RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 TACC3Q9Y6A5 838 aa19.38■□□□□ 0.69
COL9A3-208ENST00000469802 LRRC37A2A6NM11 1700 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 LAMA3Q16787 3333 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 PGK2P07205 417 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 FGRP09769 529 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 KCTD2Q14681 263 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 ALX1Q15699 326 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 SNRNP48Q6IEG0 339 aaKnown RBP19.37■□□□□ 0.69
COL9A3-208ENST00000469802 FAM227BQ96M60 508 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 SLC38A10Q9HBR0 1119 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 NRBP1Q9UHY1 535 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 ZMYND8Q9ULU4 1186 aaPredicted RBP19.37■□□□□ 0.69
COL9A3-208ENST00000469802 RIPK3Q9Y572 518 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 LCTP09848 1927 aa19.37■□□□□ 0.69
COL9A3-208ENST00000469802 NOVP48745 357 aa19.36■□□□□ 0.69
COL9A3-208ENST00000469802 CTDSPL2Q05D32 466 aa19.36■□□□□ 0.69
COL9A3-208ENST00000469802 RWDD1Q9H446 243 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-208ENST00000469802 FEM1BQ9UK73 627 aa19.36■□□□□ 0.69
COL9A3-208ENST00000469802 DNAJC25-GNG10A0A024R161 153 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 ORC4O43929 436 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 IGHDP01880 384 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 BMP8BP34820 402 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 MCMDC2Q4G0Z9 681 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 SLFN13Q68D06 897 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 EXOC6Q8TAG9 804 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 GMCL1Q96IK5 515 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 TINF2Q9BSI4 451 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 OSBPL3Q9H4L5 887 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 IL17RBQ9NRM6 502 aa19.35■□□□□ 0.69
COL9A3-208ENST00000469802 BMP3P12645 472 aa19.34■□□□□ 0.69
COL9A3-208ENST00000469802 OAZ1P54368 228 aa19.34■□□□□ 0.69
COL9A3-208ENST00000469802 NUCB1Q02818 461 aa19.34■□□□□ 0.69
COL9A3-208ENST00000469802 NMIQ13287 307 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-208ENST00000469802 PPP4R3BQ5MIZ7 849 aa19.34■□□□□ 0.69
COL9A3-208ENST00000469802 PRAMEF19Q5SWL8 479 aa19.34■□□□□ 0.69
COL9A3-208ENST00000469802 ZNF589Q86UQ0 364 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-208ENST00000469802 CHD1LQ86WJ1 897 aa19.34■□□□□ 0.69
COL9A3-208ENST00000469802 PLEKHM2Q8IWE5 1019 aa19.34■□□□□ 0.69
COL9A3-208ENST00000469802 KIFC2Q96AC6 838 aa19.34■□□□□ 0.69
COL9A3-208ENST00000469802 INCENPQ9NQS7 918 aa19.34■□□□□ 0.69
COL9A3-208ENST00000469802 CCDC171Q6TFL3 1326 aa19.33■□□□□ 0.69
COL9A3-208ENST00000469802 TSPY2A6NKD2 308 aa19.33■□□□□ 0.68
COL9A3-208ENST00000469802 ZBED4O75132 1171 aa19.33■□□□□ 0.68
COL9A3-208ENST00000469802 SYN1P17600 705 aa19.33■□□□□ 0.68
COL9A3-208ENST00000469802 ANO1Q5XXA6 986 aa19.33■□□□□ 0.68
COL9A3-208ENST00000469802 SENP6Q9GZR1 1112 aaPredicted RBP19.33■□□□□ 0.68
COL9A3-208ENST00000469802 NMT2O60551 498 aa19.32■□□□□ 0.68
COL9A3-208ENST00000469802 PLA2G6O60733 806 aa19.32■□□□□ 0.68
COL9A3-208ENST00000469802 FGAP02671 866 aa19.32■□□□□ 0.68
COL9A3-208ENST00000469802 FDX1P10109 184 aa19.32■□□□□ 0.68
COL9A3-208ENST00000469802 HSPD1P10809 573 aaKnown RBP19.32■□□□□ 0.68
COL9A3-208ENST00000469802 MAGEA10P43363 369 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-208ENST00000469802 STAT2P52630 851 aa19.32■□□□□ 0.68
COL9A3-208ENST00000469802 GJC2Q5T442 439 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-208ENST00000469802 B4GALNT3Q6L9W6 998 aa19.32■□□□□ 0.68
COL9A3-208ENST00000469802 CPXCR1Q8N123 301 aa19.32■□□□□ 0.68
COL9A3-208ENST00000469802 MSL3Q8N5Y2 521 aaKnown RBP19.32■□□□□ 0.68
COL9A3-208ENST00000469802 ARRDC4Q8NCT1 418 aa19.32■□□□□ 0.68
COL9A3-208ENST00000469802 RAVER2Q9HCJ3 691 aaKnown RBP19.32■□□□□ 0.68
COL9A3-208ENST00000469802 STX8Q9UNK0 236 aa19.32■□□□□ 0.68
COL9A3-208ENST00000469802 SYNGAP1Q96PV0 1343 aa19.31■□□□□ 0.68
COL9A3-208ENST00000469802 TRIM6-TRIM34B2RNG4 842 aa19.31■□□□□ 0.68
COL9A3-208ENST00000469802 TMEM232C9JQI7 657 aa19.31■□□□□ 0.68
COL9A3-208ENST00000469802 ZNF865P0CJ78 1059 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-208ENST00000469802 TAL1P17542 331 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-208ENST00000469802 SLC1A4P43007 532 aa19.31■□□□□ 0.68
COL9A3-208ENST00000469802 MAMDC4Q6UXC1 1216 aa19.31■□□□□ 0.68
COL9A3-208ENST00000469802 RASGRP2Q7LDG7 609 aa19.31■□□□□ 0.68
COL9A3-208ENST00000469802 FAM160B2Q86V87 743 aa19.31■□□□□ 0.68
COL9A3-208ENST00000469802 FGD4Q96M96 766 aa19.31■□□□□ 0.68
COL9A3-208ENST00000469802 ZNF536O15090 1300 aa19.3■□□□□ 0.68
COL9A3-208ENST00000469802 SNX17Q15036 470 aa19.3■□□□□ 0.68
COL9A3-208ENST00000469802 LRRC41Q15345 812 aa19.3■□□□□ 0.68
COL9A3-208ENST00000469802 ZNF467Q7Z7K2 595 aaPredicted RBP19.3■□□□□ 0.68
COL9A3-208ENST00000469802 CHST13Q8NET6 341 aa19.3■□□□□ 0.68
COL9A3-208ENST00000469802 STAG1Q8WVM7 1258 aa19.3■□□□□ 0.68
COL9A3-208ENST00000469802 FBXO40Q9UH90 709 aa19.3■□□□□ 0.68
COL9A3-208ENST00000469802 KBTBD13C9JR72 458 aa19.29■□□□□ 0.68
COL9A3-208ENST00000469802 SOX1O00570 391 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-208ENST00000469802 RANBP6O60518 1105 aaKnown RBP19.29■□□□□ 0.68
COL9A3-208ENST00000469802 SDSP20132 328 aa19.29■□□□□ 0.68
COL9A3-208ENST00000469802 MCCP23508 829 aa19.29■□□□□ 0.68
COL9A3-208ENST00000469802 CHURC1Q8WUH1 139 aa19.29■□□□□ 0.68
COL9A3-208ENST00000469802 DDX11Q96FC9 970 aa19.29■□□□□ 0.68
COL9A3-208ENST00000469802 CTDP1Q9Y5B0 961 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-208ENST00000469802 SNAI1O95863 264 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-208ENST00000469802 RARBP10826 455 aa19.28■□□□□ 0.68
COL9A3-208ENST00000469802 AKR1A1P14550 325 aa19.28■□□□□ 0.68
COL9A3-208ENST00000469802 ATN1P54259 1190 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-208ENST00000469802 RTP1P59025 263 aa19.28■□□□□ 0.68
COL9A3-208ENST00000469802 RCSD1Q6JBY9 416 aa19.28■□□□□ 0.68
COL9A3-208ENST00000469802 KCTD1Q719H9 257 aa19.28■□□□□ 0.68
COL9A3-208ENST00000469802 RILPL2Q969X0 211 aa19.28■□□□□ 0.68
COL9A3-208ENST00000469802 XPNPEP3Q9NQH7 507 aa19.28■□□□□ 0.68
COL9A3-208ENST00000469802 TCP11L1Q9NUJ3 509 aa19.28■□□□□ 0.68
COL9A3-208ENST00000469802 CNPY2Q9Y2B0 182 aa19.28■□□□□ 0.68
COL9A3-208ENST00000469802 PCP11498 1178 aaKnown RBP19.27■□□□□ 0.68
COL9A3-208ENST00000469802 TBC1D10CQ8IV04 446 aa19.27■□□□□ 0.68
COL9A3-208ENST00000469802 PHF24Q9UPV7 400 aa19.27■□□□□ 0.68
COL9A3-208ENST00000469802 ADAMTS4O75173 837 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms