RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 APBA2Q99767 749 aa4.99□□□□□ -1.61
RGPD6-208ENST00000473101 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.99□□□□□ -1.61
RGPD6-208ENST00000473101 FAM86C1Q9NVL1 165 aa4.99□□□□□ -1.61
RGPD6-208ENST00000473101 LRP2BPQ9P2M1 347 aa4.99□□□□□ -1.61
RGPD6-208ENST00000473101 SUCOQ9UBS9 1254 aaKnown RBP4.99□□□□□ -1.61
RGPD6-208ENST00000473101 U3KQE9 123 aa4.99□□□□□ -1.61
RGPD6-208ENST00000473101 TP53P04637 393 aaPredicted RBP4.98□□□□□ -1.61
RGPD6-208ENST00000473101 NEFMP07197 916 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 VIL1P09327 827 aaKnown RBP4.98□□□□□ -1.61
RGPD6-208ENST00000473101 JUNBP17275 347 aaPredicted RBP4.98□□□□□ -1.61
RGPD6-208ENST00000473101 CNGA1P29973 690 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 C21orf62-AS1Q17RA5 79 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 ZNF792Q3KQV3 632 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 HEATR6Q6AI08 1181 aaKnown RBP4.98□□□□□ -1.61
RGPD6-208ENST00000473101 WFDC3Q8IUB2 231 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 NIM1KQ8IY84 436 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 TMEM192Q8IY95 271 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 RPUSD2Q8IZ73 545 aaKnown RBP4.98□□□□□ -1.61
RGPD6-208ENST00000473101 TOP6BLQ8N6T0 577 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 SMARCC1Q92922 1105 aaPredicted RBP4.98□□□□□ -1.61
RGPD6-208ENST00000473101 NINJ1Q92982 152 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 ISL2Q96A47 359 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 DUSP23Q9BVJ7 150 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 PCOLCE2Q9UKZ9 415 aa4.98□□□□□ -1.61
RGPD6-208ENST00000473101 A0A1W2PQU0 124 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 RFPL3O75679 317 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 UBOX5O94941 541 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 CD8BP10966 210 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 ITIH2P19823 946 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 NTF4P34130 210 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 CAP2P40123 477 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 HSP90AA2PQ14568 343 aaPredicted RBP4.97□□□□□ -1.61
RGPD6-208ENST00000473101 NKG7Q16617 165 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 TDRD10Q5VZ19 366 aaKnown RBP4.97□□□□□ -1.61
RGPD6-208ENST00000473101 KRT26Q7Z3Y9 468 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
RGPD6-208ENST00000473101 CYB5D2Q8WUJ1 264 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 PPP1R14AQ96A00 147 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 MFSD3Q96ES6 412 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 MISP3Q96FF7 219 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 HAUS7Q99871 368 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 DPH2Q9BQC3 489 aaPredicted RBP4.97□□□□□ -1.61
RGPD6-208ENST00000473101 DHRS4Q9BTZ2 278 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 FBRSQ9HAH7 460 aa4.97□□□□□ -1.61
RGPD6-208ENST00000473101 DDX56Q9NY93 547 aaKnown RBP4.97□□□□□ -1.61
RGPD6-208ENST00000473101 TRAV20A0A0B4J274 112 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 PAPLNO95428 1278 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 CST3P01034 146 aaPredicted RBP4.96□□□□□ -1.62
RGPD6-208ENST00000473101 EPHX1P07099 455 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 L1CAMP32004 1257 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 PABPC4Q13310 644 aaKnown RBP eCLIP4.96□□□□□ -1.62
RGPD6-208ENST00000473101 PRAMEF13Q5VWM6 474 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 NOL8Q76FK4 1167 aaKnown RBP4.96□□□□□ -1.62
RGPD6-208ENST00000473101 ADAT2Q7Z6V5 191 aaKnown RBP4.96□□□□□ -1.62
RGPD6-208ENST00000473101 PPFIBP1Q86W92 1011 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 SCUBE1Q8IWY4 988 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 DHX37Q8IY37 1157 aaKnown RBP4.96□□□□□ -1.62
RGPD6-208ENST00000473101 CCDC144CPQ8IYA2 1237 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 LRRN4CLQ8ND94 238 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 BAHD1Q8TBE0 780 aaPredicted RBP4.96□□□□□ -1.62
RGPD6-208ENST00000473101 RC3H2Q9HBD1 1191 aaKnown RBP4.96□□□□□ -1.62
RGPD6-208ENST00000473101 KLHL42Q9P2K6 505 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 SUSD2Q9UGT4 822 aa4.96□□□□□ -1.62
RGPD6-208ENST00000473101 C9IYK1 514 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 BIN1O00499 593 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 PLD2O14939 933 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 PPM1BO75688 479 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 CEACAM5P06731 702 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 MYCLP1P12525 358 aaPredicted RBP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 FUT4P22083 530 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 OXCT1P55809 520 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 PPP2R2AP63151 447 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 SLBPQ14493 270 aaKnown RBP eCLIP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 IFI16Q16666 785 aaKnown RBP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 AOC3Q16853 763 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 PLEKHG6Q3KR16 790 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 TM4SF20Q53R12 229 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 CT47A1Q5JQC4 288 aaPredicted RBP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 AXDND1Q5T1B0 1012 aaPredicted RBP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 FOXB2Q5VYV0 432 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 CHAC2Q8WUX2 184 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 KISS1RQ969F8 398 aaPredicted RBP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 HRASLS5Q96KN8 279 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 EXOC2Q96KP1 924 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 AARSD1Q9BTE6 412 aaKnown RBP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 FOXQ1Q9C009 403 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 GBP3Q9H0R5 595 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 NCOA5Q9HCD5 579 aaKnown RBP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 ARHGEF4Q9NR80 690 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 TYW1Q9NV66 732 aaKnown RBP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 ADAMTS6Q9UKP5 1117 aa4.95□□□□□ -1.62
RGPD6-208ENST00000473101 MRPS23Q9Y3D9 190 aaKnown RBP4.95□□□□□ -1.62
RGPD6-208ENST00000473101 TRBV23-1A0A0A0MS06 115 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 NOP56O00567 594 aaKnown RBP4.94□□□□□ -1.62
RGPD6-208ENST00000473101 IRS4O14654 1257 aaPredicted RBP4.94□□□□□ -1.62
RGPD6-208ENST00000473101 RAPGEF3O95398 923 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 S100BP04271 92 aaPredicted RBP4.94□□□□□ -1.62
RGPD6-208ENST00000473101 ITGAVP06756 1048 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 C8AP07357 584 aa4.94□□□□□ -1.62
RGPD6-208ENST00000473101 RNASE1P07998 156 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms