RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SMARCA1P28370 1054 aa17.69■□□□□ 0.42
SNIP1-202ENST00000468040 TTBK2Q6IQ55 1244 aa17.69■□□□□ 0.42
SNIP1-202ENST00000468040 STAG2Q8N3U4 1231 aa17.69■□□□□ 0.42
SNIP1-202ENST00000468040 SMCR8Q8TEV9 937 aaPredicted RBP17.69■□□□□ 0.42
SNIP1-202ENST00000468040 SH2B1Q9NRF2 756 aaPredicted RBP17.69■□□□□ 0.42
SNIP1-202ENST00000468040 FBXO28Q9NVF7 368 aa17.69■□□□□ 0.42
SNIP1-202ENST00000468040 DSG3P32926 999 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 SLC16A2P36021 539 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 HERVK_113P62684 666 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 STK3Q13188 491 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 TAF1CQ15572 869 aaPredicted RBP17.68■□□□□ 0.42
SNIP1-202ENST00000468040 ME3Q16798 604 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 SYDE2Q5VT97 1194 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 CPLX2Q6PUV4 134 aaKnown RBP17.68■□□□□ 0.42
SNIP1-202ENST00000468040 LBX2Q6XYB7 198 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 DNAJC5GQ8N7S2 189 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 KIFC2Q96AC6 838 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 PRR12Q9ULL5 1215 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 PARP14Q460N5 1801 aa17.68■□□□□ 0.42
SNIP1-202ENST00000468040 SPDYE16A6NNV3 312 aaPredicted RBP17.67■□□□□ 0.42
SNIP1-202ENST00000468040 CPLX1O14810 134 aa17.67■□□□□ 0.42
SNIP1-202ENST00000468040 CD2BP2O95400 341 aaKnown RBP17.67■□□□□ 0.42
SNIP1-202ENST00000468040 CYP2C8P10632 490 aa17.67■□□□□ 0.42
SNIP1-202ENST00000468040 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
SNIP1-202ENST00000468040 CCT2P78371 535 aaKnown RBP17.67■□□□□ 0.42
SNIP1-202ENST00000468040 MAP2K1Q02750 393 aaPredicted RBP17.67■□□□□ 0.42
SNIP1-202ENST00000468040 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
SNIP1-202ENST00000468040 MB21D1Q8N884 522 aa17.67■□□□□ 0.42
SNIP1-202ENST00000468040 GTF3C6Q969F1 213 aa17.67■□□□□ 0.42
SNIP1-202ENST00000468040 SNX21Q969T3 373 aa17.67■□□□□ 0.42
SNIP1-202ENST00000468040 P2RX7Q99572 595 aaKnown RBP17.67■□□□□ 0.42
SNIP1-202ENST00000468040 SPZ1Q9BXG8 430 aa17.67■□□□□ 0.42
SNIP1-202ENST00000468040 UBA5Q9GZZ9 404 aa17.67■□□□□ 0.42
SNIP1-202ENST00000468040 ZFYVE28Q9HCC9 887 aa17.67■□□□□ 0.42
SNIP1-202ENST00000468040 FAM217BQ9NTX9 383 aaPredicted RBP17.67■□□□□ 0.42
SNIP1-202ENST00000468040 ADAMTS5Q9UNA0 930 aa17.67■□□□□ 0.42
SNIP1-202ENST00000468040 CA12O43570 354 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 ZBED4O75132 1171 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 CDKL5O76039 1030 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 PLEKHA8P1O95397 391 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 LARGE1O95461 756 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 CDC27P30260 824 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 SCRN1Q12765 414 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 ADGRF4Q8IZF3 695 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 ATG4CQ96DT6 458 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 NCOA5Q9HCD5 579 aaKnown RBP17.66■□□□□ 0.42
SNIP1-202ENST00000468040 CTDP1Q9Y5B0 961 aaPredicted RBP17.66■□□□□ 0.42
SNIP1-202ENST00000468040 RLFQ13129 1914 aa17.66■□□□□ 0.42
SNIP1-202ENST00000468040 VWA5AO00534 786 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 ADD1P35611 737 aaKnown RBP17.65■□□□□ 0.42
SNIP1-202ENST00000468040 CRHR2Q13324 411 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 SRBD1Q8N5C6 995 aaKnown RBP17.65■□□□□ 0.42
SNIP1-202ENST00000468040 TMX3Q96JJ7 454 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 BEGAINQ9BUH8 593 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 CFHR5Q9BXR6 569 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
SNIP1-202ENST00000468040 CPVLQ9H3G5 476 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 RIOX1Q9H6W3 641 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 SLC38A10Q9HBR0 1119 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 SAGE1Q9NXZ1 904 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 PNMA2Q9UL42 364 aa17.65■□□□□ 0.42
SNIP1-202ENST00000468040 A0A0G2JMZ2 1700 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 CYTH3O43739 400 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 TLR2O60603 784 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 IFNAR1P17181 557 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 OAZ1P54368 228 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 NBPF11Q86T75 865 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 HSCBQ8IWL3 235 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
SNIP1-202ENST00000468040 NECAB1Q8N987 351 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 RRP36Q96EU6 259 aaKnown RBP17.64■□□□□ 0.41
SNIP1-202ENST00000468040 JMJD4Q9H9V9 463 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 VAT1LQ9HCJ6 419 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 RNF186Q9NXI6 227 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 RBM27Q9P2N5 1060 aaKnown RBP17.64■□□□□ 0.41
SNIP1-202ENST00000468040 RABGAP1Q9Y3P9 1069 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 ADGRA2Q96PE1 1338 aa17.64■□□□□ 0.41
SNIP1-202ENST00000468040 K7ELQ4 463 aaPredicted RBP17.63■□□□□ 0.41
SNIP1-202ENST00000468040 FUT2Q10981 343 aa17.63■□□□□ 0.41
SNIP1-202ENST00000468040 NTRK3Q16288 839 aa17.63■□□□□ 0.41
SNIP1-202ENST00000468040 CDC37Q16543 378 aaPredicted RBP17.63■□□□□ 0.41
SNIP1-202ENST00000468040 TRIM22Q8IYM9 498 aa17.63■□□□□ 0.41
SNIP1-202ENST00000468040 CCDC82Q8N4S0 544 aa17.63■□□□□ 0.41
SNIP1-202ENST00000468040 MTMR8Q96EF0 704 aa17.63■□□□□ 0.41
SNIP1-202ENST00000468040 SEC63Q9UGP8 760 aaKnown RBP17.63■□□□□ 0.41
SNIP1-202ENST00000468040 CNTNAP5Q8WYK1 1306 aa17.63■□□□□ 0.41
SNIP1-202ENST00000468040 ATP2A1O14983 1001 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 ZBTB5O15062 677 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 TRPA1O75762 1119 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 AKAP17AQ02040 695 aaKnown RBP17.62■□□□□ 0.41
SNIP1-202ENST00000468040 TRAF1Q13077 416 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 FAM110CQ1W6H9 321 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 SLC35G1Q2M3R5 365 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 HOMER1Q86YM7 354 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 CCDC83Q8IWF9 413 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 ANKRD13CQ8N6S4 541 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 REPS2Q8NFH8 660 aa17.62■□□□□ 0.41
SNIP1-202ENST00000468040 LLPHQ9BRT6 129 aaKnown RBP17.62■□□□□ 0.41
SNIP1-202ENST00000468040 PAGR1Q9BTK6 254 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms