RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 KRT222Q8N1A0 295 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 SP7Q8TDD2 431 aaPredicted RBP7.75□□□□□ -1.17
CDHR3-204ENST00000466351 CCDC47Q96A33 483 aaKnown RBP7.75□□□□□ -1.17
CDHR3-204ENST00000466351 SHISA4Q96DD7 197 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 NAP1L4Q99733 375 aaKnown RBP7.75□□□□□ -1.17
CDHR3-204ENST00000466351 ZMYND12Q9H0C1 365 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 THAP9Q9H5L6 903 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 DISC1Q9NRI5 854 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 ZNF646O15015 1829 aaPredicted RBP7.75□□□□□ -1.17
CDHR3-204ENST00000466351 FAM205AQ6ZU69 1335 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 CCDC194A0A1B0GVG4 234 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 BICDL2A1A5D9 508 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 KLRG2A4D1S0 409 aaPredicted RBP7.74□□□□□ -1.17
CDHR3-204ENST00000466351 VWA3AA6NCI4 1184 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 PPP1R3GB7ZBB8 358 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 PSMA7O14818 248 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 GNPATO15228 680 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 ONECUT3O60422 494 aaPredicted RBP7.74□□□□□ -1.17
CDHR3-204ENST00000466351 TADA3O75528 432 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 HOXA10P31260 410 aaPredicted RBP7.74□□□□□ -1.17
CDHR3-204ENST00000466351 DYNLL1P63167 89 aaKnown RBP7.74□□□□□ -1.17
CDHR3-204ENST00000466351 GRIN1Q05586 938 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 BMS1Q14692 1282 aaKnown RBP7.74□□□□□ -1.17
CDHR3-204ENST00000466351 FIGNQ5HY92 759 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 SLC27A3Q5K4L6 730 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 WWC2Q6AWC2 1192 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 MCTP2Q6DN12 878 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 RASGRP2Q7LDG7 609 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 FAM114A1Q8IWE2 563 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 GPR161Q8N6U8 529 aaKnown RBP7.74□□□□□ -1.17
CDHR3-204ENST00000466351 C4orf32Q8N8J7 132 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 CNBD1Q8NA66 436 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 EHBP1Q8NDI1 1231 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 NEDD1Q8NHV4 660 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 DPF2Q92785 391 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 DHX58Q96C10 678 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 CRAMP1Q96RY5 1269 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 LRRC27Q9C0I9 530 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 GLT8D2Q9H1C3 349 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 INCENPQ9NQS7 918 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 KBTBD4Q9NVX7 518 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 MCM9Q9NXL9 1143 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 STK17AQ9UEE5 414 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 CCNL1Q9UK58 526 aaPredicted RBP7.74□□□□□ -1.17
CDHR3-204ENST00000466351 PARP3Q9Y6F1 533 aa7.74□□□□□ -1.17
CDHR3-204ENST00000466351 COL2A1P02458 1487 aaPredicted RBP7.74□□□□□ -1.17
CDHR3-204ENST00000466351 A0A087WWV3 80 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 A0A087X0B3 334 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 FAM177BA6PVY3 158 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 UBE2Q2LH0YL09 131 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 KCNQ2O43526 872 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 BBOX1O75936 387 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 RPN1P04843 607 aaKnown RBP7.73□□□□□ -1.17
CDHR3-204ENST00000466351 TSPY3P0CV98 308 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 TSPY8P0CW00 308 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 RASA1P20936 1047 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 USP5P45974 858 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 MAP3K9P80192 1104 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 CDK17Q00537 523 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 AMPD3Q01432 767 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 DMTNQ08495 405 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 SEPT2Q15019 361 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 ASPRV1Q53RT3 343 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 SYT10Q6XYQ8 523 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 DTHD1Q6ZMT9 781 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 PIK3AP1Q6ZUJ8 805 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 IGSF22Q8N9C0 903 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 MNS1Q8NEH6 495 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 UBXN4Q92575 508 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 ZNF592Q92610 1267 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 RABGGTAQ92696 567 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 DHTKD1Q96HY7 919 aaPredicted RBP7.73□□□□□ -1.17
CDHR3-204ENST00000466351 EPSTI1Q96J88 318 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 MED15Q96RN5 788 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 NUP58Q9BVL2 599 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 RTFDC1Q9BY42 306 aaPredicted RBP7.73□□□□□ -1.17
CDHR3-204ENST00000466351 RAB34Q9BZG1 259 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 C6orf50Q9HD87 102 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 ZNHIT6Q9NWK9 470 aaKnown RBP7.73□□□□□ -1.17
CDHR3-204ENST00000466351 TRMT1Q9NXH9 659 aaKnown RBP7.73□□□□□ -1.17
CDHR3-204ENST00000466351 MAD2L2Q9UI95 211 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 MRFAP1Q9Y605 127 aa7.73□□□□□ -1.17
CDHR3-204ENST00000466351 CCDC151A5D8V7 595 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 LGALS16A8MUM7 142 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 TMEM232C9JQI7 657 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 STXBP3O00186 592 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 FOXN1O15353 648 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 OR52Z1P0C646 297 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 SNHG28P0DPA3 235 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 GCFC2P16383 781 aaKnown RBP7.72□□□□□ -1.17
CDHR3-204ENST00000466351 CASQ1P31415 396 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 RFC4P35249 363 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 STAT6P42226 847 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 DNM2P50570 870 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 ST5P78524 1137 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 TFAP4Q01664 338 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 NONOQ15233 471 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDHR3-204ENST00000466351 FAM98CQ17RN3 349 aaKnown RBP7.72□□□□□ -1.17
CDHR3-204ENST00000466351 TCP11X2Q5H9J9 407 aa7.72□□□□□ -1.17
CDHR3-204ENST00000466351 TRAPPC3LQ5T215 181 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms