RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 PRPF38AQ8NAV1 312 aaKnown RBP13.68□□□□□ -0.22
CUX1-207ENST00000465461 IGDCC4Q8TDY8 1250 aa13.68□□□□□ -0.22
CUX1-207ENST00000465461 SH3TC2Q8TF17 1288 aa13.68□□□□□ -0.22
CUX1-207ENST00000465461 DCAF4Q8WV16 495 aa13.68□□□□□ -0.22
CUX1-207ENST00000465461 COA7Q96BR5 231 aa13.68□□□□□ -0.22
CUX1-207ENST00000465461 UBA5Q9GZZ9 404 aa13.68□□□□□ -0.22
CUX1-207ENST00000465461 SNX14Q9Y5W7 946 aa13.68□□□□□ -0.22
CUX1-207ENST00000465461 SEC24BO95487 1268 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 ERCC3P19447 782 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 CYP2B6P20813 491 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 ZNF543Q08ER8 600 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 WTAPQ15007 396 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 CCDC174Q6PII3 467 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 PLEKHH3Q7Z736 793 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 RAB11FIP4Q86YS3 637 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 RAET1EQ8TD07 263 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
CUX1-207ENST00000465461 GJD2Q9UKL4 321 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 ZNF214Q9UL59 606 aaPredicted RBP13.67□□□□□ -0.22
CUX1-207ENST00000465461 PRR12Q9ULL5 1215 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 RIPK3Q9Y572 518 aa13.67□□□□□ -0.22
CUX1-207ENST00000465461 ERICH2A1L162 156 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 CCDC85CA6NKD9 419 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 ZBED4O75132 1171 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 GNRH1P01148 92 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 SNHG28P0DPA3 235 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 ELNP15502 786 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 ZKSCAN1P17029 563 aaPredicted RBP13.66□□□□□ -0.22
CUX1-207ENST00000465461 MAPK4P31152 587 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 MCM5P33992 734 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 STAT3P40763 770 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 NT5C2P49902 561 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 CCNA1P78396 465 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 FAM160B2Q86V87 743 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 STAG2Q8N3U4 1231 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 MB21D1Q8N884 522 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 CHURC1Q8WUH1 139 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 KCNB2Q92953 911 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 LY9Q9HBG7 655 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 SLC38A10Q9HBR0 1119 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 CTDP1Q9Y5B0 961 aaPredicted RBP13.66□□□□□ -0.22
CUX1-207ENST00000465461 PLXNB2O15031 1838 aa13.66□□□□□ -0.22
CUX1-207ENST00000465461 SH2B2O14492 632 aaPredicted RBP13.65□□□□□ -0.22
CUX1-207ENST00000465461 PTPREP23469 700 aa13.65□□□□□ -0.22
CUX1-207ENST00000465461 TSGA10IPQ3SY00 556 aa13.65□□□□□ -0.22
CUX1-207ENST00000465461 SYDE2Q5VT97 1194 aa13.65□□□□□ -0.22
CUX1-207ENST00000465461 SNRNP48Q6IEG0 339 aaKnown RBP13.65□□□□□ -0.22
CUX1-207ENST00000465461 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
CUX1-207ENST00000465461 JAKMIP1Q96N16 626 aaKnown RBP13.65□□□□□ -0.22
CUX1-207ENST00000465461 ZNF536O15090 1300 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 ADCY3O60266 1144 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 PLA2G6O60733 806 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 PARP1P09874 1014 aaKnown RBP13.64□□□□□ -0.23
CUX1-207ENST00000465461 RXRAP19793 462 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 PRMT2P55345 433 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
CUX1-207ENST00000465461 SART3Q15020 963 aaKnown RBP13.64□□□□□ -0.23
CUX1-207ENST00000465461 CCL14Q16627 93 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 SLC9C1Q4G0N8 1177 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 MORN1Q5T089 497 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 BTNL9Q6UXG8 535 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 NFXL1Q6ZNB6 911 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 RIOX2Q8IUF8 465 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 NUP133Q8WUM0 1156 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 NUDT12Q9BQG2 462 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 VAT1LQ9HCJ6 419 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
CUX1-207ENST00000465461 GRK4P32298 578 aa13.63□□□□□ -0.23
CUX1-207ENST00000465461 TRIM32Q13049 653 aa13.63□□□□□ -0.23
CUX1-207ENST00000465461 DHX32Q7L7V1 743 aaKnown RBP13.63□□□□□ -0.23
CUX1-207ENST00000465461 CCDC144CPQ8IYA2 1237 aa13.63□□□□□ -0.23
CUX1-207ENST00000465461 SHCBP1Q8NEM2 672 aa13.63□□□□□ -0.23
CUX1-207ENST00000465461 NPLOC4Q8TAT6 608 aa13.63□□□□□ -0.23
CUX1-207ENST00000465461 USP6NLQ92738 828 aa13.63□□□□□ -0.23
CUX1-207ENST00000465461 TEX13BQ9BXU2 312 aa13.63□□□□□ -0.23
CUX1-207ENST00000465461 RANBP17Q9H2T7 1088 aaKnown RBP13.63□□□□□ -0.23
CUX1-207ENST00000465461 MAD2L2Q9UI95 211 aa13.63□□□□□ -0.23
CUX1-207ENST00000465461 IVNS1ABPQ9Y6Y0 642 aa13.63□□□□□ -0.23
CUX1-207ENST00000465461 COBLO75128 1261 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 SLC25A27O95847 323 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 PGK2P07205 417 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 ALAS1P13196 640 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 ADORA2AP29274 412 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 TROAPQ12815 778 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 MAP2K5Q13163 448 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 IRF5Q13568 498 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 GRB14Q14449 540 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 KRT32Q14532 448 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 GRM4Q14833 912 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 MTFR1Q15390 333 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 SLC35G1Q2M3R5 365 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 C8orf34Q49A92 452 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 CATIPQ7Z7H3 387 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 NBPF11Q86T75 865 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 ADGRF4Q8IZF3 695 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 ZNF654Q8IZM8 581 aa13.62□□□□□ -0.23
CUX1-207ENST00000465461 TRIB2Q92519 343 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms