RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.66■□□□□ 0.26
COL5A1-205ENST00000464187 hCG_1642624A0A1W2PR95 340 aa16.66■□□□□ 0.26
COL5A1-205ENST00000464187 GLTPD2A6NH11 291 aa16.66■□□□□ 0.26
COL5A1-205ENST00000464187 USP17L5A8MUK1 530 aa16.66■□□□□ 0.26
COL5A1-205ENST00000464187 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
COL5A1-205ENST00000464187 ZNF830Q96NB3 372 aaPredicted RBP16.66■□□□□ 0.26
COL5A1-205ENST00000464187 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
COL5A1-205ENST00000464187 PHF20L1A8MW92 1017 aa16.65■□□□□ 0.26
COL5A1-205ENST00000464187 KLRF2D3W0D1 207 aa16.65■□□□□ 0.26
COL5A1-205ENST00000464187 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
COL5A1-205ENST00000464187 CAP2P40123 477 aa16.65■□□□□ 0.26
COL5A1-205ENST00000464187 IQCB1Q15051 598 aa16.65■□□□□ 0.26
COL5A1-205ENST00000464187 PTPAQ15257 358 aa16.65■□□□□ 0.26
COL5A1-205ENST00000464187 PKN1Q16512 942 aa16.65■□□□□ 0.26
COL5A1-205ENST00000464187 PRAMEF18Q5VWM3 479 aa16.65■□□□□ 0.26
COL5A1-205ENST00000464187 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-205ENST00000464187 TTC12Q9H892 705 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-205ENST00000464187 PITPNM2Q9BZ72 1349 aa16.65■□□□□ 0.26
COL5A1-205ENST00000464187 MARCKSP29966 332 aaPredicted RBP16.64■□□□□ 0.25
COL5A1-205ENST00000464187 PPP2R3BQ9Y5P8 575 aa16.64■□□□□ 0.25
COL5A1-205ENST00000464187 A0A087WWV3 80 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 CYTH3O43739 400 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 PPP6R2O75170 966 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 MMP1P03956 469 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 CMA1P23946 247 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 SPC24Q8NBT2 197 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 ERCC4Q92889 916 aaPredicted RBP16.63■□□□□ 0.25
COL5A1-205ENST00000464187 LZTS2Q9BRK4 669 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 FRMPD2Q68DX3 1309 aaPredicted RBP16.63■□□□□ 0.25
COL5A1-205ENST00000464187 RAD21O60216 631 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 ASNSP08243 561 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 PFKFB1P16118 471 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 SLC35G1Q2M3R5 365 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 PLA2G4DQ86XP0 818 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 PIBF1Q8WXW3 757 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 CPVLQ9H3G5 476 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 ANO10Q9NW15 660 aa16.63■□□□□ 0.25
COL5A1-205ENST00000464187 A0A1W2PRG0 241 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 EPHX2P34913 555 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 ZNF75DP51815 510 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 ZNF543Q08ER8 600 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 DCAF15Q66K64 600 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 USP50Q70EL3 339 aaPredicted RBP16.62■□□□□ 0.25
COL5A1-205ENST00000464187 NOSTRINQ8IVI9 506 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 DCPSQ96C86 337 aaKnown RBP16.62■□□□□ 0.25
COL5A1-205ENST00000464187 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 SDF4Q9BRK5 362 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 SPZ1Q9BXG8 430 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.62■□□□□ 0.25
COL5A1-205ENST00000464187 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
COL5A1-205ENST00000464187 BTBD18B2RXH4 712 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 F5H6K3 240 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 ZNF202O95125 648 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 XBP1P17861 261 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 ECE1P42892 770 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 KLRC3Q07444 240 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 PFKFB3Q16875 520 aaPredicted RBP16.61■□□□□ 0.25
COL5A1-205ENST00000464187 DIS3L2Q8IYB7 885 aaKnown RBP16.61■□□□□ 0.25
COL5A1-205ENST00000464187 JMYQ8N9B5 988 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 KCNF1Q9H3M0 494 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 ARHGEF10LQ9HCE6 1279 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 SCG2P13521 617 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 SMARCA1P28370 1054 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 SLC1A4P43007 532 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 SAFBQ15424 915 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL5A1-205ENST00000464187 CCDC96Q2M329 555 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 GPATCH4Q5T3I0 446 aaKnown RBP16.61■□□□□ 0.25
COL5A1-205ENST00000464187 SLFN13Q68D06 897 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 KCTD1Q719H9 257 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 SULF1Q8IWU6 871 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 GMCL1P1Q8NEA9 526 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 ACER1Q8TDN7 264 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 VPS54Q9P1Q0 977 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 KIAA1468Q9P260 1216 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 HPSEQ9Y251 543 aa16.61■□□□□ 0.25
COL5A1-205ENST00000464187 FAM237AA0A1B0GTK4 181 aa16.6■□□□□ 0.25
COL5A1-205ENST00000464187 GOLGA6L6A8MZA4 724 aa16.6■□□□□ 0.25
COL5A1-205ENST00000464187 CTNND1O60716 968 aaKnown RBP16.6■□□□□ 0.25
COL5A1-205ENST00000464187 VEGFAP15692 232 aaPredicted RBP16.6■□□□□ 0.25
COL5A1-205ENST00000464187 SHC4Q6S5L8 630 aa16.6■□□□□ 0.25
COL5A1-205ENST00000464187 DHX40Q8IX18 779 aaKnown RBP16.6■□□□□ 0.25
COL5A1-205ENST00000464187 SHISA4Q96DD7 197 aa16.6■□□□□ 0.25
COL5A1-205ENST00000464187 ZNF341Q9BYN7 854 aa16.6■□□□□ 0.25
COL5A1-205ENST00000464187 TRIM5Q9C035 493 aa16.6■□□□□ 0.25
COL5A1-205ENST00000464187 FOXP1Q9H334 677 aaPredicted RBP16.6■□□□□ 0.25
COL5A1-205ENST00000464187 SYNPO2Q9UMS6 1093 aa16.6■□□□□ 0.25
COL5A1-205ENST00000464187 IQCA1LA6NCM1 817 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 NDUFB10O96000 172 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 TPM3P06753 285 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 INPP5BP32019 993 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 TOB1P50616 345 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-205ENST00000464187 SUPT20HL1Q3ZLR7 823 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 RESP18Q5W5W9 173 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 SARM1Q6SZW1 724 aa16.59■□□□□ 0.25
COL5A1-205ENST00000464187 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-205ENST00000464187 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms