RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SHMT1P34896 483 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 ZNF165P49910 485 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 AKNAD1Q5T1N1 836 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 SARM1Q6SZW1 724 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 AMOTL1Q8IY63 956 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 GOLPH3LQ9H4A5 285 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 AS3MTQ9HBK9 375 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 SPTLC3Q9NUV7 552 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 SWAP70Q9UH65 585 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 PCDHA7Q9UN72 937 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 MYH1P12882 1939 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 NEDD4P46934 1319 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 B4E1Z4 1266 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 ZBTB43O43298 467 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 CYP2D6P10635 497 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 ME1P48163 572 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 SPP2Q13103 211 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 CRHR2Q13324 411 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 IQCB1Q15051 598 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 NTRK3Q16288 839 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 SH3D19Q5HYK7 790 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 GPAT2Q6NUI2 795 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 PLA2G4DQ86XP0 818 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 FMR1NBQ8N0W7 255 aaPredicted RBP11.39□□□□□ -0.59
PTPRD-207ENST00000463477 TMTC2Q8N394 836 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 FSIP1Q8NA03 581 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 RNF41Q9H4P4 317 aaPredicted RBP11.39□□□□□ -0.59
PTPRD-207ENST00000463477 ZFYVE28Q9HCC9 887 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.39□□□□□ -0.59
PTPRD-207ENST00000463477 ARPP21Q9UBL0 812 aaPredicted RBP11.39□□□□□ -0.59
PTPRD-207ENST00000463477 ANAPC4Q9UJX5 808 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 ZBTB21Q9ULJ3 1066 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 SIPA1L1O43166 1804 aa11.39□□□□□ -0.59
PTPRD-207ENST00000463477 BAZ2AQ9UIF9 1905 aaKnown RBP11.38□□□□□ -0.59
PTPRD-207ENST00000463477 TRIM75PA6NK02 468 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 C19orf81C9J6K1 198 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 SPTLC2O15270 562 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 GDF11O95390 407 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 GH2P01242 217 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 PCP11498 1178 aaKnown RBP11.38□□□□□ -0.59
PTPRD-207ENST00000463477 GUCY1B3Q02153 619 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 EVX2Q03828 476 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 STK38Q15208 465 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 TAF1CQ15572 869 aaPredicted RBP11.38□□□□□ -0.59
PTPRD-207ENST00000463477 ABCB5Q2M3G0 1257 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 CCDC84Q86UT8 332 aaPredicted RBP11.38□□□□□ -0.59
PTPRD-207ENST00000463477 LUZP1Q86V48 1076 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
PTPRD-207ENST00000463477 ZNF296Q8WUU4 475 aaPredicted RBP11.38□□□□□ -0.59
PTPRD-207ENST00000463477 WASF1Q92558 559 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 FTOQ9C0B1 505 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRD-207ENST00000463477 CABP5Q9NP86 173 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 ANO10Q9NW15 660 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 SLC45A1Q9Y2W3 748 aa11.38□□□□□ -0.59
PTPRD-207ENST00000463477 FAM237AA0A1B0GTK4 181 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 PDHXO00330 501 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 TLR2O60603 784 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 FKTNO75072 461 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 PPP6R2O75170 966 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 IFNAR1P17181 557 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 U2AF2P26368 475 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPRD-207ENST00000463477 CDK8P49336 464 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 BACE1P56817 501 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 CEBPZQ03701 1054 aaKnown RBP11.37□□□□□ -0.59
PTPRD-207ENST00000463477 SART3Q15020 963 aaKnown RBP11.37□□□□□ -0.59
PTPRD-207ENST00000463477 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 TMEM67Q5HYA8 995 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 ANO1Q5XXA6 986 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 SYNE3Q6ZMZ3 975 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 MFSD6Q6ZSS7 791 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 C16orf86Q6ZW13 317 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 DYNLL2Q96FJ2 89 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 CCDC17Q96LX7 622 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 TIGD1Q96MW7 591 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 ALG1Q9BT22 464 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
PTPRD-207ENST00000463477 ZSWIM5Q9P217 1185 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 CASP8AP2Q9UKL3 1982 aa11.37□□□□□ -0.59
PTPRD-207ENST00000463477 CYP2D7A0A087X1C5 515 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 USP17L10C9JJH3 530 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 SMIM22K7EJ46 135 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 CMA1P23946 247 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 ZNF75DP51815 510 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 FOSBP53539 338 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 SLC39A14Q15043 492 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 SHROOM1Q2M3G4 852 aaPredicted RBP11.36□□□□□ -0.59
PTPRD-207ENST00000463477 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 BPIFA3Q9BQP9 254 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 DNAJC25Q9H1X3 360 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 AGTPBP1Q9UPW5 1226 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 CLIC4Q9Y696 253 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 DOCK1Q14185 1865 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 GOLGA8AA7E2F4 631 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 KIF28PB7ZC32 967 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 IFIT3O14879 490 aaKnown RBP11.36□□□□□ -0.59
PTPRD-207ENST00000463477 FMNL1O95466 1100 aaPredicted RBP11.36□□□□□ -0.59
PTPRD-207ENST00000463477 CDC27P30260 824 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 GUCY1A2P33402 732 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 TDO2P48775 406 aa11.36□□□□□ -0.59
PTPRD-207ENST00000463477 HMGCS2P54868 508 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms