RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 KLHDC9Q8NEP7 349 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 FGD4Q96M96 766 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 STRBPQ96SI9 672 aaKnown RBP13.14□□□□□ -0.31
COL11A1-207ENST00000465209 NUP88Q99567 741 aaPredicted RBP13.14□□□□□ -0.31
COL11A1-207ENST00000465209 EPB41L4AQ9HCS5 686 aaPredicted RBP13.14□□□□□ -0.31
COL11A1-207ENST00000465209 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
COL11A1-207ENST00000465209 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 ATP2A1O14983 1001 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 SMARCA5O60264 1052 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-207ENST00000465209 SNAI1O95863 264 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-207ENST00000465209 NDUFB10O96000 172 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-207ENST00000465209 FAAP100Q0VG06 881 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 KCTD2Q14681 263 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 ANKRD33Q7Z3H0 272 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 RNF180Q86T96 592 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 AMOTL1Q8IY63 956 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
COL11A1-207ENST00000465209 OSBP2Q969R2 916 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 NYAP2Q9P242 653 aa13.13□□□□□ -0.31
COL11A1-207ENST00000465209 PLIN4Q96Q06 1357 aa13.12□□□□□ -0.31
COL11A1-207ENST00000465209 MYADML2A6NDP7 307 aa13.12□□□□□ -0.31
COL11A1-207ENST00000465209 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
COL11A1-207ENST00000465209 GIMAP6Q6P9H5 292 aa13.12□□□□□ -0.31
COL11A1-207ENST00000465209 TSEN34Q9BSV6 310 aaKnown RBP13.12□□□□□ -0.31
COL11A1-207ENST00000465209 LRRCC1Q9C099 1032 aa13.12□□□□□ -0.31
COL11A1-207ENST00000465209 BCL11AQ9H165 835 aa13.12□□□□□ -0.31
COL11A1-207ENST00000465209 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
COL11A1-207ENST00000465209 TTC28Q96AY4 2481 aa13.12□□□□□ -0.31
COL11A1-207ENST00000465209 TMEM265A0A087WTH1 108 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 F5H6K3 240 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 PQBP1O60828 265 aaKnown RBP13.11□□□□□ -0.31
COL11A1-207ENST00000465209 CST5P28325 142 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-207ENST00000465209 ACLYP53396 1101 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 IRX5P78411 483 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-207ENST00000465209 KLRC3Q07444 240 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 SNRNP48Q6IEG0 339 aaKnown RBP13.11□□□□□ -0.31
COL11A1-207ENST00000465209 ZSCAN25Q6NSZ9 544 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 ZNF467Q7Z7K2 595 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-207ENST00000465209 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 MYLIPQ8WY64 445 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 DDRGK1Q96HY6 314 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 TOX2Q96NM4 488 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 TBX21Q9UL17 535 aa13.11□□□□□ -0.31
COL11A1-207ENST00000465209 GBF1Q92538 1859 aa13.1□□□□□ -0.31
COL11A1-207ENST00000465209 MOXD2PA6NHM9 499 aa13.1□□□□□ -0.31
COL11A1-207ENST00000465209 M0R2C6 588 aa13.1□□□□□ -0.31
COL11A1-207ENST00000465209 PRPF38AQ8NAV1 312 aaKnown RBP13.1□□□□□ -0.31
COL11A1-207ENST00000465209 MAFAQ8NHW3 353 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-207ENST00000465209 APPBP2Q92624 585 aa13.1□□□□□ -0.31
COL11A1-207ENST00000465209 MKL1Q969V6 931 aa13.1□□□□□ -0.31
COL11A1-207ENST00000465209 RNPC3Q96LT9 517 aaKnown RBP13.1□□□□□ -0.31
COL11A1-207ENST00000465209 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
COL11A1-207ENST00000465209 ECHDC1Q9NTX5 307 aa13.1□□□□□ -0.31
COL11A1-207ENST00000465209 CNPY2Q9Y2B0 182 aa13.1□□□□□ -0.31
COL11A1-207ENST00000465209 CTAGE5O15320 804 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 GPAA1O43292 621 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 DUSP11O75319 330 aaKnown RBP13.09□□□□□ -0.31
COL11A1-207ENST00000465209 RAG1P15918 1043 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 CDK7P50613 346 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 NKX3-2P78367 333 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 KCNA10Q16322 511 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 TSHZ3Q63HK5 1081 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 STARD7Q9NQZ5 370 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 SYNPO2Q9UMS6 1093 aa13.09□□□□□ -0.31
COL11A1-207ENST00000465209 RAD21O60216 631 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 FPGSQ05932 587 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 ACVR2BQ13705 512 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 RASIP1Q5U651 963 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 STK11IPQ8N1F8 1099 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 GMCL1P1Q8NEA9 526 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 CHMP4BQ9H444 224 aaKnown RBP13.08□□□□□ -0.32
COL11A1-207ENST00000465209 RAVER2Q9HCJ3 691 aaKnown RBP13.08□□□□□ -0.32
COL11A1-207ENST00000465209 TMEM39AQ9NV64 488 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.08□□□□□ -0.32
COL11A1-207ENST00000465209 MTMR4Q9NYA4 1195 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 CLIP2Q9UDT6 1046 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 ZHX1Q9UKY1 873 aaPredicted RBP13.08□□□□□ -0.32
COL11A1-207ENST00000465209 FAM184BQ9ULE4 1060 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 ZNF536O15090 1300 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 ELP1O95163 1332 aa13.08□□□□□ -0.32
COL11A1-207ENST00000465209 MINDY4BA8MYZ0 360 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 FOXP2O15409 715 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 RNF113AO15541 343 aaKnown RBP13.07□□□□□ -0.32
COL11A1-207ENST00000465209 PRDM1O75626 825 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 TIMP1P01033 207 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 DNAJB2P25686 324 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 OAZ1P54368 228 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 GJA9P57773 515 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 C16orf59Q7L2K0 433 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 ARMCX2Q7L311 632 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 CPXCR1Q8N123 301 aa13.07□□□□□ -0.32
COL11A1-207ENST00000465209 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms