RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 MMP19Q99542 508 aa17.46■□□□□ 0.39
SSR4-208ENST00000471880 SLC25A27O95847 323 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 CNGA1P29973 690 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 GJA8P48165 433 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 STAT2P52630 851 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 KCTD2Q14681 263 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 NBPF3Q9H094 633 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 IL25Q9H293 177 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 RAVER2Q9HCJ3 691 aaKnown RBP17.45■□□□□ 0.38
SSR4-208ENST00000471880 SLC5A4Q9NY91 659 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 SYNPO2Q9UMS6 1093 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 RPTORQ8N122 1335 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 RAD50Q92878 1312 aa17.45■□□□□ 0.38
SSR4-208ENST00000471880 B4E1Z4 1266 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 STRNO43815 780 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 KDM4AO75164 1064 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 SGPL1O95470 568 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 TOP1P11387 765 aaKnown RBP17.44■□□□□ 0.38
SSR4-208ENST00000471880 PCP11498 1178 aaKnown RBP17.44■□□□□ 0.38
SSR4-208ENST00000471880 RASGRP2Q7LDG7 609 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 RIOX2Q8IUF8 465 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 NPLOC4Q8TAT6 608 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 CHURC1Q8WUH1 139 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 TEX13BQ9BXU2 312 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 HOMER2Q9NSB8 354 aa17.44■□□□□ 0.38
SSR4-208ENST00000471880 MCM3APO60318 1980 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 FARP2O94887 1054 aaPredicted RBP17.43■□□□□ 0.38
SSR4-208ENST00000471880 FGRP09769 529 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 CYP2C19P33261 490 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 CACNB2Q08289 660 aaPredicted RBP17.43■□□□□ 0.38
SSR4-208ENST00000471880 CCDC174Q6PII3 467 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 KIAA1211Q6ZU35 1233 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 UBE2Q1Q7Z7E8 422 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 FAM160B2Q86V87 743 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 IQCA1Q86XH1 822 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 GMCL1Q96IK5 515 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 TMEM47Q9BQJ4 181 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 GPCPD1Q9NPB8 672 aa17.43■□□□□ 0.38
SSR4-208ENST00000471880 ZNF214Q9UL59 606 aaPredicted RBP17.43■□□□□ 0.38
SSR4-208ENST00000471880 FRMPD2Q68DX3 1309 aaPredicted RBP17.43■□□□□ 0.38
SSR4-208ENST00000471880 PGK2P07205 417 aa17.42■□□□□ 0.38
SSR4-208ENST00000471880 CCND3P30281 292 aaPredicted RBP17.42■□□□□ 0.38
SSR4-208ENST00000471880 COPB2P35606 906 aa17.42■□□□□ 0.38
SSR4-208ENST00000471880 SNAP25P60880 206 aa17.42■□□□□ 0.38
SSR4-208ENST00000471880 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
SSR4-208ENST00000471880 DDX11Q96FC9 970 aa17.42■□□□□ 0.38
SSR4-208ENST00000471880 PAK6Q9NQU5 681 aaPredicted RBP17.42■□□□□ 0.38
SSR4-208ENST00000471880 FLRT1Q9NZU1 646 aa17.42■□□□□ 0.38
SSR4-208ENST00000471880 ADAMTS5Q9UNA0 930 aa17.42■□□□□ 0.38
SSR4-208ENST00000471880 SLC16A2P36021 539 aa17.41■□□□□ 0.38
SSR4-208ENST00000471880 PTH1RQ03431 593 aa17.41■□□□□ 0.38
SSR4-208ENST00000471880 TRDNQ13061 729 aa17.41■□□□□ 0.38
SSR4-208ENST00000471880 MAP3K21Q5TCX8 1036 aa17.41■□□□□ 0.38
SSR4-208ENST00000471880 REPS2Q8NFH8 660 aa17.41■□□□□ 0.38
SSR4-208ENST00000471880 DCAF4Q8WV16 495 aa17.41■□□□□ 0.38
SSR4-208ENST00000471880 DPF3Q92784 378 aa17.41■□□□□ 0.38
SSR4-208ENST00000471880 UBAC1Q9BSL1 405 aa17.41■□□□□ 0.38
SSR4-208ENST00000471880 KRT23Q9C075 422 aa17.41■□□□□ 0.38
SSR4-208ENST00000471880 COBLO75128 1261 aa17.4■□□□□ 0.38
SSR4-208ENST00000471880 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
SSR4-208ENST00000471880 ANKRD35Q8N283 1001 aa17.4■□□□□ 0.38
SSR4-208ENST00000471880 KAT14Q9H8E8 782 aa17.4■□□□□ 0.38
SSR4-208ENST00000471880 CNNM2Q9H8M5 875 aa17.4■□□□□ 0.38
SSR4-208ENST00000471880 SLC38A10Q9HBR0 1119 aa17.4■□□□□ 0.38
SSR4-208ENST00000471880 TCP11L1Q9NUJ3 509 aa17.4■□□□□ 0.38
SSR4-208ENST00000471880 RIPK3Q9Y572 518 aa17.4■□□□□ 0.38
SSR4-208ENST00000471880 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
SSR4-208ENST00000471880 SGSM2O43147 1006 aa17.39■□□□□ 0.37
SSR4-208ENST00000471880 HOXC6P09630 235 aa17.39■□□□□ 0.37
SSR4-208ENST00000471880 ALAS1P13196 640 aa17.39■□□□□ 0.37
SSR4-208ENST00000471880 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.37
SSR4-208ENST00000471880 RALYLQ86SE5 291 aaKnown RBP17.39■□□□□ 0.37
SSR4-208ENST00000471880 ABRAQ8N0Z2 381 aa17.39■□□□□ 0.37
SSR4-208ENST00000471880 TTC14Q96N46 770 aa17.39■□□□□ 0.37
SSR4-208ENST00000471880 CRISPLD2Q9H0B8 497 aa17.39■□□□□ 0.37
SSR4-208ENST00000471880 PRR12Q9ULL5 1215 aa17.39■□□□□ 0.37
SSR4-208ENST00000471880 IGHA2P01877 340 aa17.38■□□□□ 0.37
SSR4-208ENST00000471880 CENPBP07199 599 aaPredicted RBP17.38■□□□□ 0.37
SSR4-208ENST00000471880 FDX1P10109 184 aa17.38■□□□□ 0.37
SSR4-208ENST00000471880 MNX1P50219 401 aaPredicted RBP17.38■□□□□ 0.37
SSR4-208ENST00000471880 PRPF38BQ5VTL8 546 aaKnown RBP17.38■□□□□ 0.37
SSR4-208ENST00000471880 TTBK2Q6IQ55 1244 aa17.38■□□□□ 0.37
SSR4-208ENST00000471880 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
SSR4-208ENST00000471880 MAML3Q96JK9 1138 aa17.38■□□□□ 0.37
SSR4-208ENST00000471880 AGBL1Q96MI9 1066 aa17.38■□□□□ 0.37
SSR4-208ENST00000471880 ZSCAN10Q96SZ4 725 aaPredicted RBP17.38■□□□□ 0.37
SSR4-208ENST00000471880 HTATIP2Q9BUP3 242 aa17.38■□□□□ 0.37
SSR4-208ENST00000471880 ZSWIM5Q9P217 1185 aa17.38■□□□□ 0.37
SSR4-208ENST00000471880 DHX16O60231 1041 aaKnown RBP17.37■□□□□ 0.37
SSR4-208ENST00000471880 GOLGA8HP0CJ92 632 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 OAZ1P54368 228 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 PRAMEF19Q5SWL8 479 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 SYDE2Q5VT97 1194 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 ANO1Q5XXA6 986 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 OLFML2BQ68BL8 750 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 CASC1Q6TDU7 716 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 PNMA1Q8ND90 353 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 DIS3LQ8TF46 1054 aaKnown RBP17.37■□□□□ 0.37
SSR4-208ENST00000471880 ANO2Q9NQ90 1003 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 RNF146Q9NTX7 359 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms