RNA–Protein interactions for RNA: ENST00000463238.1

FAM53A-203, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-203ENST00000463238 ACLYP53396 1101 aa17.91■□□□□ 0.46
FAM53A-203ENST00000463238 SBK1Q52WX2 424 aa17.91■□□□□ 0.46
FAM53A-203ENST00000463238 SNRNP48Q6IEG0 339 aaKnown RBP17.91■□□□□ 0.46
FAM53A-203ENST00000463238 GIMAP6Q6P9H5 292 aa17.91■□□□□ 0.46
FAM53A-203ENST00000463238 PRPF38AQ8NAV1 312 aaKnown RBP17.91■□□□□ 0.46
FAM53A-203ENST00000463238 MYLIPQ8WY64 445 aa17.91■□□□□ 0.46
FAM53A-203ENST00000463238 TTYH1Q9H313 450 aaPredicted RBP17.91■□□□□ 0.46
FAM53A-203ENST00000463238 ZNF287Q9HBT7 754 aa17.91■□□□□ 0.46
FAM53A-203ENST00000463238 NYAP2Q9P242 653 aa17.91■□□□□ 0.46
FAM53A-203ENST00000463238 COG6Q9Y2V7 657 aa17.91■□□□□ 0.46
FAM53A-203ENST00000463238 ZNFX1Q9P2E3 1918 aaKnown RBP17.91■□□□□ 0.46
FAM53A-203ENST00000463238 MROH7Q68CQ1 1323 aa17.91■□□□□ 0.46
FAM53A-203ENST00000463238 SMIM22K7EJ46 135 aa17.9■□□□□ 0.46
FAM53A-203ENST00000463238 ZBED4O75132 1171 aa17.9■□□□□ 0.46
FAM53A-203ENST00000463238 CCDC174Q6PII3 467 aa17.9■□□□□ 0.46
FAM53A-203ENST00000463238 MAMDC4Q6UXC1 1216 aa17.9■□□□□ 0.46
FAM53A-203ENST00000463238 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
FAM53A-203ENST00000463238 LRRCC1Q9C099 1032 aa17.9■□□□□ 0.46
FAM53A-203ENST00000463238 PUS7LQ9H0K6 701 aaKnown RBP17.9■□□□□ 0.46
FAM53A-203ENST00000463238 SPC25Q9HBM1 224 aa17.9■□□□□ 0.46
FAM53A-203ENST00000463238 ZHX1Q9UKY1 873 aaPredicted RBP17.9■□□□□ 0.46
FAM53A-203ENST00000463238 COL11A1P12107 1806 aaPredicted RBP17.9■□□□□ 0.46
FAM53A-203ENST00000463238 SYNRGQ9UMZ2 1314 aa17.9■□□□□ 0.46
FAM53A-203ENST00000463238 PLXNA1Q9UIW2 1896 aa17.89■□□□□ 0.45
FAM53A-203ENST00000463238 F5H6K3 240 aa17.89■□□□□ 0.45
FAM53A-203ENST00000463238 ATP2A1O14983 1001 aa17.89■□□□□ 0.45
FAM53A-203ENST00000463238 DUSP11O75319 330 aaKnown RBP17.89■□□□□ 0.45
FAM53A-203ENST00000463238 ITGB8P26012 769 aa17.89■□□□□ 0.45
FAM53A-203ENST00000463238 KLRC3Q07444 240 aa17.89■□□□□ 0.45
FAM53A-203ENST00000463238 GLT1D1Q96MS3 346 aa17.89■□□□□ 0.45
FAM53A-203ENST00000463238 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.89■□□□□ 0.45
FAM53A-203ENST00000463238 FBXO40Q9UH90 709 aa17.89■□□□□ 0.45
FAM53A-203ENST00000463238 SMCHD1A6NHR9 2005 aa17.89■□□□□ 0.45
FAM53A-203ENST00000463238 PRUNE2Q8WUY3 3088 aa17.89■□□□□ 0.45
FAM53A-203ENST00000463238 VCANP13611 3396 aa17.88■□□□□ 0.45
FAM53A-203ENST00000463238 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.88■□□□□ 0.45
FAM53A-203ENST00000463238 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.88■□□□□ 0.45
FAM53A-203ENST00000463238 NDUFB10O96000 172 aa17.88■□□□□ 0.45
FAM53A-203ENST00000463238 RASA1P20936 1047 aa17.88■□□□□ 0.45
FAM53A-203ENST00000463238 FAAP100Q0VG06 881 aa17.88■□□□□ 0.45
FAM53A-203ENST00000463238 PCSK9Q8NBP7 692 aaKnown RBP17.88■□□□□ 0.45
FAM53A-203ENST00000463238 KLHDC9Q8NEP7 349 aa17.88■□□□□ 0.45
FAM53A-203ENST00000463238 SYMPKQ92797 1274 aaKnown RBP17.88■□□□□ 0.45
FAM53A-203ENST00000463238 LENG1Q96BZ8 264 aaPredicted RBP17.88■□□□□ 0.45
FAM53A-203ENST00000463238 GPATCH3Q96I76 525 aa17.88■□□□□ 0.45
FAM53A-203ENST00000463238 STRBPQ96SI9 672 aaKnown RBP17.88■□□□□ 0.45
FAM53A-203ENST00000463238 NUP88Q99567 741 aaPredicted RBP17.88■□□□□ 0.45
FAM53A-203ENST00000463238 SYNPO2Q9UMS6 1093 aa17.88■□□□□ 0.45
FAM53A-203ENST00000463238 ELP1O95163 1332 aa17.88■□□□□ 0.45
FAM53A-203ENST00000463238 DNAJC25-GNG10A0A024R161 153 aa17.87■□□□□ 0.45
FAM53A-203ENST00000463238 MINDY4BA8MYZ0 360 aa17.87■□□□□ 0.45
FAM53A-203ENST00000463238 TIMP1P01033 207 aa17.87■□□□□ 0.45
FAM53A-203ENST00000463238 CHGBP05060 677 aa17.87■□□□□ 0.45
FAM53A-203ENST00000463238 CST5P28325 142 aaPredicted RBP17.87■□□□□ 0.45
FAM53A-203ENST00000463238 EPHB4P54760 987 aa17.87■□□□□ 0.45
FAM53A-203ENST00000463238 KCNA10Q16322 511 aa17.87■□□□□ 0.45
FAM53A-203ENST00000463238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.87■□□□□ 0.45
FAM53A-203ENST00000463238 ABHD16BQ9H3Z7 469 aa17.87■□□□□ 0.45
FAM53A-203ENST00000463238 ECHDC1Q9NTX5 307 aa17.87■□□□□ 0.45
FAM53A-203ENST00000463238 MYH7P12883 1935 aa17.87■□□□□ 0.45
FAM53A-203ENST00000463238 SNAI1O95863 264 aaPredicted RBP17.86■□□□□ 0.45
FAM53A-203ENST00000463238 GNAT2P19087 354 aa17.86■□□□□ 0.45
FAM53A-203ENST00000463238 OAZ1P54368 228 aa17.86■□□□□ 0.45
FAM53A-203ENST00000463238 PPIGQ13427 754 aaKnown RBP eCLIP17.86■□□□□ 0.45
FAM53A-203ENST00000463238 ACVR2BQ13705 512 aa17.86■□□□□ 0.45
FAM53A-203ENST00000463238 ZNF444Q8N0Y2 327 aaPredicted RBP17.86■□□□□ 0.45
FAM53A-203ENST00000463238 CPXCR1Q8N123 301 aa17.86■□□□□ 0.45
FAM53A-203ENST00000463238 ANKRD35Q8N283 1001 aa17.86■□□□□ 0.45
FAM53A-203ENST00000463238 CHST13Q8NET6 341 aa17.86■□□□□ 0.45
FAM53A-203ENST00000463238 CLIP2Q9UDT6 1046 aa17.86■□□□□ 0.45
FAM53A-203ENST00000463238 FEM1BQ9UK73 627 aa17.86■□□□□ 0.45
FAM53A-203ENST00000463238 CDH23Q9H251 3354 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 GSG1L2A8MUP6 293 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 ZFYP08048 801 aaPredicted RBP17.85■□□□□ 0.45
FAM53A-203ENST00000463238 C6orf222P0C671 652 aaPredicted RBP17.85■□□□□ 0.45
FAM53A-203ENST00000463238 FDX1P10109 184 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 DNAJB2P25686 324 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 SLC4A3P48751 1232 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 LRRFIP1Q32MZ4 808 aaKnown RBP17.85■□□□□ 0.45
FAM53A-203ENST00000463238 CCSAPQ6IQ19 270 aaPredicted RBP17.85■□□□□ 0.45
FAM53A-203ENST00000463238 MFSD5Q6N075 450 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 KBTBD3Q8NAB2 608 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 APPBP2Q92624 585 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 KIFC2Q96AC6 838 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 VTI1AQ96AJ9 217 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 SLC38A10Q9HBR0 1119 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.85■□□□□ 0.45
FAM53A-203ENST00000463238 TBX21Q9UL17 535 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 RIPK3Q9Y572 518 aa17.85■□□□□ 0.45
FAM53A-203ENST00000463238 GREB1LQ9C091 1923 aaPredicted RBP17.84■□□□□ 0.45
FAM53A-203ENST00000463238 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
FAM53A-203ENST00000463238 TLR3O15455 904 aaKnown RBP17.84■□□□□ 0.45
FAM53A-203ENST00000463238 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
FAM53A-203ENST00000463238 TDO2P48775 406 aa17.84■□□□□ 0.45
FAM53A-203ENST00000463238 STK11IPQ8N1F8 1099 aa17.84■□□□□ 0.45
FAM53A-203ENST00000463238 GMCL1P1Q8NEA9 526 aa17.84■□□□□ 0.45
FAM53A-203ENST00000463238 MKL1Q969V6 931 aa17.84■□□□□ 0.45
FAM53A-203ENST00000463238 SPTBN5Q9NRC6 3674 aaKnown RBP17.83■□□□□ 0.45
FAM53A-203ENST00000463238 IGKV6D-41A0A0C4DH26 115 aa17.83■□□□□ 0.44
FAM53A-203ENST00000463238 TTLL1O95922 423 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms