RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 PRKAG2Q9UGJ0 569 aa11.73□□□□□ -0.53
NUDCD3-205ENST00000472246 DIS3Q9Y2L1 958 aaKnown RBP11.73□□□□□ -0.53
NUDCD3-205ENST00000472246 PLIN4Q96Q06 1357 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 ERC2O15083 957 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 COPB2P35606 906 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 ZMYM1Q5SVZ6 1142 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 SH3RF1Q7Z6J0 888 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 PRPF38AQ8NAV1 312 aaKnown RBP11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 SLC17A8Q8NDX2 589 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 NAPBQ9H115 298 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 RAVER2Q9HCJ3 691 aaKnown RBP11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 PDLIM7Q9NR12 457 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 MTMR4Q9NYA4 1195 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 NRBP1Q9UHY1 535 aa11.72□□□□□ -0.53
NUDCD3-205ENST00000472246 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 FOXP2O15409 715 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 ZBED4O75132 1171 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 ADAMTS4O75173 837 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 TTLL1O95922 423 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 TSPY3P0CV98 308 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 TSPY8P0CW00 308 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 AKR1A1P14550 325 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 MX1P20591 662 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 PPARAQ07869 468 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 LRRFIP1Q32MZ4 808 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 CCDC129Q6ZRS4 1044 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 BADQ92934 168 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 MKL1Q969V6 931 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 CHMP4CQ96CF2 233 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 NACAP1Q9BZK3 213 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 SLC38A10Q9HBR0 1119 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 ZNF287Q9HBT7 754 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 ZHX1Q9UKY1 873 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 PHF24Q9UPV7 400 aa11.71□□□□□ -0.53
NUDCD3-205ENST00000472246 CDH23Q9H251 3354 aa11.71□□□□□ -0.54
NUDCD3-205ENST00000472246 MCM3APO60318 1980 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 SYNRGQ9UMZ2 1314 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 DNAJC25-GNG10A0A024R161 153 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 A0A1W2PQ45 241 aaPredicted RBP11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 A0A1W2PQY0 241 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 TRIM43BA6NCK2 446 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 ATP2A1O14983 1001 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 SNAI1O95863 264 aaPredicted RBP11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 RRP1P56182 461 aaKnown RBP11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 TLE2Q04725 743 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 PDE4BQ07343 736 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 C9orf50Q5SZB4 431 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 C1orf53Q5VUE5 145 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 SLFN13Q68D06 897 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 RASGRP2Q7LDG7 609 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 RNF180Q86T96 592 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 GMCL1P1Q8NEA9 526 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 NEDD1Q8NHV4 660 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 TRIM43Q96BQ3 446 aaPredicted RBP11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 DDX11Q96FC9 970 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 FGD4Q96M96 766 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 FEM1BQ9UK73 627 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 ISY1Q9ULR0 285 aaKnown RBP11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 CTDP1Q9Y5B0 961 aaPredicted RBP11.7□□□□□ -0.54
NUDCD3-205ENST00000472246 SYNGAP1Q96PV0 1343 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 MYADML2A6NDP7 307 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 ADCY6O43306 1168 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 BMP3P12645 472 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 ITGB8P26012 769 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 TFAP4Q01664 338 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 SHHQ15465 462 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 MAMDC4Q6UXC1 1216 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 MSL3Q8N5Y2 521 aaKnown RBP11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 FAM161BQ96MY7 647 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 CRBNQ96SW2 442 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 INCENPQ9NQS7 918 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 HOMER2Q9NSB8 354 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 STXBP5LQ9Y2K9 1186 aa11.69□□□□□ -0.54
NUDCD3-205ENST00000472246 TMEM232C9JQI7 657 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 NMT2O60551 498 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 PQBP1O60828 265 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 SLC3A2P08195 630 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 CLTBP09497 229 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 STAT2P52630 851 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 ANKRD45Q5TZF3 282 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 VPS53Q5VIR6 699 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 GUCD1Q96NT3 240 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 SYNPO2Q9UMS6 1093 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 STX8Q9UNK0 236 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 TACC3Q9Y6A5 838 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 UNC80Q8N2C7 3258 aa11.68□□□□□ -0.54
NUDCD3-205ENST00000472246 ZNF536O15090 1300 aa11.67□□□□□ -0.54
NUDCD3-205ENST00000472246 LRRC37A2A6NM11 1700 aa11.67□□□□□ -0.54
NUDCD3-205ENST00000472246 TSPY2A6NKD2 308 aa11.67□□□□□ -0.54
NUDCD3-205ENST00000472246 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
NUDCD3-205ENST00000472246 MCCP23508 829 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms