RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 MCMDC2Q4G0Z9 681 aa22.38■■□□□ 1.17
COMMD1-207ENST00000471704 TICAM2Q86XR7 235 aa22.38■■□□□ 1.17
COMMD1-207ENST00000471704 SENP6Q9GZR1 1112 aaPredicted RBP22.38■■□□□ 1.17
COMMD1-207ENST00000471704 ZNF287Q9HBT7 754 aa22.38■■□□□ 1.17
COMMD1-207ENST00000471704 ANAPC4Q9UJX5 808 aa22.38■■□□□ 1.17
COMMD1-207ENST00000471704 PDE4AP27815 886 aa22.37■■□□□ 1.17
COMMD1-207ENST00000471704 PDE4BQ07343 736 aa22.37■■□□□ 1.17
COMMD1-207ENST00000471704 ALX1Q15699 326 aa22.37■■□□□ 1.17
COMMD1-207ENST00000471704 PRAMEF19Q5SWL8 479 aa22.37■■□□□ 1.17
COMMD1-207ENST00000471704 LRRC47Q8N1G4 583 aaKnown RBP22.37■■□□□ 1.17
COMMD1-207ENST00000471704 MMP19Q99542 508 aa22.37■■□□□ 1.17
COMMD1-207ENST00000471704 SLF1Q9BQI6 1058 aa22.37■■□□□ 1.17
COMMD1-207ENST00000471704 DIS3Q9Y2L1 958 aaKnown RBP22.37■■□□□ 1.17
COMMD1-207ENST00000471704 TSPY3P0CV98 308 aa22.36■■□□□ 1.17
COMMD1-207ENST00000471704 TSPY8P0CW00 308 aa22.36■■□□□ 1.17
COMMD1-207ENST00000471704 HSPD1P10809 573 aaKnown RBP22.36■■□□□ 1.17
COMMD1-207ENST00000471704 SDSP20132 328 aa22.36■■□□□ 1.17
COMMD1-207ENST00000471704 COPB2P35606 906 aa22.36■■□□□ 1.17
COMMD1-207ENST00000471704 TFAP4Q01664 338 aa22.36■■□□□ 1.17
COMMD1-207ENST00000471704 ZNF792Q3KQV3 632 aa22.36■■□□□ 1.17
COMMD1-207ENST00000471704 ARRDC4Q8NCT1 418 aa22.36■■□□□ 1.17
COMMD1-207ENST00000471704 NRBP1Q9UHY1 535 aa22.36■■□□□ 1.17
COMMD1-207ENST00000471704 SYNPO2Q9UMS6 1093 aa22.36■■□□□ 1.17
COMMD1-207ENST00000471704 TTLL1O95922 423 aa22.35■■□□□ 1.17
COMMD1-207ENST00000471704 FGAP02671 866 aa22.35■■□□□ 1.17
COMMD1-207ENST00000471704 PGK2P07205 417 aa22.35■■□□□ 1.17
COMMD1-207ENST00000471704 PRPF38AQ8NAV1 312 aaKnown RBP22.35■■□□□ 1.17
COMMD1-207ENST00000471704 IL17RBQ9NRM6 502 aa22.35■■□□□ 1.17
COMMD1-207ENST00000471704 CCDC171Q6TFL3 1326 aa22.34■■□□□ 1.17
COMMD1-207ENST00000471704 ATP2A1O14983 1001 aa22.34■■□□□ 1.17
COMMD1-207ENST00000471704 SLC3A2P08195 630 aaKnown RBP22.34■■□□□ 1.17
COMMD1-207ENST00000471704 FGRP09769 529 aa22.34■■□□□ 1.17
COMMD1-207ENST00000471704 KCTD2Q14681 263 aa22.34■■□□□ 1.17
COMMD1-207ENST00000471704 GJC2Q5T442 439 aaPredicted RBP22.34■■□□□ 1.17
COMMD1-207ENST00000471704 ANO1Q5XXA6 986 aa22.34■■□□□ 1.17
COMMD1-207ENST00000471704 LRCH3Q96II8 777 aa22.34■■□□□ 1.17
COMMD1-207ENST00000471704 TINF2Q9BSI4 451 aa22.34■■□□□ 1.17
COMMD1-207ENST00000471704 TEX13BQ9BXU2 312 aa22.34■■□□□ 1.17
COMMD1-207ENST00000471704 ZMYM6O95789 1325 aa22.33■■□□□ 1.17
COMMD1-207ENST00000471704 NMT2O60551 498 aa22.33■■□□□ 1.17
COMMD1-207ENST00000471704 GMCL1P1Q8NEA9 526 aa22.33■■□□□ 1.17
COMMD1-207ENST00000471704 RIPK3Q9Y572 518 aa22.33■■□□□ 1.17
COMMD1-207ENST00000471704 LAMA2P24043 3122 aaKnown RBP22.33■■□□□ 1.17
COMMD1-207ENST00000471704 LRIT3Q3SXY7 679 aa22.32■■□□□ 1.16
COMMD1-207ENST00000471704 RASGRP2Q7LDG7 609 aa22.32■■□□□ 1.16
COMMD1-207ENST00000471704 TDHQ8IZJ6 230 aa22.32■■□□□ 1.16
COMMD1-207ENST00000471704 COL6A3P12111 3177 aa22.31■■□□□ 1.16
COMMD1-207ENST00000471704 DNAJC25-GNG10A0A024R161 153 aa22.31■■□□□ 1.16
COMMD1-207ENST00000471704 ORC4O43929 436 aa22.31■■□□□ 1.16
COMMD1-207ENST00000471704 NOVP48745 357 aa22.31■■□□□ 1.16
COMMD1-207ENST00000471704 ATN1P54259 1190 aaPredicted RBP22.31■■□□□ 1.16
COMMD1-207ENST00000471704 LRRC41Q15345 812 aa22.31■■□□□ 1.16
COMMD1-207ENST00000471704 SNRNP48Q6IEG0 339 aaKnown RBP22.31■■□□□ 1.16
COMMD1-207ENST00000471704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.31■■□□□ 1.16
COMMD1-207ENST00000471704 UBE2OQ9C0C9 1292 aaKnown RBP22.31■■□□□ 1.16
COMMD1-207ENST00000471704 SLC38A10Q9HBR0 1119 aa22.31■■□□□ 1.16
COMMD1-207ENST00000471704 FEM1BQ9UK73 627 aa22.31■■□□□ 1.16
COMMD1-207ENST00000471704 TSPY2A6NKD2 308 aa22.3■■□□□ 1.16
COMMD1-207ENST00000471704 GSPT1P15170 499 aaKnown RBP22.3■■□□□ 1.16
COMMD1-207ENST00000471704 TAL1P17542 331 aaPredicted RBP22.3■■□□□ 1.16
COMMD1-207ENST00000471704 RTP1P59025 263 aa22.3■■□□□ 1.16
COMMD1-207ENST00000471704 SNX17Q15036 470 aa22.3■■□□□ 1.16
COMMD1-207ENST00000471704 SLFN13Q68D06 897 aa22.3■■□□□ 1.16
COMMD1-207ENST00000471704 GPR153Q6NV75 609 aa22.3■■□□□ 1.16
COMMD1-207ENST00000471704 SLC39A5Q6ZMH5 540 aa22.3■■□□□ 1.16
COMMD1-207ENST00000471704 KBTBD13C9JR72 458 aa22.29■■□□□ 1.16
COMMD1-207ENST00000471704 ZBED4O75132 1171 aa22.29■■□□□ 1.16
COMMD1-207ENST00000471704 ZNF865P0CJ78 1059 aaPredicted RBP22.29■■□□□ 1.16
COMMD1-207ENST00000471704 HAND2P61296 217 aa22.29■■□□□ 1.16
COMMD1-207ENST00000471704 MDM2Q00987 491 aaPredicted RBP22.29■■□□□ 1.16
COMMD1-207ENST00000471704 CWC27Q6UX04 472 aaKnown RBP22.29■■□□□ 1.16
COMMD1-207ENST00000471704 MSL3Q8N5Y2 521 aaKnown RBP22.29■■□□□ 1.16
COMMD1-207ENST00000471704 IL25Q9H293 177 aa22.29■■□□□ 1.16
COMMD1-207ENST00000471704 RANBP6O60518 1105 aaKnown RBP22.28■■□□□ 1.16
COMMD1-207ENST00000471704 BMP3P12645 472 aa22.28■■□□□ 1.16
COMMD1-207ENST00000471704 MAMDC4Q6UXC1 1216 aa22.28■■□□□ 1.16
COMMD1-207ENST00000471704 TBC1D10CQ8IV04 446 aa22.28■■□□□ 1.16
COMMD1-207ENST00000471704 KIFC2Q96AC6 838 aa22.28■■□□□ 1.16
COMMD1-207ENST00000471704 CHMP4CQ96CF2 233 aa22.28■■□□□ 1.16
COMMD1-207ENST00000471704 LTBP2Q14767 1821 aa22.27■■□□□ 1.16
COMMD1-207ENST00000471704 RARBP10826 455 aa22.27■■□□□ 1.16
COMMD1-207ENST00000471704 ADCYAP1R1P41586 468 aa22.27■■□□□ 1.16
COMMD1-207ENST00000471704 OAZ1P54368 228 aa22.27■■□□□ 1.16
COMMD1-207ENST00000471704 C1orf53Q5VUE5 145 aa22.27■■□□□ 1.16
COMMD1-207ENST00000471704 CPXCR1Q8N123 301 aa22.27■■□□□ 1.16
COMMD1-207ENST00000471704 RAVER2Q9HCJ3 691 aaKnown RBP22.27■■□□□ 1.16
COMMD1-207ENST00000471704 STX8Q9UNK0 236 aa22.27■■□□□ 1.16
COMMD1-207ENST00000471704 PHF24Q9UPV7 400 aa22.27■■□□□ 1.16
COMMD1-207ENST00000471704 LCTP09848 1927 aa22.26■■□□□ 1.15
COMMD1-207ENST00000471704 SNAI1O95863 264 aaPredicted RBP22.26■■□□□ 1.15
COMMD1-207ENST00000471704 TTC22Q5TAA0 569 aa22.26■■□□□ 1.15
COMMD1-207ENST00000471704 ZNF467Q7Z7K2 595 aaPredicted RBP22.26■■□□□ 1.15
COMMD1-207ENST00000471704 GMCL1Q96IK5 515 aa22.26■■□□□ 1.15
COMMD1-207ENST00000471704 XPNPEP3Q9NQH7 507 aa22.26■■□□□ 1.15
COMMD1-207ENST00000471704 MCM3APO60318 1980 aa22.26■■□□□ 1.15
COMMD1-207ENST00000471704 SYNGAP1Q96PV0 1343 aa22.26■■□□□ 1.15
COMMD1-207ENST00000471704 TMEM232C9JQI7 657 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 FDX1P10109 184 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 MCCP23508 829 aa22.25■■□□□ 1.15
COMMD1-207ENST00000471704 RRP12Q5JTH9 1297 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms