RNA–Protein interactions for RNA: ENST00000464543.1

CCZ1B-205, Transcript of CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, human

TSL 2

Gene CCZ1B, Length 748 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCZ1B-205	ENST00000464543	RRP12	Q5JTH9	1297 aa	Known RBP	31.89	■■■□□ 2.7
CCZ1B-205	ENST00000464543	LHX8	Q68G74	356 aa		31.89	■■■□□ 2.7
CCZ1B-205	ENST00000464543	MMP19	Q99542	508 aa		31.89	■■■□□ 2.7
CCZ1B-205	ENST00000464543	TEX13B	Q9BXU2	312 aa		31.89	■■■□□ 2.7
CCZ1B-205	ENST00000464543	COPB2	P35606	906 aa		31.88	■■■□□ 2.69
CCZ1B-205	ENST00000464543	TTC22	Q5TAA0	569 aa		31.88	■■■□□ 2.69
CCZ1B-205	ENST00000464543	SNRNP48	Q6IEG0	339 aa	Known RBP	31.88	■■■□□ 2.69
CCZ1B-205	ENST00000464543	NECAB2	Q7Z6G3	386 aa		31.88	■■■□□ 2.69
CCZ1B-205	ENST00000464543	GMCL1	Q96IK5	515 aa		31.88	■■■□□ 2.69
CCZ1B-205	ENST00000464543	SLC5A4	Q9NY91	659 aa		31.88	■■■□□ 2.69
CCZ1B-205	ENST00000464543	PLXNA1	Q9UIW2	1896 aa		31.87	■■■□□ 2.69
CCZ1B-205	ENST00000464543		H0YGN5	161 aa		31.87	■■■□□ 2.69
CCZ1B-205	ENST00000464543	TBC1D10C	Q8IV04	446 aa		31.87	■■■□□ 2.69
CCZ1B-205	ENST00000464543	TRPV1	Q8NER1	839 aa		31.87	■■■□□ 2.69
CCZ1B-205	ENST00000464543	SLC38A10	Q9HBR0	1119 aa		31.87	■■■□□ 2.69
CCZ1B-205	ENST00000464543	ALPK3	Q96L96	1907 aa		31.87	■■■□□ 2.69
CCZ1B-205	ENST00000464543	ATP2A1	O14983	1001 aa		31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	ZBED4	O75132	1171 aa		31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	CYBA	P13498	195 aa		31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	MCC	P23508	829 aa		31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	AKNAD1	Q5T1N1	836 aa		31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	STAG1	Q8WVM7	1258 aa		31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	CHMP4C	Q96CF2	233 aa		31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	MAML3	Q96JK9	1138 aa		31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	ISY1	Q9ULR0	285 aa	Known RBP	31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	RIPK3	Q9Y572	518 aa		31.86	■■■□□ 2.69
CCZ1B-205	ENST00000464543	TMEM232	C9JQI7	657 aa		31.85	■■■□□ 2.69
CCZ1B-205	ENST00000464543	SLC1A4	P43007	532 aa		31.85	■■■□□ 2.69
CCZ1B-205	ENST00000464543	KCTD2	Q14681	263 aa		31.85	■■■□□ 2.69
CCZ1B-205	ENST00000464543	RASGRP2	Q7LDG7	609 aa		31.85	■■■□□ 2.69
CCZ1B-205	ENST00000464543	PGK2	P07205	417 aa		31.84	■■■□□ 2.69
CCZ1B-205	ENST00000464543	PC	P11498	1178 aa	Known RBP	31.84	■■■□□ 2.69
CCZ1B-205	ENST00000464543	STAT2	P52630	851 aa		31.84	■■■□□ 2.69
CCZ1B-205	ENST00000464543	MFSD6	Q6ZSS7	791 aa		31.84	■■■□□ 2.69
CCZ1B-205	ENST00000464543	CPXCR1	Q8N123	301 aa		31.84	■■■□□ 2.69
CCZ1B-205	ENST00000464543	RAVER2	Q9HCJ3	691 aa	Known RBP	31.84	■■■□□ 2.69
CCZ1B-205	ENST00000464543	CTDP1	Q9Y5B0	961 aa	Predicted RBP	31.84	■■■□□ 2.69
CCZ1B-205	ENST00000464543	CNGA1	P29973	690 aa		31.83	■■■□□ 2.69
CCZ1B-205	ENST00000464543	IL25	Q9H293	177 aa		31.83	■■■□□ 2.69
CCZ1B-205	ENST00000464543	TCP11L1	Q9NUJ3	509 aa		31.83	■■■□□ 2.69
CCZ1B-205	ENST00000464543	DDX20	Q9UHI6	824 aa	Known RBP	31.83	■■■□□ 2.69
CCZ1B-205	ENST00000464543	FAM160B2	Q86V87	743 aa		31.82	■■■□□ 2.68
CCZ1B-205	ENST00000464543	CHURC1	Q8WUH1	139 aa		31.82	■■■□□ 2.68
CCZ1B-205	ENST00000464543	DSCC1	Q9BVC3	393 aa		31.82	■■■□□ 2.68
CCZ1B-205	ENST00000464543	NEDD4	P46934	1319 aa		31.81	■■■□□ 2.68
CCZ1B-205	ENST00000464543	ZNF213	O14771	459 aa		31.81	■■■□□ 2.68
CCZ1B-205	ENST00000464543	OAZ1	P54368	228 aa		31.81	■■■□□ 2.68
CCZ1B-205	ENST00000464543	ZNF792	Q3KQV3	632 aa		31.81	■■■□□ 2.68
CCZ1B-205	ENST00000464543	RCSD1	Q6JBY9	416 aa		31.81	■■■□□ 2.68
CCZ1B-205	ENST00000464543	KCTD1	Q719H9	257 aa		31.81	■■■□□ 2.68
CCZ1B-205	ENST00000464543	RNF41	Q9H4P4	317 aa	Predicted RBP	31.81	■■■□□ 2.68
CCZ1B-205	ENST00000464543	C11orf49	Q9H6J7	331 aa		31.81	■■■□□ 2.68
CCZ1B-205	ENST00000464543	DNAH12	Q6ZR08	3092 aa		31.81	■■■□□ 2.68
CCZ1B-205	ENST00000464543	MSC	O60682	206 aa		31.8	■■■□□ 2.68
CCZ1B-205	ENST00000464543	PLA2G6	O60733	806 aa		31.8	■■■□□ 2.68
CCZ1B-205	ENST00000464543	FDX1	P10109	184 aa		31.8	■■■□□ 2.68
CCZ1B-205	ENST00000464543	SLC4A3	P48751	1232 aa		31.8	■■■□□ 2.68
CCZ1B-205	ENST00000464543	IK	Q13123	557 aa	Predicted RBP	31.8	■■■□□ 2.68
CCZ1B-205	ENST00000464543	TMEM47	Q9BQJ4	181 aa		31.8	■■■□□ 2.68
CCZ1B-205	ENST00000464543	MTMR7	Q9Y216	660 aa		31.8	■■■□□ 2.68
CCZ1B-205	ENST00000464543	DIS3	Q9Y2L1	958 aa	Known RBP	31.8	■■■□□ 2.68
CCZ1B-205	ENST00000464543	TOP1	P11387	765 aa	Known RBP	31.79	■■■□□ 2.68
CCZ1B-205	ENST00000464543	PFAS	O15067	1338 aa		31.78	■■■□□ 2.68
CCZ1B-205	ENST00000464543	EVI5	O60447	810 aa		31.78	■■■□□ 2.68
CCZ1B-205	ENST00000464543	PRAMEF19	Q5SWL8	479 aa		31.78	■■■□□ 2.68
CCZ1B-205	ENST00000464543	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	31.78	■■■□□ 2.68
CCZ1B-205	ENST00000464543	DCAF4	Q8WV16	495 aa		31.78	■■■□□ 2.68
CCZ1B-205	ENST00000464543	NR2E3	Q9Y5X4	410 aa		31.78	■■■□□ 2.68
CCZ1B-205	ENST00000464543	COL6A1	P12109	1028 aa		31.77	■■■□□ 2.68
CCZ1B-205	ENST00000464543	ESR2	Q92731	530 aa		31.77	■■■□□ 2.68
CCZ1B-205	ENST00000464543	ZNF536	O15090	1300 aa		31.76	■■■□□ 2.68
CCZ1B-205	ENST00000464543	DNAJC25-GNG10	A0A024R161	153 aa		31.76	■■■□□ 2.67
CCZ1B-205	ENST00000464543	CCDC96	Q2M329	555 aa		31.76	■■■□□ 2.67
CCZ1B-205	ENST00000464543	TINF2	Q9BSI4	451 aa		31.76	■■■□□ 2.67
CCZ1B-205	ENST00000464543	PRR12	Q9ULL5	1215 aa		31.76	■■■□□ 2.67
CCZ1B-205	ENST00000464543	SEPT4	O43236	478 aa		31.75	■■■□□ 2.67
CCZ1B-205	ENST00000464543	CHST13	Q8NET6	341 aa		31.75	■■■□□ 2.67
CCZ1B-205	ENST00000464543	DDX11	Q96FC9	970 aa		31.75	■■■□□ 2.67
CCZ1B-205	ENST00000464543	FBXO40	Q9UH90	709 aa		31.75	■■■□□ 2.67
CCZ1B-205	ENST00000464543	RANBP2	P49792	3224 aa	Known RBP	31.75	■■■□□ 2.67
CCZ1B-205	ENST00000464543	RAD50	Q92878	1312 aa		31.75	■■■□□ 2.67
CCZ1B-205	ENST00000464543	IMMT	Q16891	758 aa	Known RBP	31.74	■■■□□ 2.67
CCZ1B-205	ENST00000464543	AGBL1	Q96MI9	1066 aa		31.74	■■■□□ 2.67
CCZ1B-205	ENST00000464543	TTC14	Q96N46	770 aa		31.74	■■■□□ 2.67
CCZ1B-205	ENST00000464543	HOMER2	Q9NSB8	354 aa		31.74	■■■□□ 2.67
CCZ1B-205	ENST00000464543	NRBP1	Q9UHY1	535 aa		31.74	■■■□□ 2.67
CCZ1B-205	ENST00000464543	CTNNA3	Q9UI47	895 aa		31.74	■■■□□ 2.67
CCZ1B-205	ENST00000464543	COLQ	Q9Y215	455 aa	Predicted RBP	31.74	■■■□□ 2.67
CCZ1B-205	ENST00000464543	CHML	P26374	656 aa		31.73	■■■□□ 2.67
CCZ1B-205	ENST00000464543	SNAP25	P60880	206 aa		31.73	■■■□□ 2.67
CCZ1B-205	ENST00000464543	HABP4	Q5JVS0	413 aa	Known RBP	31.73	■■■□□ 2.67
CCZ1B-205	ENST00000464543	ANO1	Q5XXA6	986 aa		31.73	■■■□□ 2.67
CCZ1B-205	ENST00000464543	ZKSCAN3	Q9BRR0	538 aa		31.73	■■■□□ 2.67
CCZ1B-205	ENST00000464543	SMCHD1	A6NHR9	2005 aa		31.72	■■■□□ 2.67
CCZ1B-205	ENST00000464543	NT5C2	P49902	561 aa		31.72	■■■□□ 2.67
CCZ1B-205	ENST00000464543	TTBK2	Q6IQ55	1244 aa		31.72	■■■□□ 2.67
CCZ1B-205	ENST00000464543	ANKRD35	Q8N283	1001 aa		31.72	■■■□□ 2.67
CCZ1B-205	ENST00000464543		B4E1Z4	1266 aa		31.71	■■■□□ 2.67
CCZ1B-205	ENST00000464543	KDM4A	O75164	1064 aa		31.71	■■■□□ 2.67
CCZ1B-205	ENST00000464543	PDHB	P11177	359 aa		31.71	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms