RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 CST5P28325 142 aaPredicted RBP17.48■□□□□ 0.39
CXCR4-203ENST00000466288 MAMDC4Q6UXC1 1216 aa17.48■□□□□ 0.39
CXCR4-203ENST00000466288 LCORLQ8N3X6 602 aa17.48■□□□□ 0.39
CXCR4-203ENST00000466288 FAM122AQ96E09 287 aa17.48■□□□□ 0.39
CXCR4-203ENST00000466288 SYNGAP1Q96PV0 1343 aa17.48■□□□□ 0.39
CXCR4-203ENST00000466288 ZNF532Q9HCE3 1301 aa17.48■□□□□ 0.39
CXCR4-203ENST00000466288 SMIM22K7EJ46 135 aa17.47■□□□□ 0.39
CXCR4-203ENST00000466288 ADCY6O43306 1168 aa17.47■□□□□ 0.39
CXCR4-203ENST00000466288 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
CXCR4-203ENST00000466288 IGFBP4P22692 258 aa17.47■□□□□ 0.39
CXCR4-203ENST00000466288 COPB2P35606 906 aa17.47■□□□□ 0.39
CXCR4-203ENST00000466288 TTF1Q15361 905 aaPredicted RBP17.47■□□□□ 0.39
CXCR4-203ENST00000466288 PSRC1Q6PGN9 363 aaPredicted RBP17.47■□□□□ 0.39
CXCR4-203ENST00000466288 TMEM199Q8N511 208 aa17.47■□□□□ 0.39
CXCR4-203ENST00000466288 CCDC17Q96LX7 622 aa17.47■□□□□ 0.39
CXCR4-203ENST00000466288 NAV1Q8NEY1 1877 aa17.46■□□□□ 0.39
CXCR4-203ENST00000466288 DNAJC25-GNG10A0A024R161 153 aa17.46■□□□□ 0.39
CXCR4-203ENST00000466288 ARVCFO00192 962 aa17.46■□□□□ 0.39
CXCR4-203ENST00000466288 ASGR1P07306 291 aa17.46■□□□□ 0.39
CXCR4-203ENST00000466288 EEF2P13639 858 aaKnown RBP17.46■□□□□ 0.39
CXCR4-203ENST00000466288 RAB30Q15771 203 aa17.46■□□□□ 0.39
CXCR4-203ENST00000466288 AACSQ86V21 672 aa17.46■□□□□ 0.39
CXCR4-203ENST00000466288 FAM126BQ8IXS8 530 aa17.46■□□□□ 0.39
CXCR4-203ENST00000466288 HERVK_113Q902F9 699 aa17.46■□□□□ 0.39
CXCR4-203ENST00000466288 PPP1R12CQ9BZL4 782 aa17.46■□□□□ 0.39
CXCR4-203ENST00000466288 CXXC1Q9P0U4 656 aaPredicted RBP17.46■□□□□ 0.39
CXCR4-203ENST00000466288 ZHX1Q9UKY1 873 aaPredicted RBP17.46■□□□□ 0.39
CXCR4-203ENST00000466288 ZNFX1Q9P2E3 1918 aaKnown RBP17.46■□□□□ 0.39
CXCR4-203ENST00000466288 C6orf222P0C671 652 aaPredicted RBP17.45■□□□□ 0.38
CXCR4-203ENST00000466288 PCSK9Q8NBP7 692 aaKnown RBP17.45■□□□□ 0.38
CXCR4-203ENST00000466288 NKX2-4Q9H2Z4 354 aa17.45■□□□□ 0.38
CXCR4-203ENST00000466288 MSRAQ9UJ68 235 aa17.45■□□□□ 0.38
CXCR4-203ENST00000466288 PARP14Q460N5 1801 aa17.45■□□□□ 0.38
CXCR4-203ENST00000466288 A0A0U1RQG5 324 aaPredicted RBP17.44■□□□□ 0.38
CXCR4-203ENST00000466288 PRKAB2O43741 272 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 CDK8P49336 464 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 GJA9P57773 515 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 ACVR2BQ13705 512 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 FAM83BQ5T0W9 1011 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 NECAB3Q96P71 396 aaPredicted RBP17.44■□□□□ 0.38
CXCR4-203ENST00000466288 UPF3AQ9H1J1 476 aaKnown RBP17.44■□□□□ 0.38
CXCR4-203ENST00000466288 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 IL23AQ9NPF7 189 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 YBX2Q9Y2T7 364 aaKnown RBP17.44■□□□□ 0.38
CXCR4-203ENST00000466288 RIPK3Q9Y572 518 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 NCOR1O75376 2440 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 CYP2D7A0A087X1C5 515 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 CD4P01730 458 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 BMP1P13497 986 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
CXCR4-203ENST00000466288 CYP2C18P33260 490 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 C12orf60Q5U649 245 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 ZNF467Q7Z7K2 595 aaPredicted RBP17.44■□□□□ 0.38
CXCR4-203ENST00000466288 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 VTI1AQ96AJ9 217 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 TEX13BQ9BXU2 312 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 KANSL2Q9H9L4 492 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 SLC28A3Q9HAS3 691 aa17.44■□□□□ 0.38
CXCR4-203ENST00000466288 PLXNA1Q9UIW2 1896 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 TRANK1O15050 2925 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 CTAGE5O15320 804 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 CCDC144BQ3MJ40 725 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 GNASQ5JWF2 1037 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 ZKSCAN2Q63HK3 967 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 C16orf86Q6ZW13 317 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 DDX11Q96FC9 970 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 GOPCQ9HD26 462 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 ATP8A2Q9NTI2 1148 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.43■□□□□ 0.38
CXCR4-203ENST00000466288 EXOC6BQ9Y2D4 811 aa17.43■□□□□ 0.38
CXCR4-203ENST00000466288 COL11A1P12107 1806 aaPredicted RBP17.42■□□□□ 0.38
CXCR4-203ENST00000466288 APBB1O00213 710 aa17.42■□□□□ 0.38
CXCR4-203ENST00000466288 GOLIM4O00461 696 aa17.42■□□□□ 0.38
CXCR4-203ENST00000466288 NKX3-2P78367 333 aa17.42■□□□□ 0.38
CXCR4-203ENST00000466288 SLFNL1Q499Z3 407 aa17.42■□□□□ 0.38
CXCR4-203ENST00000466288 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
CXCR4-203ENST00000466288 FGD4Q96M96 766 aa17.42■□□□□ 0.38
CXCR4-203ENST00000466288 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.42■□□□□ 0.38
CXCR4-203ENST00000466288 C1QTNF1Q9BXJ1 281 aa17.42■□□□□ 0.38
CXCR4-203ENST00000466288 ABHD16BQ9H3Z7 469 aa17.42■□□□□ 0.38
CXCR4-203ENST00000466288 SPC25Q9HBM1 224 aa17.42■□□□□ 0.38
CXCR4-203ENST00000466288 USP17L12C9JPN9 530 aa17.41■□□□□ 0.38
CXCR4-203ENST00000466288 USP17L21D6R901 530 aa17.41■□□□□ 0.38
CXCR4-203ENST00000466288 TLR3O15455 904 aaKnown RBP17.41■□□□□ 0.38
CXCR4-203ENST00000466288 FGBP02675 491 aa17.41■□□□□ 0.38
CXCR4-203ENST00000466288 TFF2Q03403 129 aa17.41■□□□□ 0.38
CXCR4-203ENST00000466288 CEP85Q6P2H3 762 aa17.41■□□□□ 0.38
CXCR4-203ENST00000466288 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
CXCR4-203ENST00000466288 SLC43A3Q8NBI5 491 aa17.41■□□□□ 0.38
CXCR4-203ENST00000466288 NUP88Q99567 741 aaPredicted RBP17.41■□□□□ 0.38
CXCR4-203ENST00000466288 SLF1Q9BQI6 1058 aa17.41■□□□□ 0.38
CXCR4-203ENST00000466288 MTIF3Q9H2K0 278 aaKnown RBP17.41■□□□□ 0.38
CXCR4-203ENST00000466288 IL1RAPL2Q9NP60 686 aa17.41■□□□□ 0.38
CXCR4-203ENST00000466288 UMODL1Q5DID0 1318 aa17.4■□□□□ 0.38
CXCR4-203ENST00000466288 RAD21O60216 631 aa17.4■□□□□ 0.38
CXCR4-203ENST00000466288 MBD4O95243 580 aa17.4■□□□□ 0.38
CXCR4-203ENST00000466288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.4■□□□□ 0.38
CXCR4-203ENST00000466288 OTOP2Q7RTS6 562 aa17.4■□□□□ 0.38
CXCR4-203ENST00000466288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.4■□□□□ 0.38
CXCR4-203ENST00000466288 DNAJC2Q99543 621 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms