RNA–Protein interactions for RNA: ENST00000472921.1

CCDC13-204, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 314 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-204ENST00000472921 ZNF408Q9H9D4 720 aa13.92□□□□□ -0.18
CCDC13-204ENST00000472921 TMOD4Q9NZQ9 345 aa13.92□□□□□ -0.18
CCDC13-204ENST00000472921 ATAD5Q96QE3 1844 aa13.92□□□□□ -0.18
CCDC13-204ENST00000472921 ZBTB5O15062 677 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 RAD21O60216 631 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 DTNBO60941 627 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
CCDC13-204ENST00000472921 ZBTB48P10074 688 aaPredicted RBP13.91□□□□□ -0.18
CCDC13-204ENST00000472921 YY1P25490 414 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 HOXA7P31268 230 aaPredicted RBP13.91□□□□□ -0.18
CCDC13-204ENST00000472921 TRAF1Q13077 416 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 ZYXQ15942 572 aaKnown RBP13.91□□□□□ -0.18
CCDC13-204ENST00000472921 CATSPERGQ6ZRH7 1159 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
CCDC13-204ENST00000472921 TEX2Q8IWB9 1127 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 PIGSQ96S52 555 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 RANBP17Q9H2T7 1088 aaKnown RBP13.91□□□□□ -0.18
CCDC13-204ENST00000472921 CPVLQ9H3G5 476 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 BARHL2Q9NY43 387 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 PRR12Q9ULL5 1215 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 ADAMTS5Q9UNA0 930 aa13.91□□□□□ -0.18
CCDC13-204ENST00000472921 MYPNQ86TC9 1320 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 USP17L15C9J2P7 530 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 USP17L13C9JLJ4 530 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 USP17L11C9JVI0 530 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 USP17L18D6R9N7 530 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 USP17L22D6RA61 530 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 USP17L17D6RBQ6 530 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 USP17L19D6RCP7 530 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 USP17L20D6RJB6 530 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 H3BQV1 296 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 SLC16A2P36021 539 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 GJA5P36382 358 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 HMGCS2P54868 508 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 USP17L24Q0WX57 530 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 PKP1Q13835 747 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 TRIM29Q14134 588 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 IFFO2Q5TF58 517 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 KRT40Q6A162 431 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 GALNT17Q6IS24 598 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 CLEC17AQ6ZS10 378 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 WNK4Q96J92 1243 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 HHIPL1Q96JK4 782 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 PHF20Q9BVI0 1012 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 ZSCAN16Q9H4T2 348 aaPredicted RBP13.9□□□□□ -0.18
CCDC13-204ENST00000472921 RPAP3Q9H6T3 665 aaPredicted RBP13.9□□□□□ -0.18
CCDC13-204ENST00000472921 VAT1LQ9HCJ6 419 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 SEC63Q9UGP8 760 aaKnown RBP13.9□□□□□ -0.18
CCDC13-204ENST00000472921 PNMA2Q9UL42 364 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 MYH4Q9Y623 1939 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 PHIPQ8WWQ0 1821 aa13.9□□□□□ -0.18
CCDC13-204ENST00000472921 ESYT2A0FGR8 921 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 MMP1P03956 469 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 MOGSQ13724 837 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 COG2Q14746 738 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 PPP1R18Q6NYC8 613 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 SAPCD2Q86UD0 394 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 ZNF784Q8NCA9 323 aaPredicted RBP13.89□□□□□ -0.19
CCDC13-204ENST00000472921 CCDC12Q8WUD4 166 aaPredicted RBP13.89□□□□□ -0.19
CCDC13-204ENST00000472921 SHISA4Q96DD7 197 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 AIFM3Q96NN9 605 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 SLF1Q9BQI6 1058 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 HOXC10Q9NYD6 342 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 PPP1R9AQ9ULJ8 1098 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
CCDC13-204ENST00000472921 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 STXBP3O00186 592 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 F13A1P00488 732 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 U2AF2P26368 475 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC13-204ENST00000472921 CALML3P27482 149 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 DSG3P32926 999 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 GTF2A2P52657 109 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 HUNKP57058 714 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 CDC37Q16543 378 aaPredicted RBP13.88□□□□□ -0.19
CCDC13-204ENST00000472921 QRICH1Q2TAL8 776 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 SPRYD7Q5W111 196 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 WWC2Q6AWC2 1192 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 DAGLBQ8NCG7 672 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 CCDC148Q8NFR7 591 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 AMNQ9BXJ7 453 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 ZMYND12Q9H0C1 365 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 SLC38A10Q9HBR0 1119 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 SLC45A1Q9Y2W3 748 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 ATP6V1DQ9Y5K8 247 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 OTOFQ9HC10 1997 aa13.88□□□□□ -0.19
CCDC13-204ENST00000472921 TESPA1A2RU30 521 aaPredicted RBP13.87□□□□□ -0.19
CCDC13-204ENST00000472921 VPS37CA5D8V6 355 aaPredicted RBP13.87□□□□□ -0.19
CCDC13-204ENST00000472921 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
CCDC13-204ENST00000472921 PPP1R11O60927 126 aaPredicted RBP13.87□□□□□ -0.19
CCDC13-204ENST00000472921 CETPP11597 493 aa13.87□□□□□ -0.19
CCDC13-204ENST00000472921 OAZ1P54368 228 aa13.87□□□□□ -0.19
CCDC13-204ENST00000472921 IKQ13123 557 aaPredicted RBP13.87□□□□□ -0.19
CCDC13-204ENST00000472921 RESTQ13127 1097 aa13.87□□□□□ -0.19
CCDC13-204ENST00000472921 PABPC4Q13310 644 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms