RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 IGKV6D-41A0A0C4DH26 115 aa17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 ATP2B2Q01814 1243 aa17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 PABPC4Q13310 644 aaKnown RBP eCLIP17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 TREML2Q5T2D2 321 aa17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 TRIM22Q8IYM9 498 aa17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 NSUN7Q8NE18 718 aaKnown RBP17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 SMARCC2Q8TAQ2 1214 aa17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 DDX11Q96FC9 970 aa17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 ZNF333Q96JL9 665 aa17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 MAP3K14Q99558 947 aa17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 ZBTB21Q9ULJ3 1066 aa17.63■□□□□ 0.41
TMEM39A-203ENST00000461654 GDF11O95390 407 aa17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 FMNL1O95466 1100 aaPredicted RBP17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 OSBPP22059 807 aa17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 HOXA7P31268 230 aaPredicted RBP17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 ADD1P35611 737 aaKnown RBP17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 NOVP48745 357 aa17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 GNAQP50148 359 aa17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 HMGCS2P54868 508 aa17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 FCGRTP55899 365 aa17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 AKAP17AQ02040 695 aaKnown RBP17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 TROAPQ12815 778 aa17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 SLC9C1Q4G0N8 1177 aa17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 LARP1BQ659C4 914 aaKnown RBP17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 SMCR8Q8TEV9 937 aaPredicted RBP17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 CLIP2Q9UDT6 1046 aa17.62■□□□□ 0.41
TMEM39A-203ENST00000461654 USP17L10C9JJH3 530 aa17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 JAK2O60674 1132 aa17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 GH2P01242 217 aa17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 CDC27P30260 824 aa17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 GCLCP48506 637 aaPredicted RBP17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 ICA1Q05084 483 aa17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 WASF1Q92558 559 aa17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 NYAP2Q9P242 653 aa17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 ATAD5Q96QE3 1844 aa17.61■□□□□ 0.41
TMEM39A-203ENST00000461654 CTDNEP1O95476 244 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 IFNAR1P17181 557 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 MTMR2Q13614 643 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 GRM4Q14833 912 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 SEPT2Q15019 361 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 FAM110CQ1W6H9 321 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 LZTS2Q9BRK4 669 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 ARHGEF10LQ9HCE6 1279 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 TMOD4Q9NZQ9 345 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 ORC3Q9UBD5 711 aaPredicted RBP17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 LOC285556D6RIA3 1793 aa17.6■□□□□ 0.41
TMEM39A-203ENST00000461654 MYH8P13535 1937 aa17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 POTEFA5A3E0 1075 aa17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 H3BQV1 296 aa17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 STX6O43752 255 aa17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 PARP1P09874 1014 aaKnown RBP17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 EEF2P13639 858 aaKnown RBP17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 SYT1P21579 422 aa17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 SHROOM1Q2M3G4 852 aaPredicted RBP17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 ASCC2Q9H1I8 757 aaPredicted RBP17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 SH2D4AQ9H788 454 aa17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 MTMR7Q9Y216 660 aa17.59■□□□□ 0.41
TMEM39A-203ENST00000461654 HTTP42858 3142 aa17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 MYPNQ86TC9 1320 aa17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 STK36Q9NRP7 1315 aa17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 VPS37CA5D8V6 355 aaPredicted RBP17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 LRRC47Q8N1G4 583 aaKnown RBP17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 MKL1Q969V6 931 aa17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 C12orf42Q96LP6 360 aa17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 TMEM106CQ9BVX2 250 aa17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 SLC26A6Q9BXS9 759 aa17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 RBM27Q9P2N5 1060 aaKnown RBP17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 SYNPO2Q9UMS6 1093 aa17.58■□□□□ 0.4
TMEM39A-203ENST00000461654 ZSWIM8A7E2V4 1837 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 IRF5Q13568 498 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 TRIM29Q14134 588 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 NTRK3Q16288 839 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 ASPRV1Q53RT3 343 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 USP17L2Q6R6M4 530 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 TMTC3Q6ZXV5 915 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 CLEC10AQ8IUN9 316 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 ANKRD13CQ8N6S4 541 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 RAET1EQ8TD07 263 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 SH3TC2Q8TF17 1288 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 PHKBQ93100 1093 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 RNF26Q9BY78 433 aaPredicted RBP17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 EMILIN3Q9NT22 766 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 MORF4L1Q9UBU8 362 aa17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 RBBP6Q7Z6E9 1792 aaKnown RBP17.57■□□□□ 0.4
TMEM39A-203ENST00000461654 RAD21O60216 631 aa17.56■□□□□ 0.4
TMEM39A-203ENST00000461654 DTNBO60941 627 aa17.56■□□□□ 0.4
TMEM39A-203ENST00000461654 DEXIO95424 95 aa17.56■□□□□ 0.4
TMEM39A-203ENST00000461654 GRK4P32298 578 aa17.56■□□□□ 0.4
TMEM39A-203ENST00000461654 PRKCZQ05513 592 aa17.56■□□□□ 0.4
TMEM39A-203ENST00000461654 CCDC82Q8N4S0 544 aa17.56■□□□□ 0.4
TMEM39A-203ENST00000461654 PXYLP1Q8TE99 480 aa17.56■□□□□ 0.4
TMEM39A-203ENST00000461654 KIAA1683Q9H0B3 1180 aa17.56■□□□□ 0.4
TMEM39A-203ENST00000461654 KLRF2D3W0D1 207 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 PPFIA3O75145 1194 aa17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 ECM2O94769 699 aaPredicted RBP17.55■□□□□ 0.4
TMEM39A-203ENST00000461654 PLEKHA8P1O95397 391 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms