RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 GDF15Q99988 308 aa17.71■□□□□ 0.43
MRPL55-225ENST00000465268 SENP6Q9GZR1 1112 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-225ENST00000465268 RWDD1Q9H446 243 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-225ENST00000465268 ANAPC4Q9UJX5 808 aa17.71■□□□□ 0.43
MRPL55-225ENST00000465268 ALPK3Q96L96 1907 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 ZNF236Q9UL36 1845 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 SEPT4O43236 478 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 NUCB1Q02818 461 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 KCTD2Q14681 263 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 ALX1Q15699 326 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 MCMDC2Q4G0Z9 681 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 RILPL2Q969X0 211 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 TEX13BQ9BXU2 312 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 SLC38A10Q9HBR0 1119 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 MYH8P13535 1937 aa17.7■□□□□ 0.42
MRPL55-225ENST00000465268 TRIM6-TRIM34B2RNG4 842 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 TMEM232C9JQI7 657 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 SOX1O00570 391 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-225ENST00000465268 MSCO60682 206 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 SLC3A2P08195 630 aaKnown RBP17.69■□□□□ 0.42
MRPL55-225ENST00000465268 FGRP09769 529 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
MRPL55-225ENST00000465268 BMP3P12645 472 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 MCCP23508 829 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 ATN1P54259 1190 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-225ENST00000465268 SNAP25P60880 206 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 AAMPQ13685 434 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 LENG1Q96BZ8 264 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-225ENST00000465268 FGD4Q96M96 766 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 SLC5A4Q9NY91 659 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 FEM1BQ9UK73 627 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 SYNPO2Q9UMS6 1093 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
MRPL55-225ENST00000465268 PARP14Q460N5 1801 aa17.69■□□□□ 0.42
MRPL55-225ENST00000465268 DNAJC25-GNG10A0A024R161 153 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 TSPY2A6NKD2 308 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 DNM1LO00429 736 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 ATP2A1O14983 1001 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 ZBED4O75132 1171 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 ZNF865P0CJ78 1059 aaPredicted RBP17.68■□□□□ 0.42
MRPL55-225ENST00000465268 SDSP20132 328 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 MAGEA10P43363 369 aaPredicted RBP17.68■□□□□ 0.42
MRPL55-225ENST00000465268 NOVP48745 357 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 DNAH12Q6ZR08 3092 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 TINF2Q9BSI4 451 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 STX8Q9UNK0 236 aa17.68■□□□□ 0.42
MRPL55-225ENST00000465268 ORC4O43929 436 aa17.67■□□□□ 0.42
MRPL55-225ENST00000465268 RANBP6O60518 1105 aaKnown RBP17.67■□□□□ 0.42
MRPL55-225ENST00000465268 HAND2P61296 217 aa17.67■□□□□ 0.42
MRPL55-225ENST00000465268 KCTD1Q719H9 257 aa17.67■□□□□ 0.42
MRPL55-225ENST00000465268 GMCL1Q96IK5 515 aa17.67■□□□□ 0.42
MRPL55-225ENST00000465268 OSBPL3Q9H4L5 887 aa17.67■□□□□ 0.42
MRPL55-225ENST00000465268 DIS3Q9Y2L1 958 aaKnown RBP17.67■□□□□ 0.42
MRPL55-225ENST00000465268 ZNF536O15090 1300 aa17.67■□□□□ 0.42
MRPL55-225ENST00000465268 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
MRPL55-225ENST00000465268 MYCNP04198 464 aaPredicted RBP17.66■□□□□ 0.42
MRPL55-225ENST00000465268 COPB2P35606 906 aa17.66■□□□□ 0.42
MRPL55-225ENST00000465268 SLC1A4P43007 532 aa17.66■□□□□ 0.42
MRPL55-225ENST00000465268 LRRC41Q15345 812 aa17.66■□□□□ 0.42
MRPL55-225ENST00000465268 TBC1D10CQ8IV04 446 aa17.66■□□□□ 0.42
MRPL55-225ENST00000465268 LRCH3Q96II8 777 aa17.66■□□□□ 0.42
MRPL55-225ENST00000465268 AGBL1Q96MI9 1066 aa17.66■□□□□ 0.42
MRPL55-225ENST00000465268 ISY1Q9ULR0 285 aaKnown RBP17.66■□□□□ 0.42
MRPL55-225ENST00000465268 MTMR7Q9Y216 660 aa17.66■□□□□ 0.42
MRPL55-225ENST00000465268 CCDC171Q6TFL3 1326 aa17.66■□□□□ 0.42
MRPL55-225ENST00000465268 IRX6P78412 446 aaPredicted RBP17.65■□□□□ 0.42
MRPL55-225ENST00000465268 RRP12Q5JTH9 1297 aaKnown RBP17.65■□□□□ 0.42
MRPL55-225ENST00000465268 TTBK2Q6IQ55 1244 aa17.65■□□□□ 0.42
MRPL55-225ENST00000465268 STAG1Q8WVM7 1258 aa17.65■□□□□ 0.42
MRPL55-225ENST00000465268 HOMER2Q9NSB8 354 aa17.65■□□□□ 0.42
MRPL55-225ENST00000465268 COL11A1P12107 1806 aaPredicted RBP17.65■□□□□ 0.42
MRPL55-225ENST00000465268 PGK1P00558 417 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 PDE4AP27815 886 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 BMP8BP34820 402 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 ADCYAP1R1P41586 468 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 STAT2P52630 851 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 RTP1P59025 263 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 IRX5P78411 483 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-225ENST00000465268 RCSD1Q6JBY9 416 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.64■□□□□ 0.41
MRPL55-225ENST00000465268 ARRDC4Q8NCT1 418 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 FERMT2Q96AC1 680 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 DDX11Q96FC9 970 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 TOMM22Q9NS69 142 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 NRBP1Q9UHY1 535 aa17.64■□□□□ 0.41
MRPL55-225ENST00000465268 CTDP1Q9Y5B0 961 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-225ENST00000465268 DDX49Q9Y6V7 483 aaKnown RBP17.64■□□□□ 0.41
MRPL55-225ENST00000465268 ADCY6O43306 1168 aa17.63■□□□□ 0.41
MRPL55-225ENST00000465268 MDM2Q00987 491 aaPredicted RBP17.63■□□□□ 0.41
MRPL55-225ENST00000465268 CNTN2Q02246 1040 aa17.63■□□□□ 0.41
MRPL55-225ENST00000465268 CCDC174Q6PII3 467 aa17.63■□□□□ 0.41
MRPL55-225ENST00000465268 MAMDC4Q6UXC1 1216 aa17.63■□□□□ 0.41
MRPL55-225ENST00000465268 SLC39A5Q6ZMH5 540 aa17.63■□□□□ 0.41
MRPL55-225ENST00000465268 TMEM47Q9BQJ4 181 aa17.63■□□□□ 0.41
MRPL55-225ENST00000465268 IL25Q9H293 177 aa17.63■□□□□ 0.41
MRPL55-225ENST00000465268 XPNPEP3Q9NQH7 507 aa17.63■□□□□ 0.41
MRPL55-225ENST00000465268 PRR12Q9ULL5 1215 aa17.63■□□□□ 0.41
MRPL55-225ENST00000465268 A0A1W2PPC1 479 aa17.62■□□□□ 0.41
MRPL55-225ENST00000465268 SLC16A2P36021 539 aa17.62■□□□□ 0.41
MRPL55-225ENST00000465268 OAZ1P54368 228 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms