RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 CRACR2AQ9BSW2 395 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 NUP58Q9BVL2 599 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 TRIM34Q9BYJ4 488 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 VPS16Q9H269 839 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 BLZF1Q9H2G9 400 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 THAP9Q9H5L6 903 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 EFCC1Q9HA90 598 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 MAGEF1Q9HAY2 307 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 IGSF5Q9NSI5 407 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 EXOC1Q9NV70 894 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 ASAP1Q9ULH1 1129 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 GUCA1BQ9UMX6 200 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 LUC7L2Q9Y383 392 aaKnown RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 TACC3Q9Y6A5 838 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SAR1BQ9Y6B6 198 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 EPN1Q9Y6I3 576 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 V9GY48 417 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PAPPAQ13219 1627 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 XDHP47989 1333 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SOS2Q07890 1332 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PDS5AQ29RF7 1337 aaKnown RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 CNTNAP5Q8WYK1 1306 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 RGPD2P0DJD1 1756 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 SCN11AQ9UI33 1791 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 ADAMTSL3P82987 1691 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 A0A0U1RQJ8 604 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 hCG_1642624A0A1W2PR95 340 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 BICDL2A1A5D9 508 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 EIF3CLB5ME19 914 aaKnown RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 MYO1CO00159 1063 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 LAD1O00515 517 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 TRIM66O15016 1216 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 ORC4O43929 436 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 USO1O60763 962 aaKnown RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 PPFIA4O75335 1185 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 TACC1O75410 805 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 PRDM1O75626 825 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 CASP1P29466 404 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 MCM7P33993 719 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 IL6STP40189 918 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 MAGEA9P43362 315 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 GNAQP50148 359 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 DNM2P50570 870 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 BCAMP50895 628 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 EIF5P55010 431 aaKnown RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 HERVK_113P62684 666 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 KCNB1Q14721 858 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 SPA17Q15506 151 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 MEA1Q16626 185 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 PFKFB3Q16875 520 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 TTC31Q49AM3 519 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC178Q5BJE1 867 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 CAVIN4Q5BKX8 364 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC122Q5T0U0 273 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 PAPD7Q5XG87 772 aaKnown RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 NCAPH2Q6IBW4 605 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 DTHD1Q6ZMT9 781 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 PIK3AP1Q6ZUJ8 805 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 EFCAB13Q8IY85 973 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 C10orf67Q8IYJ2 551 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 ZNF34Q8IZ26 560 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 BLIDQ8IZY5 108 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 ADSSL1Q8N142 457 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 PLCD3Q8N3E9 789 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 FNBP4Q8N3X1 1017 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 NOA1Q8NC60 698 aaKnown RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 FAM76AQ8TAV0 307 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 COG1Q8WTW3 980 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 SDR42E1Q8WUS8 393 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 ATRIPQ8WXE1 791 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 PPM1EQ8WY54 764 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 SECISBP2LQ93073 1101 aaKnown RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 DHTKD1Q96HY7 919 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 PCMTD1Q96MG8 357 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 RUFY1Q96T51 708 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 EIF3CQ99613 913 aaKnown RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 CRNKL1Q9BZJ0 848 aaKnown RBP3.94□□□□□ -1.78
COL8A1-204ENST00000462604 FAM117AQ9C073 453 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 CUEDC2Q9H467 287 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 KAT14Q9H8E8 782 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 FAM204AQ9H8W3 233 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 SH3GLB2Q9NR46 395 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 DISC1Q9NRI5 854 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 ABCF2Q9UG63 623 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 HPCAL4Q9UM19 191 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 CAPN11Q9UMQ6 739 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 ZBTB1Q9Y2K1 713 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 GDAQ9Y2T3 454 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 C4AP0C0L4 1744 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 C4BP0C0L5 1744 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 NUP188Q5SRE5 1749 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 ZNF804BA4D1E1 1349 aa3.94□□□□□ -1.78
COL8A1-204ENST00000462604 NWD2Q9ULI1 1742 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC194A0A1B0GVG4 234 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 A0A1W2PQJ5 194 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 TTC26A0AVF1 554 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 SHTN1A0MZ66 631 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 GOLGA6BA6NDN3 693 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 TSPY2A6NKD2 308 aa3.93□□□□□ -1.78
COL8A1-204ENST00000462604 NUTM2BA6NNL0 878 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms