RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 HELLSQ9NRZ9 838 aa25.86■■□□□ 1.73
TTC28-204ENST00000468807 FOXP2O15409 715 aa25.85■■□□□ 1.73
TTC28-204ENST00000468807 LRRC26Q2I0M4 334 aa25.85■■□□□ 1.73
TTC28-204ENST00000468807 GMCL1P1Q8NEA9 526 aa25.85■■□□□ 1.73
TTC28-204ENST00000468807 RILPL2Q969X0 211 aa25.85■■□□□ 1.73
TTC28-204ENST00000468807 INCENPQ9NQS7 918 aa25.85■■□□□ 1.73
TTC28-204ENST00000468807 FEM1BQ9UK73 627 aa25.85■■□□□ 1.73
TTC28-204ENST00000468807 STX8Q9UNK0 236 aa25.85■■□□□ 1.73
TTC28-204ENST00000468807 SEPT4O43236 478 aa25.84■■□□□ 1.73
TTC28-204ENST00000468807 BMP3P12645 472 aa25.84■■□□□ 1.73
TTC28-204ENST00000468807 GJC2Q5T442 439 aaPredicted RBP25.84■■□□□ 1.73
TTC28-204ENST00000468807 EXOC6Q8TAG9 804 aa25.84■■□□□ 1.73
TTC28-204ENST00000468807 SYNPO2Q9UMS6 1093 aa25.84■■□□□ 1.73
TTC28-204ENST00000468807 A0A0D9SFI3 127 aa25.83■■□□□ 1.73
TTC28-204ENST00000468807 DNM1LO00429 736 aa25.83■■□□□ 1.73
TTC28-204ENST00000468807 RANBP6O60518 1105 aaKnown RBP25.83■■□□□ 1.73
TTC28-204ENST00000468807 ATN1P54259 1190 aaPredicted RBP25.83■■□□□ 1.73
TTC28-204ENST00000468807 IKQ13123 557 aaPredicted RBP25.83■■□□□ 1.73
TTC28-204ENST00000468807 MCMDC2Q4G0Z9 681 aa25.83■■□□□ 1.73
TTC28-204ENST00000468807 RAVER2Q9HCJ3 691 aaKnown RBP25.83■■□□□ 1.73
TTC28-204ENST00000468807 TOMM22Q9NS69 142 aa25.83■■□□□ 1.73
TTC28-204ENST00000468807 RIPK3Q9Y572 518 aa25.83■■□□□ 1.73
TTC28-204ENST00000468807 SMC5Q8IY18 1101 aa25.82■■□□□ 1.72
TTC28-204ENST00000468807 ARRDC4Q8NCT1 418 aa25.82■■□□□ 1.72
TTC28-204ENST00000468807 DDX11Q96FC9 970 aa25.82■■□□□ 1.72
TTC28-204ENST00000468807 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.82■■□□□ 1.72
TTC28-204ENST00000468807 KBTBD13C9JR72 458 aa25.81■■□□□ 1.72
TTC28-204ENST00000468807 IGHDP01880 384 aa25.81■■□□□ 1.72
TTC28-204ENST00000468807 NMIQ13287 307 aaPredicted RBP25.81■■□□□ 1.72
TTC28-204ENST00000468807 ZNF792Q3KQV3 632 aa25.81■■□□□ 1.72
TTC28-204ENST00000468807 PPP4R3BQ5MIZ7 849 aa25.81■■□□□ 1.72
TTC28-204ENST00000468807 TINF2Q9BSI4 451 aa25.81■■□□□ 1.72
TTC28-204ENST00000468807 SLC38A10Q9HBR0 1119 aa25.81■■□□□ 1.72
TTC28-204ENST00000468807 MTMR7Q9Y216 660 aa25.81■■□□□ 1.72
TTC28-204ENST00000468807 LAMA3Q16787 3333 aa25.8■■□□□ 1.72
TTC28-204ENST00000468807 TMEM232C9JQI7 657 aa25.8■■□□□ 1.72
TTC28-204ENST00000468807 NMT2O60551 498 aa25.8■■□□□ 1.72
TTC28-204ENST00000468807 SLC1A4P43007 532 aa25.8■■□□□ 1.72
TTC28-204ENST00000468807 MAGEA10P43363 369 aaPredicted RBP25.8■■□□□ 1.72
TTC28-204ENST00000468807 RRP12Q5JTH9 1297 aaKnown RBP25.8■■□□□ 1.72
TTC28-204ENST00000468807 CHD1LQ86WJ1 897 aa25.8■■□□□ 1.72
TTC28-204ENST00000468807 DIS3Q9Y2L1 958 aaKnown RBP25.8■■□□□ 1.72
TTC28-204ENST00000468807 MCCP23508 829 aa25.79■■□□□ 1.72
TTC28-204ENST00000468807 STAT2P52630 851 aa25.79■■□□□ 1.72
TTC28-204ENST00000468807 GDF15Q99988 308 aa25.79■■□□□ 1.72
TTC28-204ENST00000468807 HOMER2Q9NSB8 354 aa25.79■■□□□ 1.72
TTC28-204ENST00000468807 ANAPC4Q9UJX5 808 aa25.79■■□□□ 1.72
TTC28-204ENST00000468807 SMCHD1A6NHR9 2005 aa25.79■■□□□ 1.72
TTC28-204ENST00000468807 A0A1W2PPC1 479 aa25.78■■□□□ 1.72
TTC28-204ENST00000468807 ALX1Q15699 326 aa25.78■■□□□ 1.72
TTC28-204ENST00000468807 ZNF589Q86UQ0 364 aaPredicted RBP25.78■■□□□ 1.72
TTC28-204ENST00000468807 ANKRD35Q8N283 1001 aa25.78■■□□□ 1.72
TTC28-204ENST00000468807 IL17RBQ9NRM6 502 aa25.78■■□□□ 1.72
TTC28-204ENST00000468807 CNPY2Q9Y2B0 182 aa25.78■■□□□ 1.72
TTC28-204ENST00000468807 ATP2A1O14983 1001 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 FGAP02671 866 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 HSPD1P10809 573 aaKnown RBP25.77■■□□□ 1.72
TTC28-204ENST00000468807 RARBP10826 455 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 TAL1P17542 331 aaPredicted RBP25.77■■□□□ 1.72
TTC28-204ENST00000468807 NUCB1Q02818 461 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 CHURC1Q8WUH1 139 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 GMCL1Q96IK5 515 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 XPNPEP3Q9NQH7 507 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 NRBP1Q9UHY1 535 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 TACC3Q9Y6A5 838 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 CCDC171Q6TFL3 1326 aa25.77■■□□□ 1.72
TTC28-204ENST00000468807 HAND2P61296 217 aa25.76■■□□□ 1.71
TTC28-204ENST00000468807 KCTD1Q719H9 257 aa25.76■■□□□ 1.71
TTC28-204ENST00000468807 FAM160B2Q86V87 743 aa25.76■■□□□ 1.71
TTC28-204ENST00000468807 PLEKHM2Q8IWE5 1019 aa25.76■■□□□ 1.71
TTC28-204ENST00000468807 STAG1Q8WVM7 1258 aa25.76■■□□□ 1.71
TTC28-204ENST00000468807 UBE2OQ9C0C9 1292 aaKnown RBP25.76■■□□□ 1.71
TTC28-204ENST00000468807 ATP11BQ9Y2G3 1177 aa25.76■■□□□ 1.71
TTC28-204ENST00000468807 ORC4O43929 436 aa25.75■■□□□ 1.71
TTC28-204ENST00000468807 BMP8BP34820 402 aa25.75■■□□□ 1.71
TTC28-204ENST00000468807 OAZ1P54368 228 aa25.75■■□□□ 1.71
TTC28-204ENST00000468807 LRRC41Q15345 812 aa25.75■■□□□ 1.71
TTC28-204ENST00000468807 TICAM2Q86XR7 235 aa25.75■■□□□ 1.71
TTC28-204ENST00000468807 FERMT2Q96AC1 680 aa25.75■■□□□ 1.71
TTC28-204ENST00000468807 FBXO40Q9UH90 709 aa25.75■■□□□ 1.71
TTC28-204ENST00000468807 ZHX1Q9UKY1 873 aaPredicted RBP25.75■■□□□ 1.71
TTC28-204ENST00000468807 FDX1P10109 184 aa25.74■■□□□ 1.71
TTC28-204ENST00000468807 SDSP20132 328 aa25.74■■□□□ 1.71
TTC28-204ENST00000468807 ADCYAP1R1P41586 468 aa25.74■■□□□ 1.71
TTC28-204ENST00000468807 RTP1P59025 263 aa25.74■■□□□ 1.71
TTC28-204ENST00000468807 MDM2Q00987 491 aaPredicted RBP25.74■■□□□ 1.71
TTC28-204ENST00000468807 CCDC96Q2M329 555 aa25.74■■□□□ 1.71
TTC28-204ENST00000468807 RASGRP2Q7LDG7 609 aa25.74■■□□□ 1.71
TTC28-204ENST00000468807 CHST13Q8NET6 341 aa25.74■■□□□ 1.71
TTC28-204ENST00000468807 SUPT16HQ9Y5B9 1047 aaKnown RBP25.74■■□□□ 1.71
TTC28-204ENST00000468807 PGK1P00558 417 aa25.73■■□□□ 1.71
TTC28-204ENST00000468807 ZNF865P0CJ78 1059 aaPredicted RBP25.73■■□□□ 1.71
TTC28-204ENST00000468807 AKR1A1P14550 325 aa25.73■■□□□ 1.71
TTC28-204ENST00000468807 MFAP1P55081 439 aaKnown RBP25.73■■□□□ 1.71
TTC28-204ENST00000468807 SNAP25P60880 206 aa25.73■■□□□ 1.71
TTC28-204ENST00000468807 RCSD1Q6JBY9 416 aa25.73■■□□□ 1.71
TTC28-204ENST00000468807 CCDC174Q6PII3 467 aa25.73■■□□□ 1.71
TTC28-204ENST00000468807 LENG1Q96BZ8 264 aaPredicted RBP25.73■■□□□ 1.71
TTC28-204ENST00000468807 PRKAG2Q9UGJ0 569 aa25.73■■□□□ 1.71
TTC28-204ENST00000468807 SYNGAP1Q96PV0 1343 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms