165 433 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 CACNB2Q08289 660 aaPredicted RBP10.78□□□□□ -0.68
C1orf56-203ENST00000473308 CCDC178Q5BJE1 867 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 MAP3K21Q5TCX8 1036 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 SNRNP48Q6IEG0 339 aaKnown RBP10.78□□□□□ -0.68
C1orf56-203ENST00000473308 FAM160B2Q86V87 743 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 DGKHQ86XP1 1220 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 ABRAQ8N0Z2 381 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 U2AF1L4Q8WU68 220 aaKnown RBP10.78□□□□□ -0.68
C1orf56-203ENST00000473308 CHURC1Q8WUH1 139 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 ANKS1AQ92625 1134 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 ESYT1Q9BSJ8 1104 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 TEX13BQ9BXU2 312 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 KRT23Q9C075 422 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 CNNM2Q9H8M5 875 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 ZSWIM5Q9P217 1185 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 ISY1Q9ULR0 285 aaKnown RBP10.78□□□□□ -0.68
C1orf56-203ENST00000473308 MTMR7Q9Y216 660 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 RIPK3Q9Y572 518 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 U3KPZ7 1027 aaPredicted RBP10.78□□□□□ -0.68
C1orf56-203ENST00000473308 RPTORQ8N122 1335 aa10.78□□□□□ -0.68
C1orf56-203ENST00000473308 ZNF236Q9UL36 1845 aa10.77□□□□□ -0.68
C1orf56-203ENST00000473308 SGPL1O95470 568 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 FDX1P10109 184 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 FCER1AP12319 257 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
C1orf56-203ENST00000473308 COPB2P35606 906 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 OAZ1P54368 228 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 CCDC96Q2M329 555 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 TTBK2Q6IQ55 1244 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 BTNL9Q6UXG8 535 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 DPP9Q86TI2 863 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 IQCA1Q86XH1 822 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 CPXCR1Q8N123 301 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 ENAHQ8N8S7 591 aaPredicted RBP10.77□□□□□ -0.69
C1orf56-203ENST00000473308 ZSCAN10Q96SZ4 725 aaPredicted RBP10.77□□□□□ -0.69
C1orf56-203ENST00000473308 MMP19Q99542 508 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 LSG1Q9H089 658 aaKnown RBP10.77□□□□□ -0.69
C1orf56-203ENST00000473308 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.77□□□□□ -0.69
C1orf56-203ENST00000473308 RAVER2Q9HCJ3 691 aaKnown RBP10.77□□□□□ -0.69
C1orf56-203ENST00000473308 CTDP1Q9Y5B0 961 aaPredicted RBP10.77□□□□□ -0.69
C1orf56-203ENST00000473308 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.69
C1orf56-203ENST00000473308 CEP290O15078 2479 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 SNHG28P0DPA3 235 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 PDHBP11177 359 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 IKQ13123 557 aaPredicted RBP10.76□□□□□ -0.69
C1orf56-203ENST00000473308 ERICH6BQ5W0A0 696 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 OLFML2BQ68BL8 750 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 STOX1Q6ZVD7 989 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 CYB5R4Q7L1T6 521 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.69
C1orf56-203ENST00000473308 DEFB118Q96PH6 123 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 HMX1Q9NP08 348 aaPredicted RBP10.76□□□□□ -0.69
C1orf56-203ENST00000473308 PRR12Q9ULL5 1215 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 RBM8AQ9Y5S9 174 aaKnown RBP10.76□□□□□ -0.69
C1orf56-203ENST00000473308 ZNF536O15090 1300 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 TNKSO95271 1327 aa10.76□□□□□ -0.69
C1orf56-203ENST00000473308 FRMPD2Q68DX3 1309 aaPredicted RBP10.76□□□□□ -0.69
C1orf56-203ENST00000473308 SMCHD1A6NHR9 2005 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 E7EWF7 191 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 PGK2P07205 417 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 CCND3P30281 292 aaPredicted RBP10.75□□□□□ -0.69
C1orf56-203ENST00000473308 CYP2C19P33261 490 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 SLC16A2P36021 539 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 SLC4A3P48751 1232 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 SNAP25P60880 206 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 ZNF543Q08ER8 600 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 TRDNQ13061 729 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 KCTD2Q14681 263 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 ZNF792Q3KQV3 632 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 MFSD14CQ5VZR4 134 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 KIAA1211Q6ZU35 1233 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 UBE2Q1Q7Z7E8 422 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 PNMA1Q8ND90 353 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 AGBL1Q96MI9 1066 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 CRISPLD2Q9H0B8 497 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 KAT14Q9H8E8 782 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 GPCPD1Q9NPB8 672 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 PPP4R2Q9NY27 417 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 SLC5A4Q9NY91 659 aa10.75□□□□□ -0.69
C1orf56-203ENST00000473308 CDC45O75419 566 aa10.74□□□□□ -0.69
C1orf56-203ENST00000473308 TFRCP02786 760 aaKnown RBP10.74□□□□□ -0.69
C1orf56-203ENST00000473308 CAPN2P17655 700 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms