RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 IL17RAQ96F46 866 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 C22orf23Q9BZE7 217 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 UPF3BQ9BZI7 483 aaKnown RBP16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 UPF2Q9HAU5 1272 aaKnown RBP16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 RLFQ13129 1914 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 ZBED4O75132 1171 aa16.88■□□□□ 0.29
DNMT3A-208ENST00000466601 DDAH1O94760 285 aa16.88■□□□□ 0.29
DNMT3A-208ENST00000466601 SLC16A2P36021 539 aa16.88■□□□□ 0.29
DNMT3A-208ENST00000466601 GRM4Q14833 912 aa16.88■□□□□ 0.29
DNMT3A-208ENST00000466601 NUP133Q8WUM0 1156 aa16.88■□□□□ 0.29
DNMT3A-208ENST00000466601 BACH2Q9BYV9 841 aa16.88■□□□□ 0.29
DNMT3A-208ENST00000466601 PRR12Q9ULL5 1215 aa16.88■□□□□ 0.29
DNMT3A-208ENST00000466601 CTDP1Q9Y5B0 961 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-208ENST00000466601 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
DNMT3A-208ENST00000466601 PARP14Q460N5 1801 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 ECM2O94769 699 aaPredicted RBP16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 CALM1P0DP23 149 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 CALM2P0DP24 149 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 CALM3P0DP25 149 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 FDX1P10109 184 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 TMEM132BQ14DG7 1078 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 SYDE2Q5VT97 1194 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 SYNE3Q6ZMZ3 975 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 FBXL16Q8N461 479 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 REPS2Q8NFH8 660 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 MAP3K14Q99558 947 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 UBA5Q9GZZ9 404 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 SLC38A10Q9HBR0 1119 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 MAD2L2Q9UI95 211 aa16.87■□□□□ 0.29
DNMT3A-208ENST00000466601 CASP8AP2Q9UKL3 1982 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 PALM3A6NDB9 673 aaPredicted RBP16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 PSMC4P43686 418 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 RBM25P49756 843 aaKnown RBP16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 CCNA1P78396 465 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 PLS1Q14651 629 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 ARHGEF6Q15052 776 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 STAG2Q8N3U4 1231 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 CTCFLQ8NI51 663 aaPredicted RBP16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 BRF1Q92994 677 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 AGXT2Q9BYV1 514 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 ARHGAP39Q9C0H5 1083 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 SPATC1LQ9H0A9 340 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 PDRG1Q9NUG6 133 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
DNMT3A-208ENST00000466601 KLF18A0A0U1RQI7 1052 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 KLRF2D3W0D1 207 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 FMNL1O95466 1100 aaPredicted RBP16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 RXRAP19793 462 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 CTGFP29279 349 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 FCGRTP55899 365 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 SNAP25P60880 206 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 CAP1Q01518 475 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 APOBRQ0VD83 1088 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 APOA5Q6Q788 366 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 RAB11FIP4Q86YS3 637 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 CCAR1Q8IX12 1150 aaKnown RBP16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 CPXCR1Q8N123 301 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 CPVLQ9H3G5 476 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 EFCC1Q9HA90 598 aa16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 RAVER2Q9HCJ3 691 aaKnown RBP16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 ZNF214Q9UL59 606 aaPredicted RBP16.85■□□□□ 0.29
DNMT3A-208ENST00000466601 A0A0G2JMZ2 1700 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 ZBTB43O43298 467 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 MAPK4P31152 587 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 KIF5BP33176 963 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 STAT3P40763 770 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 OAZ1P54368 228 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 TOB2Q14106 344 aaPredicted RBP16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 MICU3Q86XE3 530 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 CCDC144CPQ8IYA2 1237 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 ADGRF4Q8IZF3 695 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 FANCBQ8NB91 859 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 TRIM47Q96LD4 638 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 PORCNQ9H237 461 aa16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 RANBP17Q9H2T7 1088 aaKnown RBP16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
DNMT3A-208ENST00000466601 TNPO2O14787 897 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 ATP2A1O14983 1001 aa16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 DHX16O60231 1041 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 SLC25A27O95847 323 aa16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 CCDC174Q6PII3 467 aa16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 CTU1Q7Z7A3 348 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 RIOX2Q8IUF8 465 aa16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 SHCBP1Q8NEM2 672 aa16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 TEX13BQ9BXU2 312 aa16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 VAT1LQ9HCJ6 419 aa16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 TRIM17Q9Y577 477 aa16.83■□□□□ 0.28
DNMT3A-208ENST00000466601 ZNF536O15090 1300 aa16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 GNRH1P01148 92 aa16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 ERCC3P19447 782 aa16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 HOXD10P28358 340 aa16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 SLC4A3P48751 1232 aa16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 GNAQP50148 359 aa16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 NEK4P51957 841 aa16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 RCAN1P53805 252 aa16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 WDR78Q5VTH9 848 aa16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 SNRNP48Q6IEG0 339 aaKnown RBP16.82■□□□□ 0.28
DNMT3A-208ENST00000466601 OTOP1Q7RTM1 612 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms