RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 USP48Q86UV5 1035 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 PHTF2Q8N3S3 785 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 TEKT1Q969V4 418 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 CSRNP1Q96S65 589 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 KIF2CQ99661 725 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 RIOK1Q9BRS2 568 aaKnown RBP7.84□□□□□ -1.15
VAMP3-202ENST00000470357 RNF41Q9H4P4 317 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-202ENST00000470357 ARMT1Q9H993 441 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 ZNF408Q9H9D4 720 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 CNOT7Q9UIV1 285 aaKnown RBP7.84□□□□□ -1.15
VAMP3-202ENST00000470357 HDAC9Q9UKV0 1011 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 TTF2Q9UNY4 1162 aaKnown RBP7.84□□□□□ -1.15
VAMP3-202ENST00000470357 CYP46A1Q9Y6A2 500 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 MYH8P13535 1937 aa7.84□□□□□ -1.16
VAMP3-202ENST00000470357 POM121CA8CG34 1229 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 TRPA1O75762 1119 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 RAD17O75943 681 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 EGFRP00533 1210 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 FGAP02671 866 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 CHGBP05060 677 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 RPS12P25398 132 aaKnown RBP7.83□□□□□ -1.16
VAMP3-202ENST00000470357 NEK4P51957 841 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 ANKRD1Q15327 319 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 SLFNL1Q499Z3 407 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 VPS53Q5VIR6 699 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 BLOC1S2Q6QNY1 142 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 IFNL3Q8IZI9 196 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 LCORLQ8N3X6 602 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 OGFOD1Q8N543 542 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 MIGA1Q8NAN2 632 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 AGBL3Q8NEM8 1001 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 CNNM2Q9H8M5 875 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 ZNF395Q9H8N7 513 aaPredicted RBP7.83□□□□□ -1.16
VAMP3-202ENST00000470357 AATFQ9NY61 560 aaKnown RBP eCLIP7.83□□□□□ -1.16
VAMP3-202ENST00000470357 ARPP21Q9UBL0 812 aaPredicted RBP7.83□□□□□ -1.16
VAMP3-202ENST00000470357 SERPINA10Q9UK55 444 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 JAG2Q9Y219 1238 aa7.83□□□□□ -1.16
VAMP3-202ENST00000470357 SZT2Q5T011 3432 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 WDR19Q8NEZ3 1342 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 SOBPA7XYQ1 873 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 GSG1L2A8MUP6 293 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 ADH1AP07327 375 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 CYP21A2P08686 494 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 VIL1P09327 827 aaKnown RBP7.82□□□□□ -1.16
VAMP3-202ENST00000470357 CASTP20810 708 aaKnown RBP7.82□□□□□ -1.16
VAMP3-202ENST00000470357 SOX11P35716 441 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 BTDP43251 543 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 USP5P45974 858 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 SCTRP47872 440 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 SBK1Q52WX2 424 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 RUFY3Q7L099 469 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 CTU1Q7Z7A3 348 aaKnown RBP7.82□□□□□ -1.16
VAMP3-202ENST00000470357 RALYLQ86SE5 291 aaKnown RBP7.82□□□□□ -1.16
VAMP3-202ENST00000470357 ADGRA1Q86SQ6 560 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 RNF135Q8IUD6 432 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 CERS5Q8N5B7 392 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 KDF1Q8NAX2 398 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-202ENST00000470357 NCOA7Q8NI08 942 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 ZNF384Q8TF68 577 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 ZNF775Q96BV0 537 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-202ENST00000470357 CHMP4CQ96CF2 233 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 ZDHHC15Q96MV8 337 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 JAKMIP1Q96N16 626 aaKnown RBP7.82□□□□□ -1.16
VAMP3-202ENST00000470357 NEK1Q96PY6 1258 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 KRT23Q9C075 422 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 ALDH8A1Q9H2A2 487 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-202ENST00000470357 ALG2Q9H553 416 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 ZNF287Q9HBT7 754 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 ANAPC4Q9UJX5 808 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 PALD1Q9ULE6 856 aa7.82□□□□□ -1.16
VAMP3-202ENST00000470357 BRCA2P51587 3418 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 K7ELQ4 463 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-202ENST00000470357 PTGIRP43119 386 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 CRKP46108 304 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 ERVK-9P63128 1117 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 DYNLL1P63167 89 aaKnown RBP7.81□□□□□ -1.16
VAMP3-202ENST00000470357 KIAA0825Q8IV33 1275 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 TEX11Q8IYF3 940 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 DPF2Q92785 391 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 ZSCAN31Q96LW9 406 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-202ENST00000470357 MTA3Q9BTC8 594 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 GBA2Q9HCG7 927 aaPredicted RBP7.81□□□□□ -1.16
VAMP3-202ENST00000470357 PDRG1Q9NUG6 133 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 TMOD2Q9NZR1 351 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 DAGLAQ9Y4D2 1042 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 HTTP42858 3142 aa7.81□□□□□ -1.16
VAMP3-202ENST00000470357 DDX60LQ5H9U9 1706 aaKnown RBP7.81□□□□□ -1.16
VAMP3-202ENST00000470357 FIGNL2A6NMB9 653 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 ADM5C9JUS6 153 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 E7EWF7 191 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 F8W031 263 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 H7C1D1 291 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 PSMD14O00487 310 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 FOXP2O15409 715 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 SPINT1O43278 529 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 MYO1BO43795 1136 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 HSP90AA1P07900 732 aaKnown RBP7.8□□□□□ -1.16
VAMP3-202ENST00000470357 RPS6KB1P23443 525 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 MCM5P33992 734 aa7.8□□□□□ -1.16
VAMP3-202ENST00000470357 ZNF157P51786 506 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms