RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 POTECB2RU33 542 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 PRAMEF18Q5VWM3 479 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 KCTD1Q719H9 257 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 ADGRF4Q8IZF3 695 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 SPATA32Q96LK8 384 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 PIGSQ96S52 555 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 SCAND2PQ9GZW5 306 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-208ENST00000468300 SH3GLB2Q9NR46 395 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 ZNF112Q9UJU3 913 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 FZD1Q9UP38 647 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 RLFQ13129 1914 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 F5H6K3 240 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 H7C1D1 291 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 CEBPZQ03701 1054 aaKnown RBP9.51□□□□□ -0.89
BRCA1-208ENST00000468300 KLRC3Q07444 240 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 CCDC84Q86UT8 332 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-208ENST00000468300 GMCL1Q96IK5 515 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 L3MBTL3Q96JM7 780 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-208ENST00000468300 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-208ENST00000468300 SYNPO2Q9UMS6 1093 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 SCN4AP35499 1836 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 SMCHD1A6NHR9 2005 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 MAFGO15525 162 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 NDUFB10O96000 172 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 SLC16A2P36021 539 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 NUP88Q99567 741 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-208ENST00000468300 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 GGA3Q9NZ52 723 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 TMX2Q9Y320 296 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 EDIL3O43854 480 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 LIG1P18858 919 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 TNNI2P48788 182 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 TNFAIP1Q13829 316 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 AXDND1Q5T1B0 1012 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-208ENST00000468300 DCAF4Q8WV16 495 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 GOLPH3LQ9H4A5 285 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 CFAP45Q9UL16 551 aa9.51□□□□□ -0.89
BRCA1-208ENST00000468300 ANO1Q5XXA6 986 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 SLFN13Q68D06 897 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 CAVIN1Q6NZI2 390 aaKnown RBP9.5□□□□□ -0.89
BRCA1-208ENST00000468300 GAS2L3Q86XJ1 694 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 DAGLBQ8NCG7 672 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 TRIM34Q9BYJ4 488 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 ZMYND12Q9H0C1 365 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 PCDHA7Q9UN72 937 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 ATP2B2Q01814 1243 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 TRIM29Q14134 588 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 SF3A1Q15459 793 aaKnown RBP9.5□□□□□ -0.89
BRCA1-208ENST00000468300 ZSCAN23Q3MJ62 389 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 PCDHA6Q9UN73 950 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 PCDHB6Q9Y5E3 794 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 PCDHA8Q9Y5H6 950 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 PITPNM2Q9BZ72 1349 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 YEATS4O95619 227 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 KRT2P35908 639 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 IRX3P78415 501 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-208ENST00000468300 AKAP17AQ02040 695 aaKnown RBP9.5□□□□□ -0.89
BRCA1-208ENST00000468300 SNW1Q13573 536 aaKnown RBP9.5□□□□□ -0.89
BRCA1-208ENST00000468300 GSE1Q14687 1217 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 SLC39A14Q15043 492 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 GPATCH4Q5T3I0 446 aaKnown RBP9.5□□□□□ -0.89
BRCA1-208ENST00000468300 BTNL9Q6UXG8 535 aa9.5□□□□□ -0.89
BRCA1-208ENST00000468300 ZNF396Q96N95 335 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-208ENST00000468300 ADARB2Q9NS39 739 aaKnown RBP9.5□□□□□ -0.89
BRCA1-208ENST00000468300 PTPRFP10586 1907 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 INPP5BP32019 993 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 DGKZQ13574 1117 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 APOBEC3FQ8IUX4 373 aaKnown RBP9.49□□□□□ -0.89
BRCA1-208ENST00000468300 ENGASEQ8NFI3 743 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 VAT1LQ9HCJ6 419 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 PCDHA4Q9UN74 947 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 FSD2A1L4K1 749 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 MBD3O95983 291 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 RRP36Q96EU6 259 aaKnown RBP9.49□□□□□ -0.89
BRCA1-208ENST00000468300 CABP5Q9NP86 173 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.49□□□□□ -0.89
BRCA1-208ENST00000468300 MRVI1Q9Y6F6 885 aa9.49□□□□□ -0.89
BRCA1-208ENST00000468300 CTNND1O60716 968 aaKnown RBP9.48□□□□□ -0.89
BRCA1-208ENST00000468300 SLC1A4P43007 532 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 HEATR3Q7Z4Q2 680 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 SPICE1Q8N0Z3 855 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 RASGRP4Q8TDF6 673 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 COA7Q96BR5 231 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 PNMA6FA0A0J9YX94 578 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 NR1I2O75469 434 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 CLK2P49760 499 aaKnown RBP9.48□□□□□ -0.89
BRCA1-208ENST00000468300 ZNF445P59923 1031 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 GRIN1Q05586 938 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 HOMER1Q86YM7 354 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 BLIDQ8IZY5 108 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 MORC2Q9Y6X9 1032 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-208ENST00000468300 ZBTB5O15062 677 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 NLRP5P59047 1200 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 CSPP1Q1MSJ5 1256 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 C4orf32Q8N8J7 132 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 ZKSCAN4Q969J2 545 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-208ENST00000468300 KLRG1Q96E93 195 aa9.48□□□□□ -0.89
BRCA1-208ENST00000468300 PPP2R3BQ9Y5P8 575 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms