RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 PHF24Q9UPV7 400 aa20.6■□□□□ 0.89
CYTH3-205ENST00000466543 STXBP5LQ9Y2K9 1186 aa20.6■□□□□ 0.89
CYTH3-205ENST00000466543 DNAJC25-GNG10A0A024R161 153 aa20.59■□□□□ 0.89
CYTH3-205ENST00000466543 TDO2P48775 406 aa20.59■□□□□ 0.89
CYTH3-205ENST00000466543 SHHQ15465 462 aa20.59■□□□□ 0.89
CYTH3-205ENST00000466543 IFNL3Q8IZI9 196 aa20.59■□□□□ 0.89
CYTH3-205ENST00000466543 LRRC47Q8N1G4 583 aaKnown RBP20.59■□□□□ 0.89
CYTH3-205ENST00000466543 BADQ92934 168 aa20.59■□□□□ 0.89
CYTH3-205ENST00000466543 GUCD1Q96NT3 240 aa20.59■□□□□ 0.89
CYTH3-205ENST00000466543 NRBP1Q9UHY1 535 aa20.59■□□□□ 0.89
CYTH3-205ENST00000466543 SNAI1O95863 264 aaPredicted RBP20.58■□□□□ 0.89
CYTH3-205ENST00000466543 ZFYP08048 801 aaPredicted RBP20.58■□□□□ 0.89
CYTH3-205ENST00000466543 RARBP10826 455 aa20.58■□□□□ 0.89
CYTH3-205ENST00000466543 IRX5P78411 483 aaPredicted RBP20.58■□□□□ 0.89
CYTH3-205ENST00000466543 TLE2Q04725 743 aa20.58■□□□□ 0.89
CYTH3-205ENST00000466543 C1orf53Q5VUE5 145 aa20.58■□□□□ 0.89
CYTH3-205ENST00000466543 CPXCR1Q8N123 301 aa20.58■□□□□ 0.89
CYTH3-205ENST00000466543 GPATCH3Q96I76 525 aa20.58■□□□□ 0.89
CYTH3-205ENST00000466543 FGD4Q96M96 766 aa20.58■□□□□ 0.89
CYTH3-205ENST00000466543 MTMR4Q9NYA4 1195 aa20.58■□□□□ 0.89
CYTH3-205ENST00000466543 PRKAG2Q9UGJ0 569 aa20.58■□□□□ 0.89
CYTH3-205ENST00000466543 PATL2C9JE40 543 aaKnown RBP20.57■□□□□ 0.88
CYTH3-205ENST00000466543 DLL1O00548 723 aa20.57■□□□□ 0.88
CYTH3-205ENST00000466543 FOXP2O15409 715 aa20.57■□□□□ 0.88
CYTH3-205ENST00000466543 ADAMTS4O75173 837 aa20.57■□□□□ 0.88
CYTH3-205ENST00000466543 APPP05067 770 aa20.57■□□□□ 0.88
CYTH3-205ENST00000466543 COPB2P35606 906 aa20.57■□□□□ 0.88
CYTH3-205ENST00000466543 SLC4A3P48751 1232 aa20.57■□□□□ 0.88
CYTH3-205ENST00000466543 PRPF38AQ8NAV1 312 aaKnown RBP20.57■□□□□ 0.88
CYTH3-205ENST00000466543 MKL1Q969V6 931 aa20.57■□□□□ 0.88
CYTH3-205ENST00000466543 KIFC2Q96AC6 838 aa20.57■□□□□ 0.88
CYTH3-205ENST00000466543 FAM161BQ96MY7 647 aa20.57■□□□□ 0.88
CYTH3-205ENST00000466543 RAVER2Q9HCJ3 691 aaKnown RBP20.57■□□□□ 0.88
CYTH3-205ENST00000466543 A0A1W2PQ45 241 aaPredicted RBP20.56■□□□□ 0.88
CYTH3-205ENST00000466543 A0A1W2PQY0 241 aa20.56■□□□□ 0.88
CYTH3-205ENST00000466543 ATP2A1O14983 1001 aa20.56■□□□□ 0.88
CYTH3-205ENST00000466543 ADCY6O43306 1168 aa20.56■□□□□ 0.88
CYTH3-205ENST00000466543 GNAT2P19087 354 aa20.56■□□□□ 0.88
CYTH3-205ENST00000466543 ZNF444Q8N0Y2 327 aaPredicted RBP20.56■□□□□ 0.88
CYTH3-205ENST00000466543 SLC38A10Q9HBR0 1119 aa20.56■□□□□ 0.88
CYTH3-205ENST00000466543 PLIN4Q96Q06 1357 aa20.56■□□□□ 0.88
CYTH3-205ENST00000466543 CUL9Q8IWT3 2517 aa20.56■□□□□ 0.88
CYTH3-205ENST00000466543 TTC41PQ6P2S7 1318 aa20.55■□□□□ 0.88
CYTH3-205ENST00000466543 SYNRGQ9UMZ2 1314 aa20.55■□□□□ 0.88
CYTH3-205ENST00000466543 MYADML2A6NDP7 307 aa20.55■□□□□ 0.88
CYTH3-205ENST00000466543 AKR1A1P14550 325 aa20.55■□□□□ 0.88
CYTH3-205ENST00000466543 EPHB4P54760 987 aa20.55■□□□□ 0.88
CYTH3-205ENST00000466543 ZMYM1Q5SVZ6 1142 aa20.55■□□□□ 0.88
CYTH3-205ENST00000466543 FAM109BQ6ICB4 259 aaPredicted RBP20.55■□□□□ 0.88
CYTH3-205ENST00000466543 MAMDC4Q6UXC1 1216 aa20.55■□□□□ 0.88
CYTH3-205ENST00000466543 TACC3Q9Y6A5 838 aa20.55■□□□□ 0.88
CYTH3-205ENST00000466543 PRUNE2Q8WUY3 3088 aa20.55■□□□□ 0.88
CYTH3-205ENST00000466543 CCDC129Q6ZRS4 1044 aa20.54■□□□□ 0.88
CYTH3-205ENST00000466543 RNF180Q86T96 592 aa20.54■□□□□ 0.88
CYTH3-205ENST00000466543 GMCL1P1Q8NEA9 526 aa20.54■□□□□ 0.88
CYTH3-205ENST00000466543 NEDD1Q8NHV4 660 aa20.54■□□□□ 0.88
CYTH3-205ENST00000466543 CHMP4CQ96CF2 233 aa20.54■□□□□ 0.88
CYTH3-205ENST00000466543 DDX11Q96FC9 970 aa20.54■□□□□ 0.88
CYTH3-205ENST00000466543 INCENPQ9NQS7 918 aa20.54■□□□□ 0.88
CYTH3-205ENST00000466543 CNPY2Q9Y2B0 182 aa20.54■□□□□ 0.88
CYTH3-205ENST00000466543 SYNGAP1Q96PV0 1343 aa20.53■□□□□ 0.88
CYTH3-205ENST00000466543 SALL3Q9BXA9 1300 aa20.53■□□□□ 0.88
CYTH3-205ENST00000466543 TTLL1O95922 423 aa20.53■□□□□ 0.88
CYTH3-205ENST00000466543 PPARAQ07869 468 aa20.53■□□□□ 0.88
CYTH3-205ENST00000466543 SLFN13Q68D06 897 aa20.53■□□□□ 0.88
CYTH3-205ENST00000466543 CCSAPQ6IQ19 270 aaPredicted RBP20.53■□□□□ 0.88
CYTH3-205ENST00000466543 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.53■□□□□ 0.88
CYTH3-205ENST00000466543 RASGRP2Q7LDG7 609 aa20.53■□□□□ 0.88
CYTH3-205ENST00000466543 KLHDC9Q8NEP7 349 aa20.53■□□□□ 0.88
CYTH3-205ENST00000466543 FEM1BQ9UK73 627 aa20.53■□□□□ 0.88
CYTH3-205ENST00000466543 PQBP1O60828 265 aaKnown RBP20.52■□□□□ 0.88
CYTH3-205ENST00000466543 ZBED4O75132 1171 aa20.52■□□□□ 0.88
CYTH3-205ENST00000466543 TFAP4Q01664 338 aa20.52■□□□□ 0.88
CYTH3-205ENST00000466543 MSL3Q8N5Y2 521 aaKnown RBP20.52■□□□□ 0.88
CYTH3-205ENST00000466543 FSD1Q9BTV5 496 aa20.52■□□□□ 0.88
CYTH3-205ENST00000466543 ZHX1Q9UKY1 873 aaPredicted RBP20.52■□□□□ 0.88
CYTH3-205ENST00000466543 VCANP13611 3396 aa20.52■□□□□ 0.88
CYTH3-205ENST00000466543 KIAA0355O15063 1070 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 CLTBP09497 229 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 TSPY3P0CV98 308 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 TSPY8P0CW00 308 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 BMP3P12645 472 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 ACLYP53396 1101 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 ZNF467Q7Z7K2 595 aaPredicted RBP20.51■□□□□ 0.87
CYTH3-205ENST00000466543 KATNBL1Q9H079 304 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 NAPBQ9H115 298 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 ZNF287Q9HBT7 754 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.51■□□□□ 0.87
CYTH3-205ENST00000466543 FAM184BQ9ULE4 1060 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 SYNPO2Q9UMS6 1093 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.51■□□□□ 0.87
CYTH3-205ENST00000466543 ZNF536O15090 1300 aa20.51■□□□□ 0.87
CYTH3-205ENST00000466543 TMEM232C9JQI7 657 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 ERC2O15083 957 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 NMT2O60551 498 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 MX1P20591 662 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 CNTN2Q02246 1040 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 FAAP100Q0VG06 881 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 ACVR2BQ13705 512 aa20.5■□□□□ 0.87
CYTH3-205ENST00000466543 KCNA10Q16322 511 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms