RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 FTOQ9C0B1 505 aaKnown RBP eCLIP16.76■□□□□ 0.27
HIF3A-206ENST00000472815 TMX2Q9Y320 296 aa16.76■□□□□ 0.27
HIF3A-206ENST00000472815 BMP3P12645 472 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 ZNF445P59923 1031 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 TRAF1Q13077 416 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 KCTD1Q719H9 257 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 RASGRP2Q7LDG7 609 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 ADGRF4Q8IZF3 695 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 OXER1Q8TDS5 423 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 ZNF341Q9BYN7 854 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 ZMYND12Q9H0C1 365 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 GLT8D2Q9H1C3 349 aa16.75■□□□□ 0.27
HIF3A-206ENST00000472815 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.75■□□□□ 0.27
HIF3A-206ENST00000472815 CCDC194A0A1B0GVG4 234 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 GOLGA6L3A6NEY3 463 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 TRIM75PA6NK02 468 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 ZBTB5O15062 677 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 NDUFB10O96000 172 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 EPS15P42566 896 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 IKQ13123 557 aaPredicted RBP16.74■□□□□ 0.27
HIF3A-206ENST00000472815 RRP1BQ14684 758 aaKnown RBP16.74■□□□□ 0.27
HIF3A-206ENST00000472815 SLC35G1Q2M3R5 365 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 SIAH1Q8IUQ4 282 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 TRPM4Q8TD43 1214 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 PGBD1Q96JS3 809 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 GGA3Q9NZ52 723 aa16.74■□□□□ 0.27
HIF3A-206ENST00000472815 NPY5RQ15761 445 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 SHROOM1Q2M3G4 852 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-206ENST00000472815 SUPT20HL1Q3ZLR7 823 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 L1TD1Q5T7N2 865 aaKnown RBP16.73■□□□□ 0.27
HIF3A-206ENST00000472815 CDAN1Q8IWY9 1227 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
HIF3A-206ENST00000472815 L3MBTL3Q96JM7 780 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-206ENST00000472815 CPVLQ9H3G5 476 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 JMJD4Q9H9V9 463 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 PCDHA7Q9UN72 937 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 MORC2Q9Y6X9 1032 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-206ENST00000472815 SMCO2A6NFE2 343 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 KRT25Q7Z3Z0 450 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
HIF3A-206ENST00000472815 TNFRSF25Q93038 417 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 SHISA4Q96DD7 197 aa16.73■□□□□ 0.27
HIF3A-206ENST00000472815 STAT2P52630 851 aa16.72■□□□□ 0.27
HIF3A-206ENST00000472815 JAG1P78504 1218 aa16.72■□□□□ 0.27
HIF3A-206ENST00000472815 PIK3AP1Q6ZUJ8 805 aa16.72■□□□□ 0.27
HIF3A-206ENST00000472815 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
HIF3A-206ENST00000472815 DCPSQ96C86 337 aaKnown RBP16.72■□□□□ 0.27
HIF3A-206ENST00000472815 MTMR8Q96EF0 704 aa16.72■□□□□ 0.27
HIF3A-206ENST00000472815 FEZ1Q99689 392 aa16.72■□□□□ 0.27
HIF3A-206ENST00000472815 NUP62CLQ9H1M0 184 aa16.72■□□□□ 0.27
HIF3A-206ENST00000472815 VCPKMTQ9H867 229 aa16.72■□□□□ 0.27
HIF3A-206ENST00000472815 DOCK1Q14185 1865 aa16.72■□□□□ 0.27
HIF3A-206ENST00000472815 ASTN2O75129 1339 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-206ENST00000472815 CUTAO60888 179 aa16.71■□□□□ 0.27
HIF3A-206ENST00000472815 TOB1P50616 345 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-206ENST00000472815 ADCY7P51828 1080 aa16.71■□□□□ 0.27
HIF3A-206ENST00000472815 FAM160A1Q05DH4 1040 aa16.71■□□□□ 0.27
HIF3A-206ENST00000472815 PTPAQ15257 358 aa16.71■□□□□ 0.27
HIF3A-206ENST00000472815 TTC38Q5R3I4 469 aa16.71■□□□□ 0.27
HIF3A-206ENST00000472815 NBPF12Q5TAG4 269 aaPredicted RBP16.71■□□□□ 0.27
HIF3A-206ENST00000472815 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
HIF3A-206ENST00000472815 TTBK2Q6IQ55 1244 aa16.71■□□□□ 0.27
HIF3A-206ENST00000472815 BTNL9Q6UXG8 535 aa16.71■□□□□ 0.27
HIF3A-206ENST00000472815 KRI1Q8N9T8 703 aaKnown RBP16.71■□□□□ 0.27
HIF3A-206ENST00000472815 DACT1Q9NYF0 836 aa16.71■□□□□ 0.27
HIF3A-206ENST00000472815 POLR2AP24928 1970 aaKnown RBP16.71■□□□□ 0.26
HIF3A-206ENST00000472815 A0A1W2PRG0 241 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 SYCE3A1L190 88 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 TMEM232C9JQI7 657 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 KINO60870 393 aaKnown RBP16.7■□□□□ 0.26
HIF3A-206ENST00000472815 VEGFAP15692 232 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-206ENST00000472815 CMA1P23946 247 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 SLC16A2P36021 539 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 LRSAM1Q6UWE0 723 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 FAM160B2Q86V87 743 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 REXO1Q8N1G1 1221 aaKnown RBP16.7■□□□□ 0.26
HIF3A-206ENST00000472815 FSIP1Q8NA03 581 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 LPAR1Q92633 364 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 IQCA1LA6NCM1 817 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 CTAGE5O15320 804 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 PLA2G6O60733 806 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 LIG1P18858 919 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 ATP2B1P20020 1258 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 MARCKSP29966 332 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-206ENST00000472815 ECE1P42892 770 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 MRPL12P52815 198 aaKnown RBP16.7■□□□□ 0.26
HIF3A-206ENST00000472815 CDC37Q16543 378 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-206ENST00000472815 TYW1BQ6NUM6 668 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 USP50Q70EL3 339 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-206ENST00000472815 SULF1Q8IWU6 871 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 CUL5Q93034 780 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 TNMDQ9H2S6 317 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 PICK1Q9NRD5 415 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 PCDHA6Q9UN73 950 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 SCAF8Q9UPN6 1271 aaKnown RBP16.7■□□□□ 0.26
HIF3A-206ENST00000472815 PCDHB6Q9Y5E3 794 aa16.7■□□□□ 0.26
HIF3A-206ENST00000472815 PCDHA8Q9Y5H6 950 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms