RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TFIP11Q9UBB9 837 aaKnown RBP20.19■□□□□ 0.82
HSPG2-208ENST00000471322 CENPFP49454 3210 aa20.19■□□□□ 0.82
HSPG2-208ENST00000471322 ATAD5Q96QE3 1844 aa20.18■□□□□ 0.82
HSPG2-208ENST00000471322 GOLGA6L4A6NEF3 574 aa20.18■□□□□ 0.82
HSPG2-208ENST00000471322 USP17L5A8MUK1 530 aa20.18■□□□□ 0.82
HSPG2-208ENST00000471322 NEDD1Q8NHV4 660 aa20.18■□□□□ 0.82
HSPG2-208ENST00000471322 CETPP11597 493 aa20.17■□□□□ 0.82
HSPG2-208ENST00000471322 LBX1P52954 281 aa20.17■□□□□ 0.82
HSPG2-208ENST00000471322 KRT40Q6A162 431 aa20.17■□□□□ 0.82
HSPG2-208ENST00000471322 RCSD1Q6JBY9 416 aa20.17■□□□□ 0.82
HSPG2-208ENST00000471322 REM2Q8IYK8 340 aaPredicted RBP20.17■□□□□ 0.82
HSPG2-208ENST00000471322 FAM43AQ8N2R8 423 aa20.17■□□□□ 0.82
HSPG2-208ENST00000471322 SWAP70Q9UH65 585 aa20.17■□□□□ 0.82
HSPG2-208ENST00000471322 RCOR1Q9UKL0 485 aa20.17■□□□□ 0.82
HSPG2-208ENST00000471322 KCNH4Q9UQ05 1017 aa20.17■□□□□ 0.82
HSPG2-208ENST00000471322 BTBD19C9JJ37 291 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 PRPF3O43395 683 aaKnown RBP20.16■□□□□ 0.82
HSPG2-208ENST00000471322 NMT2O60551 498 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 LETM1O95202 739 aaPredicted RBP20.16■□□□□ 0.82
HSPG2-208ENST00000471322 AKR1B1P15121 316 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 XBP1P17861 261 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 GNAQP50148 359 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 INHBEP58166 350 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 SAFBQ15424 915 aaKnown RBP eCLIP20.16■□□□□ 0.82
HSPG2-208ENST00000471322 GADL1Q6ZQY3 521 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 CLEC10AQ8IUN9 316 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 ZNF280CQ8ND82 737 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 R3HDMLQ9H3Y0 253 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 IL17RBQ9NRM6 502 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
HSPG2-208ENST00000471322 MTMR2Q13614 643 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 SEPT2Q15019 361 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 OTUD7BQ6GQQ9 843 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 TMTC3Q6ZXV5 915 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 CABP5Q9NP86 173 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 TMEM63CQ9P1W3 806 aa20.16■□□□□ 0.82
HSPG2-208ENST00000471322 RBM27Q9P2N5 1060 aaKnown RBP20.16■□□□□ 0.82
HSPG2-208ENST00000471322 PHIPQ8WWQ0 1821 aa20.15■□□□□ 0.82
HSPG2-208ENST00000471322 CXCL11O14625 94 aa20.15■□□□□ 0.82
HSPG2-208ENST00000471322 HSPA8P11142 646 aaKnown RBP20.15■□□□□ 0.82
HSPG2-208ENST00000471322 GUCY1A2P33402 732 aa20.15■□□□□ 0.82
HSPG2-208ENST00000471322 HMGCS2P54868 508 aa20.15■□□□□ 0.82
HSPG2-208ENST00000471322 MOGSQ13724 837 aa20.15■□□□□ 0.82
HSPG2-208ENST00000471322 GNL2Q13823 731 aaKnown RBP20.15■□□□□ 0.82
HSPG2-208ENST00000471322 ZYXQ15942 572 aaKnown RBP20.15■□□□□ 0.82
HSPG2-208ENST00000471322 RTEL1Q9NZ71 1219 aa20.15■□□□□ 0.82
HSPG2-208ENST00000471322 A0A0G2JLL6 359 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-208ENST00000471322 CTCFP49711 727 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-208ENST00000471322 MRE11P49959 708 aa20.14■□□□□ 0.81
HSPG2-208ENST00000471322 FUT2Q10981 343 aa20.14■□□□□ 0.81
HSPG2-208ENST00000471322 CCDC183Q5T5S1 534 aa20.14■□□□□ 0.81
HSPG2-208ENST00000471322 PRRT2Q7Z6L0 340 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-208ENST00000471322 PNMA1Q8ND90 353 aa20.14■□□□□ 0.81
HSPG2-208ENST00000471322 AIFM3Q96NN9 605 aa20.14■□□□□ 0.81
HSPG2-208ENST00000471322 CA12O43570 354 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 U2AF2P26368 475 aaKnown RBP eCLIP20.13■□□□□ 0.81
HSPG2-208ENST00000471322 MYSM1Q5VVJ2 828 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 ACER1Q8TDN7 264 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 AS3MTQ9HBK9 375 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 CRHR2Q13324 411 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 PPP4R3BQ5MIZ7 849 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 CCDC82Q8N4S0 544 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 USP28Q96RU2 1077 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 LZTS2Q9BRK4 669 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 POLR3EQ9NVU0 708 aa20.13■□□□□ 0.81
HSPG2-208ENST00000471322 PDHXO00330 501 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 YEATS4O95619 227 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 MMP1P03956 469 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 NOVP48745 357 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 GRM4Q14833 912 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 TAF1CQ15572 869 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-208ENST00000471322 TREML2Q5T2D2 321 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 GPAT2Q6NUI2 795 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 FEZ1Q99689 392 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 WDR18Q9BV38 432 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 FOXP1Q9H334 677 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-208ENST00000471322 GJB4Q9NTQ9 266 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 SAGE1Q9NXZ1 904 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 STX8Q9UNK0 236 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 TCHHQ07283 1943 aa20.12■□□□□ 0.81
HSPG2-208ENST00000471322 MYH8P13535 1937 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 USP17L10C9JJH3 530 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 PLEKHA8P1O95397 391 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 TOP1P11387 765 aaKnown RBP20.11■□□□□ 0.81
HSPG2-208ENST00000471322 BACE1P56817 501 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 ATP2B2Q01814 1243 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 TMEM179Q6ZVK1 233 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 CMTR1Q8N1G2 835 aaKnown RBP20.11■□□□□ 0.81
HSPG2-208ENST00000471322 KCNG4Q8TDN1 519 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 TMEM47Q9BQJ4 181 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.11■□□□□ 0.81
HSPG2-208ENST00000471322 V9GY48 417 aaPredicted RBP20.11■□□□□ 0.81
HSPG2-208ENST00000471322 PLIN4Q96Q06 1357 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 HTTP42858 3142 aa20.11■□□□□ 0.81
HSPG2-208ENST00000471322 ALDH1A1P00352 501 aa20.1■□□□□ 0.81
HSPG2-208ENST00000471322 LRSAM1Q6UWE0 723 aa20.1■□□□□ 0.81
HSPG2-208ENST00000471322 FASTKD5Q7L8L6 764 aaKnown RBP20.1■□□□□ 0.81
HSPG2-208ENST00000471322 CCDC17Q96LX7 622 aa20.1■□□□□ 0.81
HSPG2-208ENST00000471322 GINM1Q9NU53 330 aa20.1■□□□□ 0.81
HSPG2-208ENST00000471322 A0A1W2PRG0 241 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms