RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 LRFN4Q6PJG9 635 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 EPM2AIP1Q7L775 607 aaPredicted RBP6.2□□□□□ -1.42
SMG5-202ENST00000468993 CPA6Q8N4T0 437 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 GPBAR1Q8TDU6 330 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 SMARCC1Q92922 1105 aaPredicted RBP6.2□□□□□ -1.42
SMG5-202ENST00000468993 BHMTQ93088 406 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 PPP1R14AQ96A00 147 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 ACSBG1Q96GR2 724 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 SCLYQ96I15 445 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 FUBP3Q96I24 572 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMG5-202ENST00000468993 AIFM3Q96NN9 605 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 HAUS7Q99871 368 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 AS3MTQ9HBK9 375 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 DDX21Q9NR30 783 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMG5-202ENST00000468993 MAN1C1Q9NR34 630 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 KLHL3Q9UH77 587 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 PCDHGC4Q9Y5F7 938 aa6.2□□□□□ -1.42
SMG5-202ENST00000468993 DCDC2BA2VCK2 349 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 J3QW42 95 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 FAM163BP0C2L3 166 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 LPOP22079 712 aaPredicted RBP6.19□□□□□ -1.42
SMG5-202ENST00000468993 HALP42357 657 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 KRT85P78386 507 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 INPP5AQ14642 412 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 INAVAQ3KP66 663 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 CEP135Q66GS9 1140 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 ZNF280DQ6N043 979 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 PPFIBP1Q86W92 1011 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 PTPRN2Q92932 1015 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 MAGEB10Q96LZ2 347 aaPredicted RBP6.19□□□□□ -1.42
SMG5-202ENST00000468993 NUP88Q99567 741 aaPredicted RBP6.19□□□□□ -1.42
SMG5-202ENST00000468993 ADAM19Q9H013 955 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 KLHL25Q9H0H3 589 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 KRT82Q9NSB4 513 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 MARK1Q9P0L2 795 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 NRBP1Q9UHY1 535 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 ZBTB21Q9ULJ3 1066 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 PHTF1Q9UMS5 762 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 TEX14Q8IWB6 1497 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 RAD54L2Q9Y4B4 1467 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 FRMPD2Q68DX3 1309 aaPredicted RBP6.19□□□□□ -1.42
SMG5-202ENST00000468993 PRDM2Q13029 1718 aa6.19□□□□□ -1.42
SMG5-202ENST00000468993 YEATS2Q9ULM3 1422 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 TCRBV16S1A1N1A0A5B0 115 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 J3QL48 77 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 M0R2C6 588 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 FZD9O00144 591 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 SLC26A4O43511 780 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 ZNF500O60304 480 aaPredicted RBP6.18□□□□□ -1.42
SMG5-202ENST00000468993 EIF4EBP3O60516 100 aaPredicted RBP6.18□□□□□ -1.42
SMG5-202ENST00000468993 TYRP1P17643 537 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 VCAM1P19320 739 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 POLR2BP30876 1174 aaKnown RBP6.18□□□□□ -1.42
SMG5-202ENST00000468993 GRIA2P42262 883 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 CASP2P42575 452 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 ERVK-21P61565 698 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 HNRNPUQ00839 825 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMG5-202ENST00000468993 TNP2Q05952 138 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 NEUROD1Q13562 356 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 SART3Q15020 963 aaKnown RBP6.18□□□□□ -1.42
SMG5-202ENST00000468993 PCSK7Q16549 785 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 ARHGAP29Q52LW3 1261 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 L1TD1Q5T7N2 865 aaKnown RBP6.18□□□□□ -1.42
SMG5-202ENST00000468993 ZCCHC8Q6NZY4 707 aaKnown RBP6.18□□□□□ -1.42
SMG5-202ENST00000468993 CYFIP1Q7L576 1253 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 MAMDC2Q7Z304 686 aaPredicted RBP6.18□□□□□ -1.42
SMG5-202ENST00000468993 ZNF513Q8N8E2 541 aaPredicted RBP6.18□□□□□ -1.42
SMG5-202ENST00000468993 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMG5-202ENST00000468993 ATXN2LQ8WWM7 1075 aaKnown RBP6.18□□□□□ -1.42
SMG5-202ENST00000468993 ELMO3Q96BJ8 720 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 SLC6A18Q96N87 628 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 NLRC4Q9NPP4 1024 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 KLHL11Q9NVR0 708 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 APEX2Q9UBZ4 518 aa6.18□□□□□ -1.42
SMG5-202ENST00000468993 A0A087WZG4 1122 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 ZBTB42B2RXF5 422 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 CHURC1-FNTBB4DL54 471 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 CCER2I3L3R5 266 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 PMM2O15305 246 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 CBFA2T2O43439 604 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 APPP05067 770 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 ASGR2P07307 311 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 MAPTP10636 758 aaKnown RBP6.17□□□□□ -1.42
SMG5-202ENST00000468993 BMP2P12643 396 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 IARSP41252 1262 aaKnown RBP6.17□□□□□ -1.42
SMG5-202ENST00000468993 SARSP49591 514 aaKnown RBP6.17□□□□□ -1.42
SMG5-202ENST00000468993 IL2P60568 153 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 CHAF1AQ13111 956 aaPredicted RBP6.17□□□□□ -1.42
SMG5-202ENST00000468993 IKBKEQ14164 716 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 PIK3R6Q5UE93 754 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 SPRYD7Q5W111 196 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 CCDC174Q6PII3 467 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 ZNF354CQ86Y25 554 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 BVESQ8NE79 360 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 VPS37AQ8NEZ2 397 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 TRMT2BQ96GJ1 504 aaKnown RBP6.17□□□□□ -1.42
SMG5-202ENST00000468993 WNK4Q96J92 1243 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 TNIP3Q96KP6 325 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 SCLT1Q96NL6 688 aa6.17□□□□□ -1.42
SMG5-202ENST00000468993 CDC5LQ99459 802 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms