RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 ZNFX1Q9P2E3 1918 aaKnown RBP9.74□□□□□ -0.85
GARNL3-212ENST00000463005 MYO5AQ9Y4I1 1855 aaKnown RBP9.73□□□□□ -0.85
GARNL3-212ENST00000463005 SRGAP3O43295 1099 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 STRNO43815 780 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 PEX10O60683 326 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 CNGA1P29973 690 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 JAG1P78504 1218 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 SMAD3P84022 425 aaKnown RBP9.73□□□□□ -0.85
GARNL3-212ENST00000463005 SHHQ15465 462 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 LBX2Q6XYB7 198 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 CATSPERGQ6ZRH7 1159 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 NOB1Q9ULX3 412 aaKnown RBP9.73□□□□□ -0.85
GARNL3-212ENST00000463005 PCDHB3Q9Y5E6 796 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 SMCHD1A6NHR9 2005 aa9.73□□□□□ -0.85
GARNL3-212ENST00000463005 GDF11O95390 407 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 MCAMP43121 646 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 RTP1P59025 263 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 COPS2P61201 443 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 G3BP1Q13283 466 aaKnown RBP eCLIP9.72□□□□□ -0.85
GARNL3-212ENST00000463005 WDR78Q5VTH9 848 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 SLC39A5Q6ZMH5 540 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 RETREG3Q86VR2 466 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 CERS3Q8IU89 383 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 MAPKAPK5Q8IW41 473 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 SCUBE3Q8IX30 993 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 MAFAQ8NHW3 353 aaPredicted RBP9.72□□□□□ -0.85
GARNL3-212ENST00000463005 MEIS3Q99687 375 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 DNAJC18Q9H819 358 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 FLRT1Q9NZU1 646 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 RCAN3Q9UKA8 241 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 PALD1Q9ULE6 856 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 FLT1P17948 1338 aa9.72□□□□□ -0.85
GARNL3-212ENST00000463005 TMEM265A0A087WTH1 108 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 KBTBD13C9JR72 458 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 CNMDO75829 334 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 IGHA2P01877 340 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 GRB14Q14449 540 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 CCDC158Q5M9N0 1113 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 C1orf53Q5VUE5 145 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 OLFML2BQ68BL8 750 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 TATDN1Q6P1N9 297 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 PI16Q6UXB8 463 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 DPP9Q86TI2 863 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 TRMT2AQ8IZ69 625 aaKnown RBP9.71□□□□□ -0.86
GARNL3-212ENST00000463005 NPLOC4Q8TAT6 608 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 ARHGAP45Q92619 1136 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 FEZ1Q99689 392 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 KIAA1683Q9H0B3 1180 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 GPR108Q9NPR9 543 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 SLC5A4Q9NY91 659 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 HOXC10Q9NYD6 342 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 ATP11BQ9Y2G3 1177 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.86
GARNL3-212ENST00000463005 POTEMA6NI47 508 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 SEPT4O43236 478 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 GH2P01242 217 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 NEFLP07196 543 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 CYBAP13498 195 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 CYP2C19P33261 490 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 SNX17Q15036 470 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 GJC2Q5T442 439 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-212ENST00000463005 TMED8Q6PL24 325 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-212ENST00000463005 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 TTC6Q86TZ1 520 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 ZNF512BQ96KM6 892 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-212ENST00000463005 CABP5Q9NP86 173 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 TACC3Q9Y6A5 838 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-212ENST00000463005 UNC80Q8N2C7 3258 aa9.7□□□□□ -0.86
GARNL3-212ENST00000463005 TLL1O43897 1013 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 VAC14Q08AM6 782 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 COG2Q14746 738 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 CERKLQ49MI3 558 aaPredicted RBP9.69□□□□□ -0.86
GARNL3-212ENST00000463005 TTC39AQ5SRH9 613 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 C9orf50Q5SZB4 431 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 BRICD5Q6PL45 260 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 SHCBP1Q8NEM2 672 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 TRPV1Q8NER1 839 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 MYLIPQ8WY64 445 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 BADQ92934 168 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 THAP11Q96EK4 314 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 EHD4Q9H223 541 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 PRDM9Q9NQV7 894 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 BTBD7Q9P203 1132 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 SERPINB13Q9UIV8 391 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 ZNF236Q9UL36 1845 aa9.69□□□□□ -0.86
GARNL3-212ENST00000463005 GNAI2P04899 355 aa9.68□□□□□ -0.86
GARNL3-212ENST00000463005 CYP2E1P05181 493 aaPredicted RBP9.68□□□□□ -0.86
GARNL3-212ENST00000463005 FOSL2P15408 326 aa9.68□□□□□ -0.86
GARNL3-212ENST00000463005 VCAM1P19320 739 aa9.68□□□□□ -0.86
GARNL3-212ENST00000463005 USP5P45974 858 aa9.68□□□□□ -0.86
GARNL3-212ENST00000463005 RAB3GAP1Q15042 981 aa9.68□□□□□ -0.86
GARNL3-212ENST00000463005 ZYXQ15942 572 aaKnown RBP9.68□□□□□ -0.86
GARNL3-212ENST00000463005 ABCB5Q2M3G0 1257 aa9.68□□□□□ -0.86
GARNL3-212ENST00000463005 SHROOM1Q2M3G4 852 aaPredicted RBP9.68□□□□□ -0.86
GARNL3-212ENST00000463005 ADGRA1Q86SQ6 560 aa9.68□□□□□ -0.86
GARNL3-212ENST00000463005 FRAT1Q92837 279 aaPredicted RBP9.68□□□□□ -0.86
GARNL3-212ENST00000463005 USB1Q9BQ65 265 aaKnown RBP9.68□□□□□ -0.86
GARNL3-212ENST00000463005 TTYH1Q9H313 450 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms