RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SLC1A4P43007 532 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 TRIM32Q13049 653 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 TMEM132BQ14DG7 1078 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 CCL14Q16627 93 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 KIAA1211Q6ZU35 1233 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 GMCL1P1Q8NEA9 526 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 SOCS4Q8WXH5 440 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 MKL1Q969V6 931 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 TMEM47Q9BQJ4 181 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 HTTP42858 3142 aa11.47□□□□□ -0.57
RTFDC1-205ENST00000466260 VWA5AO00534 786 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 CCL5P13501 91 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 ZKSCAN1P17029 563 aaPredicted RBP11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 EN2P19622 333 aaPredicted RBP11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 PTPREP23469 700 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 RGS2P41220 211 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 STAT2P52630 851 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 SNAP25P60880 206 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 IRF5Q13568 498 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 BMP2KLQ5H9B9 411 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 PPP4R3BQ5MIZ7 849 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 SNRNP48Q6IEG0 339 aaKnown RBP11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 MB21D1Q8N884 522 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 TRIB2Q92519 343 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 ESYT1Q9BSJ8 1104 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 RNF208Q9H0X6 261 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 UNC93B1Q9H1C4 597 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 RAVER2Q9HCJ3 691 aaKnown RBP11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 GPCPD1Q9NPB8 672 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 ANO2Q9NQ90 1003 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 GJD2Q9UKL4 321 aa11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 RBM8AQ9Y5S9 174 aaKnown RBP11.46□□□□□ -0.57
RTFDC1-205ENST00000466260 MCM3APO60318 1980 aa11.46□□□□□ -0.58
RTFDC1-205ENST00000466260 KIAA0100Q14667 2235 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 TNKSO95271 1327 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 ZBED4O75132 1171 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 CYP21A2P08686 494 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 TOP1P11387 765 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 PCP11498 1178 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 SLC16A2P36021 539 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 STAT3P40763 770 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 MLLT1Q03111 559 aaPredicted RBP11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 TRDNQ13061 729 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 MAP2K5Q13163 448 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 CCDC174Q6PII3 467 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 IQCA1Q86XH1 822 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 NPLOC4Q8TAT6 608 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 APBA2Q99767 749 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 KRT23Q9C075 422 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 FEM1BQ9UK73 627 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 TAF6LQ9Y6J9 622 aa11.45□□□□□ -0.58
RTFDC1-205ENST00000466260 CDC45O75419 566 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 HMGCRP04035 888 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 TAL1P17542 331 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 ADORA2AP29274 412 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 MORN1Q5T089 497 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 TTBK2Q6IQ55 1244 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 RCSD1Q6JBY9 416 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 CASC1Q6TDU7 716 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 CYB5R4Q7L1T6 521 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 CHST3Q7LGC8 479 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 DPP9Q86TI2 863 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 PRPF38AQ8NAV1 312 aaKnown RBP11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 REPS2Q8NFH8 660 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 PXYLP1Q8TE99 480 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 GMCL1Q96IK5 515 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 MMP19Q99542 508 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 KAT14Q9H8E8 782 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 CNNM2Q9H8M5 875 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 HOMER2Q9NSB8 354 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 TCP11L1Q9NUJ3 509 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 ZSWIM5Q9P217 1185 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 ZNF214Q9UL59 606 aaPredicted RBP11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 SYNPO2Q9UMS6 1093 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 BRCA2P51587 3418 aa11.44□□□□□ -0.58
RTFDC1-205ENST00000466260 SLC15A5A6NIM6 579 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 E7EWF7 191 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 SLC25A27O95847 323 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 PGK2P07205 417 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 GOLGA8HP0CJ92 632 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 GRB14Q14449 540 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 STOX1Q6ZVD7 989 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 FAM160B2Q86V87 743 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 RIOX2Q8IUF8 465 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 PNMA1Q8ND90 353 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 SHCBP1Q8NEM2 672 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 DCAF4Q8WV16 495 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 DEFB118Q96PH6 123 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 ZSCAN10Q96SZ4 725 aaPredicted RBP11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 TEX13BQ9BXU2 312 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 LSG1Q9H089 658 aaKnown RBP11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 MROH8Q9H579 483 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 FLRT1Q9NZU1 646 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 RIPK3Q9Y572 518 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 LCTP09848 1927 aa11.43□□□□□ -0.58
RTFDC1-205ENST00000466260 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms