RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 SLF1Q9BQI6 1058 aa17.55■□□□□ 0.4
MCF2L-220ENST00000464800 TEX13BQ9BXU2 312 aa17.55■□□□□ 0.4
MCF2L-220ENST00000464800 PRDM6Q9NQX0 595 aa17.55■□□□□ 0.4
MCF2L-220ENST00000464800 FAM184BQ9ULE4 1060 aa17.55■□□□□ 0.4
MCF2L-220ENST00000464800 PRUNE2Q8WUY3 3088 aa17.54■□□□□ 0.4
MCF2L-220ENST00000464800 MROH7Q68CQ1 1323 aa17.54■□□□□ 0.4
MCF2L-220ENST00000464800 ATP5JP18859 108 aa17.54■□□□□ 0.4
MCF2L-220ENST00000464800 GRIN2CQ14957 1233 aa17.54■□□□□ 0.4
MCF2L-220ENST00000464800 UBE3CQ15386 1083 aa17.54■□□□□ 0.4
MCF2L-220ENST00000464800 SNRNP48Q6IEG0 339 aaKnown RBP17.54■□□□□ 0.4
MCF2L-220ENST00000464800 CTR9Q6PD62 1173 aa17.54■□□□□ 0.4
MCF2L-220ENST00000464800 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-220ENST00000464800 DDX11Q96FC9 970 aa17.54■□□□□ 0.4
MCF2L-220ENST00000464800 HAUS7Q99871 368 aa17.54■□□□□ 0.4
MCF2L-220ENST00000464800 ARPP21Q9UBL0 812 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-220ENST00000464800 ZHX1Q9UKY1 873 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-220ENST00000464800 RAB11FIP3O75154 756 aa17.53■□□□□ 0.4
MCF2L-220ENST00000464800 TIMP1P01033 207 aa17.53■□□□□ 0.4
MCF2L-220ENST00000464800 KCNA10Q16322 511 aa17.53■□□□□ 0.4
MCF2L-220ENST00000464800 MAMDC4Q6UXC1 1216 aa17.53■□□□□ 0.4
MCF2L-220ENST00000464800 KLHDC9Q8NEP7 349 aa17.53■□□□□ 0.4
MCF2L-220ENST00000464800 NUP88Q99567 741 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-220ENST00000464800 ZNF576Q9H609 170 aa17.53■□□□□ 0.4
MCF2L-220ENST00000464800 DUSP11O75319 330 aaKnown RBP17.52■□□□□ 0.4
MCF2L-220ENST00000464800 SNAI1O95863 264 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-220ENST00000464800 CHGBP05060 677 aa17.52■□□□□ 0.4
MCF2L-220ENST00000464800 MS4A1P11836 297 aa17.52■□□□□ 0.4
MCF2L-220ENST00000464800 ZSCAN25Q6NSZ9 544 aa17.52■□□□□ 0.4
MCF2L-220ENST00000464800 CCDC174Q6PII3 467 aa17.52■□□□□ 0.4
MCF2L-220ENST00000464800 TIFAQ96CG3 184 aa17.52■□□□□ 0.4
MCF2L-220ENST00000464800 GLT1D1Q96MS3 346 aa17.52■□□□□ 0.4
MCF2L-220ENST00000464800 TBX21Q9UL17 535 aa17.52■□□□□ 0.4
MCF2L-220ENST00000464800 ELP1O95163 1332 aa17.51■□□□□ 0.39
MCF2L-220ENST00000464800 DNAJC25-GNG10A0A024R161 153 aa17.51■□□□□ 0.39
MCF2L-220ENST00000464800 MYADML2A6NDP7 307 aa17.51■□□□□ 0.39
MCF2L-220ENST00000464800 C6orf222P0C671 652 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-220ENST00000464800 CST5P28325 142 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-220ENST00000464800 PPIGQ13427 754 aaKnown RBP eCLIP17.51■□□□□ 0.398e-8■■■□□ 17
MCF2L-220ENST00000464800 TJAP1Q5JTD0 557 aa17.51■□□□□ 0.39
MCF2L-220ENST00000464800 CCSAPQ6IQ19 270 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-220ENST00000464800 MFSD5Q6N075 450 aa17.51■□□□□ 0.39
MCF2L-220ENST00000464800 ZNF467Q7Z7K2 595 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-220ENST00000464800 SIRT2Q8IXJ6 389 aa17.51■□□□□ 0.39
MCF2L-220ENST00000464800 USP38Q8NB14 1042 aa17.51■□□□□ 0.39
MCF2L-220ENST00000464800 PCSK9Q8NBP7 692 aaKnown RBP17.51■□□□□ 0.39
MCF2L-220ENST00000464800 TTC28Q96AY4 2481 aa17.51■□□□□ 0.39
MCF2L-220ENST00000464800 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.51■□□□□ 0.391e-9■■□□□ 11.6
MCF2L-220ENST00000464800 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.51■□□□□ 0.39
MCF2L-220ENST00000464800 RIPK3Q9Y572 518 aa17.51■□□□□ 0.39
MCF2L-220ENST00000464800 CTDP1Q9Y5B0 961 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-220ENST00000464800 SPTBN5Q9NRC6 3674 aaKnown RBP17.5■□□□□ 0.39
MCF2L-220ENST00000464800 ATP2A1O14983 1001 aa17.5■□□□□ 0.39
MCF2L-220ENST00000464800 NDUFB10O96000 172 aa17.5■□□□□ 0.39
MCF2L-220ENST00000464800 RASA1P20936 1047 aa17.5■□□□□ 0.39
MCF2L-220ENST00000464800 SLC4A3P48751 1232 aa17.5■□□□□ 0.39
MCF2L-220ENST00000464800 MIER1Q8N108 512 aa17.5■□□□□ 0.39
MCF2L-220ENST00000464800 PRPF38AQ8NAV1 312 aaKnown RBP17.5■□□□□ 0.39
MCF2L-220ENST00000464800 PUS7LQ9H0K6 701 aaKnown RBP17.5■□□□□ 0.39
MCF2L-220ENST00000464800 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
MCF2L-220ENST00000464800 NYAP2Q9P242 653 aa17.5■□□□□ 0.39
MCF2L-220ENST00000464800 GBF1Q92538 1859 aa17.5■□□□□ 0.39
MCF2L-220ENST00000464800 A0A0U1RQG5 324 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-220ENST00000464800 F5H6K3 240 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 ZBED4O75132 1171 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 ASGR1P07306 291 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 KLRC3Q07444 240 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 ACVR2BQ13705 512 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 CPXCR1Q8N123 301 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 VTI1AQ96AJ9 217 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 GAS2L1Q99501 681 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-220ENST00000464800 ABHD16BQ9H3Z7 469 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 MKNK2Q9HBH9 465 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-220ENST00000464800 DDX19BQ9UMR2 479 aa17.49■□□□□ 0.39
MCF2L-220ENST00000464800 LRRC37A2A6NM11 1700 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 ADCY6O43306 1168 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 CDK7P50613 346 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 CCDC144BQ3MJ40 725 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 SBK1Q52WX2 424 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 TMEM240Q5SV17 173 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 PSRC1Q6PGN9 363 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-220ENST00000464800 CCDC129Q6ZRS4 1044 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.48■□□□□ 0.39
MCF2L-220ENST00000464800 STK11IPQ8N1F8 1099 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 ANKRD35Q8N283 1001 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 TMEM199Q8N511 208 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 UPF3AQ9H1J1 476 aaKnown RBP17.48■□□□□ 0.39
MCF2L-220ENST00000464800 ZBTB40Q9NUA8 1239 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 FBXO40Q9UH90 709 aa17.48■□□□□ 0.39
MCF2L-220ENST00000464800 ARVCFO00192 962 aa17.47■□□□□ 0.39
MCF2L-220ENST00000464800 TLR3O15455 904 aaKnown RBP17.47■□□□□ 0.39
MCF2L-220ENST00000464800 CSF2RAP15509 400 aa17.47■□□□□ 0.39
MCF2L-220ENST00000464800 GJA9P57773 515 aa17.47■□□□□ 0.39
MCF2L-220ENST00000464800 IRX5P78411 483 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-220ENST00000464800 ARMCX2Q7L311 632 aa17.47■□□□□ 0.39
MCF2L-220ENST00000464800 KIFC2Q96AC6 838 aa17.47■□□□□ 0.39
MCF2L-220ENST00000464800 STRBPQ96SI9 672 aaKnown RBP17.47■□□□□ 0.39
MCF2L-220ENST00000464800 PBX4Q9BYU1 374 aa17.47■□□□□ 0.39
MCF2L-220ENST00000464800 PPP1R12CQ9BZL4 782 aa17.47■□□□□ 0.39
MCF2L-220ENST00000464800 SLC38A10Q9HBR0 1119 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms