RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 NUP88Q99567 741 aaPredicted RBP13.71□□□□□ -0.21
HLA-C-206ENST00000470363 MKNK2Q9HBH9 465 aa13.71□□□□□ -0.21
HLA-C-206ENST00000470363 SLC5A4Q9NY91 659 aa13.71□□□□□ -0.21
HLA-C-206ENST00000470363 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.21
HLA-C-206ENST00000470363 SYNPO2Q9UMS6 1093 aa13.71□□□□□ -0.21
HLA-C-206ENST00000470363 RIPK3Q9Y572 518 aa13.71□□□□□ -0.21
HLA-C-206ENST00000470363 FRMPD3Q5JV73 1810 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 DNAJC25-GNG10A0A024R161 153 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 ZNF865P0CJ78 1059 aaPredicted RBP13.7□□□□□ -0.22
HLA-C-206ENST00000470363 TAL1P17542 331 aaPredicted RBP13.7□□□□□ -0.22
HLA-C-206ENST00000470363 LRRC41Q15345 812 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 C1orf53Q5VUE5 145 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 ANO1Q5XXA6 986 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 SLC39A5Q6ZMH5 540 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 CEP95Q96GE4 821 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 MMP19Q99542 508 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 SLF1Q9BQI6 1058 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 TINF2Q9BSI4 451 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 CLIP2Q9UDT6 1046 aa13.7□□□□□ -0.22
HLA-C-206ENST00000470363 PRDM1O75626 825 aa13.69□□□□□ -0.22
HLA-C-206ENST00000470363 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
HLA-C-206ENST00000470363 NMIQ13287 307 aaPredicted RBP13.69□□□□□ -0.22
HLA-C-206ENST00000470363 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
HLA-C-206ENST00000470363 CWC27Q6UX04 472 aaKnown RBP13.69□□□□□ -0.22
HLA-C-206ENST00000470363 STK11IPQ8N1F8 1099 aa13.69□□□□□ -0.22
HLA-C-206ENST00000470363 PRPF38AQ8NAV1 312 aaKnown RBP13.69□□□□□ -0.22
HLA-C-206ENST00000470363 NEDD1Q8NHV4 660 aa13.69□□□□□ -0.22
HLA-C-206ENST00000470363 FAM227BQ96M60 508 aa13.69□□□□□ -0.22
HLA-C-206ENST00000470363 UBE2OQ9C0C9 1292 aaKnown RBP13.69□□□□□ -0.22
HLA-C-206ENST00000470363 IL25Q9H293 177 aa13.69□□□□□ -0.22
HLA-C-206ENST00000470363 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
HLA-C-206ENST00000470363 PLIN4Q96Q06 1357 aa13.69□□□□□ -0.22
HLA-C-206ENST00000470363 MYH8P13535 1937 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 SNAI1O95863 264 aaPredicted RBP13.68□□□□□ -0.22
HLA-C-206ENST00000470363 COPB2P35606 906 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 RTP1P59025 263 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 MDM2Q00987 491 aaPredicted RBP13.68□□□□□ -0.22
HLA-C-206ENST00000470363 FAM47AQ5JRC9 791 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 MAMDC4Q6UXC1 1216 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 ZNF444Q8N0Y2 327 aaPredicted RBP13.68□□□□□ -0.22
HLA-C-206ENST00000470363 GMCL1P1Q8NEA9 526 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 FGD4Q96M96 766 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 TEX13BQ9BXU2 312 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 SLC38A10Q9HBR0 1119 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 DIAPH3Q9NSV4 1193 aa13.68□□□□□ -0.22
HLA-C-206ENST00000470363 COL11A1P12107 1806 aaPredicted RBP13.67□□□□□ -0.22
HLA-C-206ENST00000470363 A0A0D9SFI3 127 aa13.67□□□□□ -0.22
HLA-C-206ENST00000470363 TTLL1O95922 423 aa13.67□□□□□ -0.22
HLA-C-206ENST00000470363 NOVP48745 357 aa13.67□□□□□ -0.22
HLA-C-206ENST00000470363 TDO2P48775 406 aa13.67□□□□□ -0.22
HLA-C-206ENST00000470363 MFAP1P55081 439 aaKnown RBP13.67□□□□□ -0.22
HLA-C-206ENST00000470363 KCTD2Q14681 263 aa13.67□□□□□ -0.22
HLA-C-206ENST00000470363 CASC1Q6TDU7 716 aa13.67□□□□□ -0.22
HLA-C-206ENST00000470363 MSL3Q8N5Y2 521 aaKnown RBP13.67□□□□□ -0.22
HLA-C-206ENST00000470363 ESYT1Q9BSJ8 1104 aa13.67□□□□□ -0.22
HLA-C-206ENST00000470363 ZNF287Q9HBT7 754 aa13.67□□□□□ -0.22
HLA-C-206ENST00000470363 PHF24Q9UPV7 400 aa13.67□□□□□ -0.22
HLA-C-206ENST00000470363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.67□□□□□ -0.22
HLA-C-206ENST00000470363 ZNFX1Q9P2E3 1918 aaKnown RBP13.66□□□□□ -0.22
HLA-C-206ENST00000470363 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 RAD21O60216 631 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 ADAMTS4O75173 837 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 APPP05067 770 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 FGRP09769 529 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 ADCYAP1R1P41586 468 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 PPARAQ07869 468 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 LRRFIP1Q32MZ4 808 aaKnown RBP13.66□□□□□ -0.22
HLA-C-206ENST00000470363 SNRNP48Q6IEG0 339 aaKnown RBP13.66□□□□□ -0.22
HLA-C-206ENST00000470363 CCSAPQ6IQ19 270 aaPredicted RBP13.66□□□□□ -0.22
HLA-C-206ENST00000470363 INCENPQ9NQS7 918 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 IL17RBQ9NRM6 502 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 FEM1BQ9UK73 627 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 SMCHD1A6NHR9 2005 aa13.66□□□□□ -0.22
HLA-C-206ENST00000470363 SYNGAP1Q96PV0 1343 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 TRIM43BA6NCK2 446 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 KBTBD13C9JR72 458 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 PGK1P00558 417 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 OAZ1P54368 228 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 TFAP4Q01664 338 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 TRIM60Q495X7 471 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 CCDC129Q6ZRS4 1044 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 Q7L0L9 218 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 SH3RF1Q7Z6J0 888 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
HLA-C-206ENST00000470363 DEFB123Q8N688 67 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 KLHDC9Q8NEP7 349 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 TRIM43Q96BQ3 446 aaPredicted RBP13.65□□□□□ -0.22
HLA-C-206ENST00000470363 NACAP1Q9BZK3 213 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
HLA-C-206ENST00000470363 XPNPEP3Q9NQH7 507 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 TSHZ2Q9NRE2 1034 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 MTMR10Q9NXD2 777 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 ANAPC4Q9UJX5 808 aa13.65□□□□□ -0.22
HLA-C-206ENST00000470363 UNC80Q8N2C7 3258 aa13.65□□□□□ -0.23
HLA-C-206ENST00000470363 ZNF536O15090 1300 aa13.64□□□□□ -0.23
HLA-C-206ENST00000470363 EYSQ5T1H1 3165 aa13.64□□□□□ -0.23
HLA-C-206ENST00000470363 HIP1O00291 1037 aa13.64□□□□□ -0.23
HLA-C-206ENST00000470363 PLA2G6O60733 806 aa13.64□□□□□ -0.23
HLA-C-206ENST00000470363 ZBED4O75132 1171 aa13.64□□□□□ -0.23
HLA-C-206ENST00000470363 RARBP10826 455 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms