RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 RBAK-RBAKDNI3L0D1 243 aa16.38■□□□□ 0.21
RPP40-204ENST00000468105 VWA5AO00534 786 aa16.38■□□□□ 0.21
RPP40-204ENST00000468105 CTAGE5O15320 804 aa16.38■□□□□ 0.21
RPP40-204ENST00000468105 EEF2P13639 858 aaKnown RBP16.38■□□□□ 0.21
RPP40-204ENST00000468105 CSF2RAP15509 400 aa16.38■□□□□ 0.21
RPP40-204ENST00000468105 ICA1Q05084 483 aa16.38■□□□□ 0.21
RPP40-204ENST00000468105 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
RPP40-204ENST00000468105 VWCEQ96DN2 955 aa16.38■□□□□ 0.21
RPP40-204ENST00000468105 NECAB3Q96P71 396 aaPredicted RBP16.38■□□□□ 0.21
RPP40-204ENST00000468105 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
RPP40-204ENST00000468105 CXXC1Q9P0U4 656 aaPredicted RBP16.38■□□□□ 0.21
RPP40-204ENST00000468105 NRBP1Q9UHY1 535 aa16.38■□□□□ 0.21
RPP40-204ENST00000468105 MCM3APO60318 1980 aa16.38■□□□□ 0.21
RPP40-204ENST00000468105 WDR46O15213 610 aaKnown RBP16.37■□□□□ 0.21
RPP40-204ENST00000468105 AKR1A1P14550 325 aa16.37■□□□□ 0.21
RPP40-204ENST00000468105 STAT3P40763 770 aa16.37■□□□□ 0.21
RPP40-204ENST00000468105 CDK8P49336 464 aa16.37■□□□□ 0.21
RPP40-204ENST00000468105 CCDC85BQ15834 202 aaPredicted RBP16.37■□□□□ 0.21
RPP40-204ENST00000468105 MFSD5Q6N075 450 aa16.37■□□□□ 0.21
RPP40-204ENST00000468105 CERS3Q8IU89 383 aa16.37■□□□□ 0.21
RPP40-204ENST00000468105 EXOC6Q8TAG9 804 aa16.37■□□□□ 0.21
RPP40-204ENST00000468105 CRNKL1Q9BZJ0 848 aaKnown RBP16.37■□□□□ 0.21
RPP40-204ENST00000468105 STARD7Q9NQZ5 370 aa16.37■□□□□ 0.21
RPP40-204ENST00000468105 SLC5A4Q9NY91 659 aa16.37■□□□□ 0.21
RPP40-204ENST00000468105 DIS3Q9Y2L1 958 aaKnown RBP16.37■□□□□ 0.21
RPP40-204ENST00000468105 YBX2Q9Y2T7 364 aaKnown RBP16.37■□□□□ 0.21
RPP40-204ENST00000468105 UMODL1Q5DID0 1318 aa16.37■□□□□ 0.21
RPP40-204ENST00000468105 DNAJC25-GNG10A0A024R161 153 aa16.36■□□□□ 0.21
RPP40-204ENST00000468105 GOLIM4O00461 696 aa16.36■□□□□ 0.21
RPP40-204ENST00000468105 SLC25A27O95847 323 aa16.36■□□□□ 0.21
RPP40-204ENST00000468105 FAM83BQ5T0W9 1011 aa16.36■□□□□ 0.21
RPP40-204ENST00000468105 ZNF365Q70YC5 407 aa16.36■□□□□ 0.21
RPP40-204ENST00000468105 ASB2Q96Q27 587 aa16.36■□□□□ 0.21
RPP40-204ENST00000468105 TSEN34Q9BSV6 310 aaKnown RBP16.36■□□□□ 0.21
RPP40-204ENST00000468105 PPP1R9AQ9ULJ8 1098 aa16.36■□□□□ 0.21
RPP40-204ENST00000468105 DDX49Q9Y6V7 483 aaKnown RBP16.36■□□□□ 0.21
RPP40-204ENST00000468105 TCF20Q9UGU0 1960 aaKnown RBP16.36■□□□□ 0.21
RPP40-204ENST00000468105 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
RPP40-204ENST00000468105 C12orf60Q5U649 245 aa16.35■□□□□ 0.21
RPP40-204ENST00000468105 ADAMTS19Q8TE59 1207 aa16.35■□□□□ 0.21
RPP40-204ENST00000468105 PPP1R12CQ9BZL4 782 aa16.35■□□□□ 0.21
RPP40-204ENST00000468105 KATNBL1Q9H079 304 aa16.35■□□□□ 0.21
RPP40-204ENST00000468105 TRANK1O15050 2925 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 USP17L12C9JPN9 530 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 USP17L21D6R901 530 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 MBD4O95243 580 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 ASGR1P07306 291 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 CYP2C18P33260 490 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 KCTD2Q14681 263 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 TMEM63BQ5T3F8 832 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 FAM126BQ8IXS8 530 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 DNAJC2Q99543 621 aaKnown RBP16.34■□□□□ 0.21
RPP40-204ENST00000468105 ARHGEF10LQ9HCE6 1279 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 ZBTB40Q9NUA8 1239 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 SWAP70Q9UH65 585 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 ASTN1O14525 1302 aa16.34■□□□□ 0.21
RPP40-204ENST00000468105 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
RPP40-204ENST00000468105 MYOGP15173 224 aa16.33■□□□□ 0.2
RPP40-204ENST00000468105 MAMDC4Q6UXC1 1216 aa16.33■□□□□ 0.2
RPP40-204ENST00000468105 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.2
RPP40-204ENST00000468105 RHPN1Q8TCX5 695 aa16.33■□□□□ 0.2
RPP40-204ENST00000468105 ATXN2LQ8WWM7 1075 aaKnown RBP16.33■□□□□ 0.2
RPP40-204ENST00000468105 NKX2-4Q9H2Z4 354 aa16.33■□□□□ 0.2
RPP40-204ENST00000468105 ZHX1Q9UKY1 873 aaPredicted RBP16.33■□□□□ 0.2
RPP40-204ENST00000468105 GRIN2DO15399 1336 aa16.33■□□□□ 0.2
RPP40-204ENST00000468105 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.32■□□□□ 0.2
RPP40-204ENST00000468105 MOXD2PA6NHM9 499 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 CD4P01730 458 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 CST5P28325 142 aaPredicted RBP16.32■□□□□ 0.2
RPP40-204ENST00000468105 ADD2P35612 726 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 BEX3Q00994 111 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 AKNAD1Q5T1N1 836 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 CTR9Q6PD62 1173 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 UPF3AQ9H1J1 476 aaKnown RBP16.32■□□□□ 0.2
RPP40-204ENST00000468105 THEGQ9P2T0 379 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 FAM184BQ9ULE4 1060 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
RPP40-204ENST00000468105 ELP1O95163 1332 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 SYNGAP1Q96PV0 1343 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 ARVCFO00192 962 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 APBB1O00213 710 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 DUSP11O75319 330 aaKnown RBP16.31■□□□□ 0.2
RPP40-204ENST00000468105 RABGGTBP53611 331 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 TFF2Q03403 129 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 ACVR2BQ13705 512 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 CCDC144BQ3MJ40 725 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 SNRNP48Q6IEG0 339 aaKnown RBP16.31■□□□□ 0.2
RPP40-204ENST00000468105 TMED8Q6PL24 325 aaPredicted RBP16.31■□□□□ 0.2
RPP40-204ENST00000468105 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.31■□□□□ 0.2
RPP40-204ENST00000468105 CNPY2Q9Y2B0 182 aa16.31■□□□□ 0.2
RPP40-204ENST00000468105 C6orf222P0C671 652 aaPredicted RBP16.3■□□□□ 0.2
RPP40-204ENST00000468105 BMP1P13497 986 aa16.3■□□□□ 0.2
RPP40-204ENST00000468105 GJA9P57773 515 aa16.3■□□□□ 0.2
RPP40-204ENST00000468105 PPIGQ13427 754 aaKnown RBP eCLIP16.3■□□□□ 0.2
RPP40-204ENST00000468105 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
RPP40-204ENST00000468105 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
RPP40-204ENST00000468105 UHRF1Q96T88 793 aaPredicted RBP16.3■□□□□ 0.2
RPP40-204ENST00000468105 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms