RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 POU3F3P20264 500 aaPredicted RBP11.84□□□□□ -0.51
USP39-212ENST00000465514 DYNLL1P63167 89 aaKnown RBP11.84□□□□□ -0.51
USP39-212ENST00000465514 PLS1Q14651 629 aa11.84□□□□□ -0.51
USP39-212ENST00000465514 KCNA10Q16322 511 aa11.84□□□□□ -0.51
USP39-212ENST00000465514 ITPRIPQ8IWB1 547 aa11.84□□□□□ -0.51
USP39-212ENST00000465514 FTSJ3Q8IY81 847 aaKnown RBP11.84□□□□□ -0.51
USP39-212ENST00000465514 ABRAQ8N0Z2 381 aa11.84□□□□□ -0.51
USP39-212ENST00000465514 CCDC8Q9H0W5 538 aaPredicted RBP11.84□□□□□ -0.51
USP39-212ENST00000465514 MROH8Q9H579 483 aa11.84□□□□□ -0.51
USP39-212ENST00000465514 CERS4Q9HA82 394 aa11.84□□□□□ -0.51
USP39-212ENST00000465514 TLR7Q9NYK1 1049 aaKnown RBP11.84□□□□□ -0.51
USP39-212ENST00000465514 DBNLQ9UJU6 430 aaKnown RBP11.84□□□□□ -0.51
USP39-212ENST00000465514 PCDHA11Q9Y5I1 949 aa11.84□□□□□ -0.51
USP39-212ENST00000465514 C5orf42Q9H799 3197 aa11.84□□□□□ -0.51
USP39-212ENST00000465514 SCN5AQ14524 2016 aa11.84□□□□□ -0.51
USP39-212ENST00000465514 MYADML2A6NDP7 307 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 EPOPA6NHQ4 379 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 HLA-DOAP06340 250 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 ZNF865P0CJ78 1059 aaPredicted RBP11.83□□□□□ -0.52
USP39-212ENST00000465514 RLBP1P12271 317 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 FCER1AP12319 257 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 CYP7A1P22680 504 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 CDK7P50613 346 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 HNRNPUQ00839 825 aaKnown RBP eCLIP11.83□□□□□ -0.52
USP39-212ENST00000465514 CSPP1Q1MSJ5 1256 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 CCSAPQ6IQ19 270 aaPredicted RBP11.83□□□□□ -0.52
USP39-212ENST00000465514 FAM126BQ8IXS8 530 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 EAF2Q96CJ1 260 aaPredicted RBP11.83□□□□□ -0.52
USP39-212ENST00000465514 GLT1D1Q96MS3 346 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 TINF2Q9BSI4 451 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 TANGO6Q9C0B7 1094 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 ELP1O95163 1332 aa11.83□□□□□ -0.52
USP39-212ENST00000465514 IGSF3O75054 1194 aa11.82□□□□□ -0.52
USP39-212ENST00000465514 PGK2P07205 417 aa11.82□□□□□ -0.52
USP39-212ENST00000465514 CA3P07451 260 aa11.82□□□□□ -0.52
USP39-212ENST00000465514 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
USP39-212ENST00000465514 COG2Q14746 738 aa11.82□□□□□ -0.52
USP39-212ENST00000465514 KLHDC9Q8NEP7 349 aa11.82□□□□□ -0.52
USP39-212ENST00000465514 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
USP39-212ENST00000465514 SLC4A7Q9Y6M7 1214 aa11.82□□□□□ -0.52
USP39-212ENST00000465514 UMODL1Q5DID0 1318 aa11.82□□□□□ -0.52
USP39-212ENST00000465514 NAV1Q8NEY1 1877 aa11.81□□□□□ -0.52
USP39-212ENST00000465514 A0A0U1RQG5 324 aaPredicted RBP11.81□□□□□ -0.52
USP39-212ENST00000465514 ARVCFO00192 962 aa11.81□□□□□ -0.52
USP39-212ENST00000465514 TLR3O15455 904 aaKnown RBP11.81□□□□□ -0.52
USP39-212ENST00000465514 IDH1O75874 414 aaKnown RBP11.81□□□□□ -0.52
USP39-212ENST00000465514 ATP2A2P16615 1042 aaKnown RBP11.81□□□□□ -0.52
USP39-212ENST00000465514 TATDN1Q6P1N9 297 aa11.81□□□□□ -0.52
USP39-212ENST00000465514 MAGEB6Q8N7X4 407 aa11.81□□□□□ -0.52
USP39-212ENST00000465514 MB21D1Q8N884 522 aa11.81□□□□□ -0.52
USP39-212ENST00000465514 MIGA1Q8NAN2 632 aa11.81□□□□□ -0.52
USP39-212ENST00000465514 VTI1AQ96AJ9 217 aa11.81□□□□□ -0.52
USP39-212ENST00000465514 KCNH6Q9H252 994 aa11.81□□□□□ -0.52
USP39-212ENST00000465514 PTPRSQ13332 1948 aa11.81□□□□□ -0.52
USP39-212ENST00000465514 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 ASGR1P07306 291 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 USP5P45974 858 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 ABCB5Q2M3G0 1257 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 CEP85Q6P2H3 762 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 GJD3Q8N144 294 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 ARNTL2Q8WYA1 636 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 PHOX2BQ99453 314 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 MMP19Q99542 508 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 HIPK3Q9H422 1215 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 ANTXR1Q9H6X2 564 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 CNPY2Q9Y2B0 182 aa11.8□□□□□ -0.52
USP39-212ENST00000465514 CD4P01730 458 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 C6orf222P0C671 652 aaPredicted RBP11.79□□□□□ -0.52
USP39-212ENST00000465514 CST5P28325 142 aaPredicted RBP11.79□□□□□ -0.52
USP39-212ENST00000465514 SSTR3P32745 418 aaPredicted RBP11.79□□□□□ -0.52
USP39-212ENST00000465514 GUCY1A2P33402 732 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 CCL23P55773 120 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 ZNF792Q3KQV3 632 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 CERKLQ49MI3 558 aaPredicted RBP11.79□□□□□ -0.52
USP39-212ENST00000465514 TMEM67Q5HYA8 995 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 AACSQ86V21 672 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 CERS3Q8IU89 383 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 FAM178BQ8IXR5 827 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 MIER1Q8N108 512 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 ATG4CQ96DT6 458 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 EXOC6BQ9Y2D4 811 aa11.79□□□□□ -0.52
USP39-212ENST00000465514 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 ADCY6O43306 1168 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 FLOT1O75955 427 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 ARHGEF15O94989 841 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 ALADP13716 330 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 KIAA1755Q5JYT7 1200 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 PCSK9Q8NBP7 692 aaKnown RBP11.78□□□□□ -0.52
USP39-212ENST00000465514 PANK1Q8TE04 598 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 ANKS1AQ92625 1134 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 WNT8AQ9H1J5 351 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 EHD4Q9H223 541 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 SERPINB13Q9UIV8 391 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 ZHX1Q9UKY1 873 aaPredicted RBP11.78□□□□□ -0.52
USP39-212ENST00000465514 FAM184BQ9ULE4 1060 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 DIS3Q9Y2L1 958 aaKnown RBP11.78□□□□□ -0.52
USP39-212ENST00000465514 TANC1Q9C0D5 1861 aa11.78□□□□□ -0.52
USP39-212ENST00000465514 DUSP11O75319 330 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms