RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 DDR2Q16832 855 aa6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 NOL9Q5SY16 702 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 C6orf15Q6UXA7 325 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 TMC3Q7Z5M5 1100 aa6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 APBA2Q99767 749 aa6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 KLHL25Q9H0H3 589 aa6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 ATP13A1Q9HD20 1204 aa6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 DIS3Q9Y2L1 958 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 ZNF451Q9Y4E5 1061 aa6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
PRPF4B-202ENST00000461612 SHISA3A0PJX4 238 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 CBFA2T2O43439 604 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 PPM1BO75688 479 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 PRAMEF1O95521 474 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 IKZF1Q13422 519 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 SPRED2Q7Z698 418 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 WFDC3Q8IUB2 231 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 EPN3Q9H201 632 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 PAK6Q9NQU5 681 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 GFOD1Q9NXC2 390 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 DUSP13Q9UII6 198 aa6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 EIF4G3O43432 1585 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-202ENST00000461612 ARAP1Q96P48 1450 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 ESR1P03372 595 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 GSNP06396 782 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 EPHX1P07099 455 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 FUT4P22083 530 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 ZNF445P59923 1031 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 RNF111Q6ZNA4 994 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 NFXL1Q6ZNB6 911 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 EEPD1Q7L9B9 569 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 LRP10Q7Z4F1 713 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 CREG2Q8IUH2 290 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 CELF2-AS1Q8N7Q2 184 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 LINC00116Q8NCU8 138 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 MKL1Q969V6 931 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 TCTN2Q96GX1 697 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 CCDC120Q96HB5 630 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 RCC1LQ96I51 464 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 SUSD2Q9UGT4 822 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 SF3B6Q9Y3B4 125 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 SYNJ2O15056 1496 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 SNAPC4Q5SXM2 1469 aa6.73□□□□□ -1.33
PRPF4B-202ENST00000461612 WDR97A6NE52 1622 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 TARBP1Q13395 1621 aaKnown RBP6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 RBAK-RBAKDNI3L0D1 243 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 GJB6O95452 261 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 ZP2Q05996 745 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 SLC23A3Q6PIS1 610 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 ADAT2Q7Z6V5 191 aaKnown RBP6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 TP53INP2Q8IXH6 220 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 USHBP1Q8N6Y0 703 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 MICAL1Q8TDZ2 1067 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 DSCC1Q9BVC3 393 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 CCDC113Q9H0I3 377 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 ST7Q9NRC1 585 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 FAM86C1Q9NVL1 165 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 MSRB2Q9Y3D2 182 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 FGD5Q6ZNL6 1462 aa6.72□□□□□ -1.33
PRPF4B-202ENST00000461612 SYNJ1O43426 1573 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 SSU72P8A0A1W2PR75 194 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 WASH4PA8MWX3 477 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 ADAMTS4O75173 837 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 LTKP29376 864 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 BMP8BP34820 402 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 NOP2P46087 812 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 PCBP3P57721 371 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 EGR3Q06889 387 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 SERINC3Q13530 473 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 CWF19L1Q69YN2 538 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 ZNF574Q6ZN55 896 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 ARHGEF39Q8N4T4 335 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 CRACR2BQ8N4Y2 399 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 ZNF669Q96BR6 464 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 CARS2Q9HA77 564 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 GAPVD1Q14C86 1478 aa6.71□□□□□ -1.34
PRPF4B-202ENST00000461612 WRNQ14191 1432 aaPredicted RBP eCLIP6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 B2RBV5 119 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 SUSD5O60279 629 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 CD96P40200 585 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 GP2P55259 537 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 POU4F1Q01851 419 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 POMZP3Q6PJE2 187 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 NBPF11Q86T75 865 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 FIBCD1Q8N539 461 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 ZNF513Q8N8E2 541 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 ST13P5Q8NFI4 369 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 PI4K2BQ8TCG2 481 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 BRF1Q92994 677 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 SYTL4Q96C24 671 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 FGD4Q96M96 766 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 DNAJC2Q99543 621 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 SUGT1Q9Y2Z0 365 aa6.7□□□□□ -1.34
PRPF4B-202ENST00000461612 NOP56O00567 594 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-202ENST00000461612 TEKQ02763 1124 aa6.69□□□□□ -1.34
PRPF4B-202ENST00000461612 GRB10Q13322 594 aa6.69□□□□□ -1.34
PRPF4B-202ENST00000461612 RASGRF1Q13972 1273 aa6.69□□□□□ -1.34
PRPF4B-202ENST00000461612 PLCL1Q15111 1095 aa6.69□□□□□ -1.34
PRPF4B-202ENST00000461612 MRM1Q6IN84 353 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms