RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TBX2Q13207 712 aaPredicted RBP20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 TRMT44Q8IYL2 757 aaKnown RBP20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 IGSF22Q8N9C0 903 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 WASF1Q92558 559 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 THRAP3Q9Y2W1 955 aaKnown RBP20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 LRP5O75197 1615 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 BAZ2BQ9UIF8 2168 aaKnown RBP20.27■□□□□ 0.84
SNAPC3-205ENST00000467062 H0YHG0 523 aa20.27■□□□□ 0.84
SNAPC3-205ENST00000467062 KIF4BQ2VIQ3 1234 aa20.27■□□□□ 0.84
SNAPC3-205ENST00000467062 IFIT1BQ5T764 474 aaKnown RBP20.27■□□□□ 0.84
SNAPC3-205ENST00000467062 ATXN2Q99700 1313 aaKnown RBP20.27■□□□□ 0.84
SNAPC3-205ENST00000467062 MCM3P25205 808 aa20.27■□□□□ 0.83
SNAPC3-205ENST00000467062 MECOMQ03112 1051 aa20.27■□□□□ 0.83
SNAPC3-205ENST00000467062 PKN1Q16512 942 aa20.27■□□□□ 0.83
SNAPC3-205ENST00000467062 FMNL3Q8IVF7 1028 aa20.27■□□□□ 0.83
SNAPC3-205ENST00000467062 FAM76AQ8TAV0 307 aa20.27■□□□□ 0.83
SNAPC3-205ENST00000467062 CSRNP2Q9H175 543 aa20.27■□□□□ 0.83
SNAPC3-205ENST00000467062 CAPN7Q9Y6W3 813 aa20.27■□□□□ 0.83
SNAPC3-205ENST00000467062 DDX60Q8IY21 1712 aaKnown RBP20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 MDM2Q00987 491 aaPredicted RBP20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 AKAP17AQ02040 695 aaKnown RBP20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 UBE4AQ14139 1066 aa20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 C11orf91Q3C1V1 193 aa20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 EPSTI1Q96J88 318 aa20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 GCFC2P16383 781 aaKnown RBP20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 PTPREP23469 700 aa20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 IRAK1P51617 712 aa20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 WHAMMP3Q1A5X7 153 aa20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 TMTC2Q8N394 836 aa20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 FOXP1Q9H334 677 aaPredicted RBP20.26■□□□□ 0.83
SNAPC3-205ENST00000467062 BCL9LQ86UU0 1499 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 CTAGE9A4FU28 777 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 ADAMTS3O15072 1205 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 RPS8P62241 208 aaKnown RBP20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 SF3B3Q15393 1217 aaKnown RBP20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 RILPL1Q5EBL4 403 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 AMOTL1Q8IY63 956 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 FMR1Q06787 632 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 TEX11Q8IYF3 940 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 TC2NQ8N9U0 490 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 N4BP2L2Q92802 583 aaPredicted RBP20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 FAXDC2Q96IV6 333 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 C8orf37Q96NL8 207 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 MTMR7Q9Y216 660 aa20.25■□□□□ 0.83
SNAPC3-205ENST00000467062 AFMP43652 599 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 IRX1P78414 480 aaPredicted RBP20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 POSTNQ15063 836 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 PREPLQ4J6C6 727 aaPredicted RBP20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 CLEC4GQ6UXB4 293 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 NBPF5PQ86XG9 351 aaPredicted RBP20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 BCAS4Q8TDM0 211 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 STAMQ92783 540 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 NSUN4Q96CB9 384 aaKnown RBP20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 DESI2Q9BSY9 194 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 KAT14Q9H8E8 782 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 MRPL44Q9H9J2 332 aaKnown RBP20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 MAN1B1Q9UKM7 699 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 RTL9Q8NET4 1388 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 A0A087X0B3 334 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 FAM237AA0A1B0GTK4 181 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 ZNF174Q15697 407 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 B4GALNT4Q76KP1 1039 aa20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 ZKSCAN4Q969J2 545 aaPredicted RBP20.24■□□□□ 0.83
SNAPC3-205ENST00000467062 NEBLO76041 1014 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 KIAA0754O94854 1291 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 PPFIA1Q13136 1202 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 CATIPQ7Z7H3 387 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 SPATS2Q86XZ4 545 aaKnown RBP20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 IRX2Q9BZI1 471 aaPredicted RBP20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 HPCAL4Q9UM19 191 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 GNPATO15228 680 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 COBLO75128 1261 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 FSBPO95073 299 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 TROAPQ12815 778 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 SPECC1LQ69YQ0 1117 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 GPR101Q96P66 508 aaPredicted RBP20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 SETDB2Q96T68 719 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 LZTFL1Q9NQ48 299 aa20.23■□□□□ 0.83
SNAPC3-205ENST00000467062 SARNPP82979 210 aaKnown RBP20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 FUT2Q10981 343 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 STIM1Q13586 685 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 CRYMQ14894 314 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 IQCA1Q86XH1 822 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 CCDC148Q8NFR7 591 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 ANAPC4Q9UJX5 808 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 FNTAP49354 379 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 ZNF569Q5MCW4 686 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 NLRP3Q96P20 1036 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 DCP1AQ9NPI6 582 aaPredicted RBP20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 ODF2LQ9ULJ1 636 aa20.22■□□□□ 0.83
SNAPC3-205ENST00000467062 HIBADHP31937 336 aaKnown RBP20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 ADKP55263 362 aaKnown RBP20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 FBXO33Q7Z6M2 555 aa20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 SRBD1Q8N5C6 995 aaKnown RBP20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 OTUD6BQ8N6M0 293 aa20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 MED15Q96RN5 788 aa20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 CAPS2Q9BXY5 557 aa20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 INTS13Q9NVM9 706 aa20.21■□□□□ 0.83
SNAPC3-205ENST00000467062 SRPRBQ9Y5M8 271 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms