RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GDF15Q99988 308 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 SLC38A10Q9HBR0 1119 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 ORC4O43929 436 aa24.39■■□□□ 1.49
PDLIM4-205ENST00000463615 BMP8BP34820 402 aa24.39■■□□□ 1.49
PDLIM4-205ENST00000463615 OAZ1P54368 228 aa24.39■■□□□ 1.49
PDLIM4-205ENST00000463615 GMCL1Q96IK5 515 aa24.39■■□□□ 1.49
PDLIM4-205ENST00000463615 A0A0D9SFI3 127 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 PLA2G6O60733 806 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 ZBED4O75132 1171 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 BMP3P12645 472 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 NUCB1Q02818 461 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 SLFN13Q68D06 897 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 SNRNP48Q6IEG0 339 aaKnown RBP24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 CHD1LQ86WJ1 897 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 LRRC47Q8N1G4 583 aaKnown RBP24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 MSL3Q8N5Y2 521 aaKnown RBP24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 ARRDC4Q8NCT1 418 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 FAM227BQ96M60 508 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 TINF2Q9BSI4 451 aa24.38■■□□□ 1.49
PDLIM4-205ENST00000463615 IGHDP01880 384 aa24.37■■□□□ 1.49
PDLIM4-205ENST00000463615 LRRC26Q2I0M4 334 aa24.37■■□□□ 1.49
PDLIM4-205ENST00000463615 EXOC6Q8TAG9 804 aa24.37■■□□□ 1.49
PDLIM4-205ENST00000463615 IL17RBQ9NRM6 502 aa24.37■■□□□ 1.49
PDLIM4-205ENST00000463615 RIPK3Q9Y572 518 aa24.37■■□□□ 1.49
PDLIM4-205ENST00000463615 TACC3Q9Y6A5 838 aa24.37■■□□□ 1.49
PDLIM4-205ENST00000463615 DNAJC25-GNG10A0A024R161 153 aa24.36■■□□□ 1.49
PDLIM4-205ENST00000463615 FGAP02671 866 aa24.36■■□□□ 1.49
PDLIM4-205ENST00000463615 PGK2P07205 417 aa24.36■■□□□ 1.49
PDLIM4-205ENST00000463615 CTDSPL2Q05D32 466 aa24.36■■□□□ 1.49
PDLIM4-205ENST00000463615 PLEKHM2Q8IWE5 1019 aa24.36■■□□□ 1.49
PDLIM4-205ENST00000463615 TSPY2A6NKD2 308 aa24.35■■□□□ 1.49
PDLIM4-205ENST00000463615 MAMDC4Q6UXC1 1216 aa24.35■■□□□ 1.49
PDLIM4-205ENST00000463615 FAM160B2Q86V87 743 aa24.35■■□□□ 1.49
PDLIM4-205ENST00000463615 FBXO40Q9UH90 709 aa24.35■■□□□ 1.49
PDLIM4-205ENST00000463615 PLXNA1Q9UIW2 1896 aa24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 HSPD1P10809 573 aaKnown RBP24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 NMIQ13287 307 aaPredicted RBP24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 PRAMEF19Q5SWL8 479 aa24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 ZNF467Q7Z7K2 595 aaPredicted RBP24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 CHST13Q8NET6 341 aa24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 CHURC1Q8WUH1 139 aa24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 STAG1Q8WVM7 1258 aa24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 KIFC2Q96AC6 838 aa24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 INCENPQ9NQS7 918 aa24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 ZMYND8Q9ULU4 1186 aaPredicted RBP24.34■■□□□ 1.49
PDLIM4-205ENST00000463615 STAT2P52630 851 aa24.33■■□□□ 1.49
PDLIM4-205ENST00000463615 B4GALNT3Q6L9W6 998 aa24.33■■□□□ 1.49
PDLIM4-205ENST00000463615 ZNF589Q86UQ0 364 aaPredicted RBP24.33■■□□□ 1.49
PDLIM4-205ENST00000463615 SENP6Q9GZR1 1112 aaPredicted RBP24.33■■□□□ 1.49
PDLIM4-205ENST00000463615 TCP11L1Q9NUJ3 509 aa24.33■■□□□ 1.49
PDLIM4-205ENST00000463615 CCDC171Q6TFL3 1326 aa24.33■■□□□ 1.48
PDLIM4-205ENST00000463615 SYNGAP1Q96PV0 1343 aa24.33■■□□□ 1.48
PDLIM4-205ENST00000463615 TRIM6-TRIM34B2RNG4 842 aa24.32■■□□□ 1.48
PDLIM4-205ENST00000463615 TMEM232C9JQI7 657 aa24.32■■□□□ 1.48
PDLIM4-205ENST00000463615 ZNF865P0CJ78 1059 aaPredicted RBP24.32■■□□□ 1.48
PDLIM4-205ENST00000463615 PCP11498 1178 aaKnown RBP24.32■■□□□ 1.48
PDLIM4-205ENST00000463615 SLC1A4P43007 532 aa24.32■■□□□ 1.48
PDLIM4-205ENST00000463615 CPXCR1Q8N123 301 aa24.32■■□□□ 1.48
PDLIM4-205ENST00000463615 RAVER2Q9HCJ3 691 aaKnown RBP24.32■■□□□ 1.48
PDLIM4-205ENST00000463615 STX8Q9UNK0 236 aa24.32■■□□□ 1.48
PDLIM4-205ENST00000463615 CTDP1Q9Y5B0 961 aaPredicted RBP24.32■■□□□ 1.48
PDLIM4-205ENST00000463615 RANBP6O60518 1105 aaKnown RBP24.31■■□□□ 1.48
PDLIM4-205ENST00000463615 SDSP20132 328 aa24.31■■□□□ 1.48
PDLIM4-205ENST00000463615 MFAP1P55081 439 aaKnown RBP24.31■■□□□ 1.48
PDLIM4-205ENST00000463615 GJC2Q5T442 439 aaPredicted RBP24.31■■□□□ 1.48
PDLIM4-205ENST00000463615 RCSD1Q6JBY9 416 aa24.31■■□□□ 1.48
PDLIM4-205ENST00000463615 DDX11Q96FC9 970 aa24.31■■□□□ 1.48
PDLIM4-205ENST00000463615 KBTBD13C9JR72 458 aa24.3■■□□□ 1.48
PDLIM4-205ENST00000463615 NMT2O60551 498 aa24.3■■□□□ 1.48
PDLIM4-205ENST00000463615 SYN1P17600 705 aa24.3■■□□□ 1.48
PDLIM4-205ENST00000463615 MCCP23508 829 aa24.3■■□□□ 1.48
PDLIM4-205ENST00000463615 MAGEA10P43363 369 aaPredicted RBP24.3■■□□□ 1.48
PDLIM4-205ENST00000463615 SNX17Q15036 470 aa24.3■■□□□ 1.48
PDLIM4-205ENST00000463615 LRRC41Q15345 812 aa24.3■■□□□ 1.48
PDLIM4-205ENST00000463615 ZNF536O15090 1300 aa24.3■■□□□ 1.48
PDLIM4-205ENST00000463615 SMCHD1A6NHR9 2005 aa24.29■■□□□ 1.48
PDLIM4-205ENST00000463615 RARBP10826 455 aa24.29■■□□□ 1.48
PDLIM4-205ENST00000463615 AKR1A1P14550 325 aa24.29■■□□□ 1.48
PDLIM4-205ENST00000463615 NT5C2P49902 561 aa24.29■■□□□ 1.48
PDLIM4-205ENST00000463615 TKFCQ3LXA3 575 aa24.29■■□□□ 1.48
PDLIM4-205ENST00000463615 C1orf53Q5VUE5 145 aa24.29■■□□□ 1.48
PDLIM4-205ENST00000463615 RILPL2Q969X0 211 aa24.29■■□□□ 1.48
PDLIM4-205ENST00000463615 CNPY2Q9Y2B0 182 aa24.29■■□□□ 1.48
PDLIM4-205ENST00000463615 SNAI1O95863 264 aaPredicted RBP24.28■■□□□ 1.48
PDLIM4-205ENST00000463615 TAL1P17542 331 aaPredicted RBP24.28■■□□□ 1.48
PDLIM4-205ENST00000463615 ANO1Q5XXA6 986 aa24.28■■□□□ 1.48
PDLIM4-205ENST00000463615 DCAF4Q8WV16 495 aa24.28■■□□□ 1.48
PDLIM4-205ENST00000463615 FGD4Q96M96 766 aa24.28■■□□□ 1.48
PDLIM4-205ENST00000463615 PHF24Q9UPV7 400 aa24.28■■□□□ 1.48
PDLIM4-205ENST00000463615 BTNL9Q6UXG8 535 aa24.27■■□□□ 1.48
PDLIM4-205ENST00000463615 SLC39A5Q6ZMH5 540 aa24.27■■□□□ 1.48
PDLIM4-205ENST00000463615 ANKRD35Q8N283 1001 aa24.27■■□□□ 1.48
PDLIM4-205ENST00000463615 ACAD9Q9H845 621 aa24.27■■□□□ 1.48
PDLIM4-205ENST00000463615 XPNPEP3Q9NQH7 507 aa24.27■■□□□ 1.48
PDLIM4-205ENST00000463615 SZT2Q5T011 3432 aa24.26■■□□□ 1.47
PDLIM4-205ENST00000463615 HIP1O00291 1037 aa24.26■■□□□ 1.47
PDLIM4-205ENST00000463615 TOP1P11387 765 aaKnown RBP24.26■■□□□ 1.47
PDLIM4-205ENST00000463615 RTP1P59025 263 aa24.26■■□□□ 1.47
PDLIM4-205ENST00000463615 AKNAD1Q5T1N1 836 aa24.26■■□□□ 1.47
PDLIM4-205ENST00000463615 KCTD1Q719H9 257 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms